Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 5
- endoplasmic reticulum 6
- vacuole 6
- plasma membrane 7
- golgi 5
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P02010_001 | Banana | extracellular | 59.8 | 61.0 |
| GSMUA_Achr8P02050_001 | Banana | extracellular | 59.8 | 61.0 |
| GSMUA_Achr8P02030_001 | Banana | extracellular | 59.31 | 60.5 |
| GSMUA_Achr6P33170_001 | Banana | plasma membrane | 58.82 | 60.0 |
| GSMUA_Achr9P04190_001 | Banana | endoplasmic reticulum, plasma membrane | 55.39 | 59.47 |
| Zm00001d035519_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 54.9 | 57.14 |
| EES17623 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 53.43 | 55.9 |
| TraesCS1D01G055900.1 | Wheat | extracellular, plasma membrane, vacuole | 53.43 | 55.05 |
| TraesCS1A01G055200.1 | Wheat | extracellular, plasma membrane, vacuole | 52.94 | 54.55 |
| TraesCS1B01G072000.1 | Wheat | extracellular, plasma membrane, vacuole | 52.45 | 54.04 |
| GSMUA_Achr6P15460_001 | Banana | cytosol, golgi, plasma membrane | 59.31 | 49.39 |
| KRH52558 | Soybean | extracellular | 44.12 | 47.12 |
| HORVU1Hr1G010940.3 | Barley | peroxisome | 54.41 | 46.44 |
| Solyc08g006000.2.1 | Tomato | plastid | 43.63 | 45.64 |
| KRH61896 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 42.65 | 44.62 |
| AT4G31130.1 | Thale cress | endoplasmic reticulum, extracellular | 42.16 | 44.1 |
| PGSC0003DMT400038484 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 42.16 | 44.1 |
| Solyc08g074400.1.1 | Tomato | extracellular, plasma membrane | 39.22 | 43.72 |
| KRH05017 | Soybean | extracellular | 21.08 | 42.57 |
| CDY28245 | Canola | extracellular | 40.69 | 42.56 |
| Bra011248.1-P | Field mustard | extracellular | 40.69 | 42.56 |
| Os05t0465400-01 | Rice | endoplasmic reticulum, plasma membrane | 40.2 | 42.49 |
| Bra010253.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 40.2 | 42.05 |
| CDY23278 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 40.2 | 42.05 |
| CDY51476 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 39.71 | 41.54 |
| CDX68723 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 39.71 | 41.54 |
| KRG88894 | Soybean | extracellular | 40.69 | 40.69 |
| VIT_04s0008g03090.t01 | Wine grape | extracellular | 40.69 | 40.69 |
| KRH16093 | Soybean | extracellular | 40.2 | 40.0 |
| PGSC0003DMT400076027 | Potato | extracellular, plasma membrane | 38.73 | 39.9 |
| TraesCS3A01G539400.1 | Wheat | extracellular, plasma membrane, vacuole | 36.27 | 34.26 |
| TraesCS3B01G605200.1 | Wheat | vacuole | 36.27 | 34.26 |
| TraesCS3D01G544900.1 | Wheat | vacuole | 34.8 | 32.87 |
| VIT_04s0008g03100.t01 | Wine grape | plasma membrane | 43.14 | 23.1 |
Protein Annotations
| EnsemblPlants:GSMUA_AchrUn_randomP10290_001 | EnsemblPlants:GSMUA_AchrUn_randomT10290_001 | EnsemblPlantsGene:GSMUA_AchrUn_randomG10290_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DUF1218 | PANTHER:PTHR31769 | PANTHER:PTHR31769:SF9 | PFAM:PF06749 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI0002964958 | UniProt:M0U7Y8 | MapMan:35.2 | : | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG10290_001]
Coordinates
chrchrUn_random:+:49821682..49823343
Molecular Weight (calculated)
22145.8 Da
IEP (calculated)
4.582
GRAVY (calculated)
0.484
Length
204 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFDQTTSIA LSVLFLGSVS FAFGIVAENK KACLMSQSGK DVIICNFPDD PTVLLGTSSV VTLILAAVAG HVAIYFPYKG KSVPSNALFQ NTILLPFFIV
101: AEGVTFIALA MLVWTTVSEG LHRSRNVHHD LTTRCPTAKT GLFGGGAFLA LDAAIFWLIC QMLTMNARSD YFNEDDPIVE YGEFNSVTDM ESIQQLRSEC
201: EVAL
101: AEGVTFIALA MLVWTTVSEG LHRSRNVHHD LTTRCPTAKT GLFGGGAFLA LDAAIFWLIC QMLTMNARSD YFNEDDPIVE YGEFNSVTDM ESIQQLRSEC
201: EVAL
001: MTTISDLPKE LVEEIISGVP TKLMRAVRGD NTRLVVWNPY IGQTRSIKLV KGWDTCSYAF GCLEKNKKSC RSHKILRFLD DDTLYNGRDN FRFKFLKVNT
101: GPEVSLVLES FIIDEEKKVV MVSEGFKHRI SYILGENGYL RELDLGESIY TNCWTQACSY VPSLVQLKQP AGGKRKLQSR ALRLVALDKR INK
101: GPEVSLVLES FIIDEEKKVV MVSEGFKHRI SYILGENGYL RELDLGESIY TNCWTQACSY VPSLVQLKQP AGGKRKLQSR ALRLVALDKR INK
Arabidopsis Description
F-box associated ubiquitination effector family protein [Source:UniProtKB/TrEMBL;Acc:F4J135]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.