Subcellular Localization
min:
: max
Winner_takes_all: plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 3
- mitochondrion 2
- cytosol 2
- nucleus 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Os05t0465400-01 | Rice | endoplasmic reticulum, plasma membrane | 19.95 | 41.97 |
| HORVU1Hr1G071350.1 | Barley | plasma membrane | 18.97 | 40.53 |
| TraesCS1A01G290600.1 | Wheat | endoplasmic reticulum, extracellular, plasma membrane | 17.49 | 37.37 |
| EES17623 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 14.78 | 30.77 |
Protein Annotations
| EnsemblPlants:OQU78155 | EnsemblPlantsGene:SORBI_3009G167201 | InterPro:DUF1218 | PANTHER:PTHR31769 | PANTHER:PTHR31769:SF11 | PFAM:PF06749 |
| ProteinID:OQU78155 | ProteinID:OQU78155.1 | SEG:seg | UniParc:UPI000B8B9D20 | UniProt:A0A1Z5R403 | MapMan:35.2 |
Description
hypothetical protein
Coordinates
chr9:-:52342092..52344327
Molecular Weight (calculated)
44107.9 Da
IEP (calculated)
12.134
GRAVY (calculated)
-0.541
Length
406 amino acids
Sequence
(BLAST)
(BLAST)
001: MAAIVSTDEA ARGRGAAACF APRRVTTQPT VPDDGMDMDR VRRVRRGPWP SHARRRRFPL ATCRALSFLL DALGHRPRHQ RQAGSRAGSS LSHCGVQGGG
101: GRAGLSEALC LRIKNAPVWA SDGLVQTCSA QFTPLNWGPH NSNHLNEGLQ LSRGTPTDQG CSCRTIFSPG RGPPIDRRRR HGSEPEHAAR PRHRAVRRAL
201: LRPRRPRRAQ ETAVRDADQG TGRRRLPVPA GPDGGAGGAV GAGRGVQRGA RRGRRLLPLR RQARAEEGAL RAHPALRLLP RRRVRRSTTV REARDRSILF
301: GHARVLRSLV GSLPCRGVTA AGAGTTVWAT ATEAMHHVRN VHRDMAYACP TAKTGVLGGA AFLNLDAMLF WIVCLMLARN VREDYFDVDH GGYGDDGVAG
401: TGIEEK
101: GRAGLSEALC LRIKNAPVWA SDGLVQTCSA QFTPLNWGPH NSNHLNEGLQ LSRGTPTDQG CSCRTIFSPG RGPPIDRRRR HGSEPEHAAR PRHRAVRRAL
201: LRPRRPRRAQ ETAVRDADQG TGRRRLPVPA GPDGGAGGAV GAGRGVQRGA RRGRRLLPLR RQARAEEGAL RAHPALRLLP RRRVRRSTTV REARDRSILF
301: GHARVLRSLV GSLPCRGVTA AGAGTTVWAT ATEAMHHVRN VHRDMAYACP TAKTGVLGGA AFLNLDAMLF WIVCLMLARN VREDYFDVDH GGYGDDGVAG
401: TGIEEK
001: MAVSMKQMSL VVSALGVLSF VLGVIAENKK PASGTPISGK GVVICKYPSD PTVALGYLSA AFLLACTVAG YKSLFISYKG KSVPNSVLFK STSFSVFFNI
101: ALITSGLALS LLLWPTITEQ LHLTRNVHRN LETSCPTAKT GLLGGGAFVS LDSCLFWLVA LMLADNARED HFDEVESRSI DGNSSSRDVN LKIDA
101: ALITSGLALS LLLWPTITEQ LHLTRNVHRN LETSCPTAKT GLLGGGAFVS LDSCLFWLVA LMLADNARED HFDEVESRSI DGNSSSRDVN LKIDA
Arabidopsis Description
At4g31130 [Source:UniProtKB/TrEMBL;Acc:Q9M089]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.