Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS3D01G544900.1 | Wheat | vacuole | 93.98 | 93.98 |
| TraesCS3B01G605200.1 | Wheat | vacuole | 89.35 | 89.35 |
| TraesCS1A01G055200.1 | Wheat | extracellular, plasma membrane, vacuole | 40.28 | 43.94 |
| GSMUA_Achr9P04190_001 | Banana | endoplasmic reticulum, plasma membrane | 36.57 | 41.58 |
| GSMUA_Achr6P33170_001 | Banana | plasma membrane | 36.11 | 39.0 |
| GSMUA_Achr8P02010_001 | Banana | extracellular | 35.65 | 38.5 |
| GSMUA_Achr8P02030_001 | Banana | extracellular | 35.65 | 38.5 |
| GSMUA_Achr8P02050_001 | Banana | extracellular | 35.19 | 38.0 |
| KRH52558 | Soybean | extracellular | 32.87 | 37.17 |
| KRH61896 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 32.87 | 36.41 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane, vacuole | 34.26 | 36.27 |
| Solyc08g074400.1.1 | Tomato | extracellular, plasma membrane | 29.17 | 34.43 |
| GSMUA_Achr6P15460_001 | Banana | cytosol, golgi, plasma membrane | 38.89 | 34.29 |
| CDY28245 | Canola | extracellular | 30.09 | 33.33 |
| Solyc08g006000.2.1 | Tomato | plastid | 30.09 | 33.33 |
| CDX68723 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 30.09 | 33.33 |
| Bra011248.1-P | Field mustard | extracellular | 30.09 | 33.33 |
| PGSC0003DMT400038484 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 30.09 | 33.33 |
| Bra010253.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 29.63 | 32.82 |
| CDY23278 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 29.63 | 32.82 |
| AT4G31130.1 | Thale cress | endoplasmic reticulum, extracellular | 29.63 | 32.82 |
| CDY51476 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 29.63 | 32.82 |
| PGSC0003DMT400076027 | Potato | extracellular, plasma membrane | 27.78 | 30.3 |
| KRG88894 | Soybean | extracellular | 28.24 | 29.9 |
| KRH16093 | Soybean | extracellular | 28.24 | 29.76 |
| VIT_04s0008g03090.t01 | Wine grape | extracellular | 27.78 | 29.41 |
| TraesCS1A01G290600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 23.61 | 26.84 |
| KRH05017 | Soybean | extracellular | 12.5 | 26.73 |
| VIT_04s0008g03100.t01 | Wine grape | plasma membrane | 30.56 | 17.32 |
Protein Annotations
| EnsemblPlants:TraesCS3A01G539400.1 | EnsemblPlantsGene:TraesCS3A01G539400 | InterPro:DUF1218 | PANTHER:PTHR31769 | PANTHER:PTHR31769:SF9 | PFAM:PF06749 |
| SEG:seg | TMHMM:TMhelix | MapMan:35.2 | : | : | : |
Description
No Description!
Coordinates
chr3A:+:750548102..750549076
Molecular Weight (calculated)
23491.5 Da
IEP (calculated)
6.504
GRAVY (calculated)
0.237
Length
216 amino acids
Sequence
(BLAST)
(BLAST)
001: MAASAWSKLA LLLCYFGLKA FVFGIVAENK KPQFGTGTVT GDGYVMCDFS RLSVVMGILS VISLLITILI GHRAVFYPYP TNKTNQQPAS VPRRALLRST
101: ILIVFFIVAE LVSVSALVML VGATKTQAAN LRYQLRIQPD GTMSCPSNTD KMDGHFGGGA LLALDAALIW FVCQLLALEA RANYLDRLPG DDEDYDDNNK
201: KHDGDNVASE DHSQLA
101: ILIVFFIVAE LVSVSALVML VGATKTQAAN LRYQLRIQPD GTMSCPSNTD KMDGHFGGGA LLALDAALIW FVCQLLALEA RANYLDRLPG DDEDYDDNNK
201: KHDGDNVASE DHSQLA
001: MAVSMKQMSL VVSALGVLSF VLGVIAENKK PASGTPISGK GVVICKYPSD PTVALGYLSA AFLLACTVAG YKSLFISYKG KSVPNSVLFK STSFSVFFNI
101: ALITSGLALS LLLWPTITEQ LHLTRNVHRN LETSCPTAKT GLLGGGAFVS LDSCLFWLVA LMLADNARED HFDEVESRSI DGNSSSRDVN LKIDA
101: ALITSGLALS LLLWPTITEQ LHLTRNVHRN LETSCPTAKT GLLGGGAFVS LDSCLFWLVA LMLADNARED HFDEVESRSI DGNSSSRDVN LKIDA
Arabidopsis Description
At4g31130 [Source:UniProtKB/TrEMBL;Acc:Q9M089]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.