Factsheet for TraesCS3B01G605200.1

Subcellular Localization

min:

: max

Winner_takes_all: vacuole

Predictor Summary:

extracellular 4
endoplasmic reticulum 4
vacuole 6
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	vacuole
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G544900.1	Wheat	vacuole	89.81	89.81
TraesCS3A01G539400.1	Wheat	extracellular, plasma membrane, vacuole	89.35	89.35
TraesCS1B01G072000.1	Wheat	extracellular, plasma membrane, vacuole	41.2	44.95
GSMUA_Achr9P04190_001	Banana	endoplasmic reticulum, plasma membrane	37.04	42.11
GSMUA_Achr8P02010_001	Banana	extracellular	36.11	39.0
GSMUA_Achr8P02030_001	Banana	extracellular	36.11	39.0
GSMUA_Achr6P33170_001	Banana	plasma membrane	35.65	38.5
GSMUA_Achr8P02050_001	Banana	extracellular	35.65	38.5
KRH52558	Soybean	extracellular	32.41	36.65
KRH61896	Soybean	endoplasmic reticulum, extracellular, plasma membrane	32.87	36.41
GSMUA_AchrUn_...	Banana	endoplasmic reticulum, plasma membrane, vacuole	34.26	36.27
GSMUA_Achr6P15460_001	Banana	cytosol, golgi, plasma membrane	39.81	35.1
Os05t0465400-01	Rice	endoplasmic reticulum, plasma membrane	31.02	34.72
AT4G31130.1	Thale cress	endoplasmic reticulum, extracellular	30.09	33.33
Bra010253.1-P	Field mustard	endoplasmic reticulum, extracellular, plasma membrane	30.09	33.33
Solyc08g074400.1.1	Tomato	extracellular, plasma membrane	28.24	33.33
CDY23278	Canola	endoplasmic reticulum, extracellular, plasma membrane	30.09	33.33
CDY51476	Canola	endoplasmic reticulum, extracellular, plasma membrane	30.09	33.33
CDX68723	Canola	endoplasmic reticulum, extracellular, plasma membrane	29.63	32.82
PGSC0003DMT400038484	Potato	endoplasmic reticulum, extracellular, plasma membrane	29.63	32.82
Bra011248.1-P	Field mustard	extracellular	29.63	32.82
Solyc08g006000.2.1	Tomato	plastid	29.63	32.82
CDY28245	Canola	extracellular	29.63	32.82
VIT_04s0008g03090.t01	Wine grape	extracellular	27.78	29.41
KRG88894	Soybean	extracellular	27.78	29.41
KRH16093	Soybean	extracellular	27.78	29.27
PGSC0003DMT400076027	Potato	extracellular, plasma membrane	26.39	28.79
KRH05017	Soybean	extracellular	12.04	25.74
VIT_04s0008g03100.t01	Wine grape	plasma membrane	30.56	17.32

Protein Annotations

EnsemblPlants:TraesCS3B01G605200.1	EnsemblPlantsGene:TraesCS3B01G605200	InterPro:DUF1218	PANTHER:PTHR31769	PANTHER:PTHR31769:SF9	PFAM:PF06749
SEG:seg	TMHMM:TMhelix	MapMan:35.2	:	:	:

Description

No Description!

Coordinates

chr3B:+:823592606..823593467

Molecular Weight (calculated)

23466.8 Da

IEP (calculated)

6.506

GRAVY (calculated)

0.335

Length

216 amino acids

Sequence
(BLAST)

001: MAASAWSKLA LLLCYFGLKA FVFGIVAENK KPQFGTGTVI GDGYVMCEFS RLSVVMGILS VISLLIAILI GHRAVFYPYP TNRTSQQPAT VPRRALLRST
101: ILIVFFIIAE VVSVSALVML VKVTKAEAAN LRYQQPMQPD GTMSCPSMTG KMDGHFGGGA LLALDAALIW FVCQLLALEA RANYLDRLPG DDEEDEENNK
201: KHDGDIVASP DHSQLA

Best Arabidopsis Sequence Match ( AT4G31130.1 )
(BLAST)

001: MAVSMKQMSL VVSALGVLSF VLGVIAENKK PASGTPISGK GVVICKYPSD PTVALGYLSA AFLLACTVAG YKSLFISYKG KSVPNSVLFK STSFSVFFNI
101: ALITSGLALS LLLWPTITEQ LHLTRNVHRN LETSCPTAKT GLLGGGAFVS LDSCLFWLVA LMLADNARED HFDEVESRSI DGNSSSRDVN LKIDA

Arabidopsis Description

At4g31130 [Source:UniProtKB/TrEMBL;Acc:Q9M089]
SUBAcon: [endoplasmic reticulum,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.