Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 3
- plasma membrane 4
- golgi 3
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU1Hr1G071350.1 | Barley | plasma membrane | 84.74 | 84.74 |
| Os05t0465400-01 | Rice | endoplasmic reticulum, plasma membrane | 59.47 | 58.55 |
| TraesCS1A01G055200.1 | Wheat | extracellular, plasma membrane, vacuole | 42.63 | 40.91 |
| TraesCS3A01G539400.1 | Wheat | extracellular, plasma membrane, vacuole | 26.84 | 23.61 |
| OQU78155 | Sorghum | cytosol, plastid | 37.37 | 17.49 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G290600.1 | EnsemblPlantsGene:TraesCS1A01G290600 | InterPro:DUF1218 | PANTHER:PTHR31769 | PANTHER:PTHR31769:SF11 | PFAM:PF06749 |
| SEG:seg | SignalP:SignalP-noTM | TMHMM:TMhelix | MapMan:35.2 | : | : |
Description
No Description!
Coordinates
chr1A:-:487078614..487079353
Molecular Weight (calculated)
19897.1 Da
IEP (calculated)
7.339
GRAVY (calculated)
0.412
Length
190 amino acids
Sequence
(BLAST)
(BLAST)
001: MALRHSTRFR AVTAFLGVLS FVLAVVAELK KPPYRMPIRG ADVVVCRLPP DPTVALGALS ALAAACCAGI GAVSVFFPYD GRSIPRKALF DYTPCSTSSS
101: ISPCATVAGI GTTTWATATE AMHHVRNVHR NLGYACPTAE TGLLGAAAFL NLDASLFWLI CVMLVGNVTE DYFDGRDEIG GDGGAGIGEK
101: ISPCATVAGI GTTTWATATE AMHHVRNVHR NLGYACPTAE TGLLGAAAFL NLDASLFWLI CVMLVGNVTE DYFDGRDEIG GDGGAGIGEK
001: MAVSMKQMSL VVSALGVLSF VLGVIAENKK PASGTPISGK GVVICKYPSD PTVALGYLSA AFLLACTVAG YKSLFISYKG KSVPNSVLFK STSFSVFFNI
101: ALITSGLALS LLLWPTITEQ LHLTRNVHRN LETSCPTAKT GLLGGGAFVS LDSCLFWLVA LMLADNARED HFDEVESRSI DGNSSSRDVN LKIDA
101: ALITSGLALS LLLWPTITEQ LHLTRNVHRN LETSCPTAKT GLLGGGAFVS LDSCLFWLVA LMLADNARED HFDEVESRSI DGNSSSRDVN LKIDA
Arabidopsis Description
At4g31130 [Source:UniProtKB/TrEMBL;Acc:Q9M089]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.