Subcellular Localization
min:
: max
Winner_takes_all: extracellular
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 6
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| GSMUA_Achr8P02010_001 | Banana | extracellular | 99.0 | 99.0 |
| GSMUA_Achr8P02050_001 | Banana | extracellular | 98.5 | 98.5 |
| GSMUA_Achr9P04190_001 | Banana | endoplasmic reticulum, plasma membrane | 60.0 | 63.16 |
| EES17623 | Sorghum | endoplasmic reticulum, extracellular, plasma membrane | 59.5 | 61.03 |
| GSMUA_Achr6P33170_001 | Banana | plasma membrane | 61.0 | 61.0 |
| TraesCS1B01G072000.1 | Wheat | extracellular, plasma membrane, vacuole | 60.0 | 60.61 |
| TraesCS1A01G055200.1 | Wheat | extracellular, plasma membrane, vacuole | 60.0 | 60.61 |
| Zm00001d035519_P001 | Maize | endoplasmic reticulum, extracellular, plasma membrane | 59.0 | 60.2 |
| TraesCS1D01G055900.1 | Wheat | extracellular, plasma membrane, vacuole | 59.0 | 59.6 |
| GSMUA_AchrUn_... | Banana | endoplasmic reticulum, plasma membrane, vacuole | 60.5 | 59.31 |
| GSMUA_Achr6P15460_001 | Banana | cytosol, golgi, plasma membrane | 63.5 | 51.84 |
| HORVU1Hr1G010940.3 | Barley | peroxisome | 60.0 | 50.21 |
| Os05t0465400-01 | Rice | endoplasmic reticulum, plasma membrane | 46.5 | 48.19 |
| KRH52558 | Soybean | extracellular | 45.5 | 47.64 |
| KRH61896 | Soybean | endoplasmic reticulum, extracellular, plasma membrane | 46.0 | 47.18 |
| Bra010253.1-P | Field mustard | endoplasmic reticulum, extracellular, plasma membrane | 44.0 | 45.13 |
| Solyc08g006000.2.1 | Tomato | plastid | 44.0 | 45.13 |
| CDY23278 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 44.0 | 45.13 |
| Solyc08g074400.1.1 | Tomato | extracellular, plasma membrane | 41.0 | 44.81 |
| AT4G31130.1 | Thale cress | endoplasmic reticulum, extracellular | 43.5 | 44.62 |
| PGSC0003DMT400038484 | Potato | endoplasmic reticulum, extracellular, plasma membrane | 43.5 | 44.62 |
| KRH05017 | Soybean | extracellular | 22.5 | 44.55 |
| CDY51476 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 43.0 | 44.1 |
| CDY28245 | Canola | extracellular | 43.0 | 44.1 |
| Bra011248.1-P | Field mustard | extracellular | 43.0 | 44.1 |
| PGSC0003DMT400076027 | Potato | extracellular, plasma membrane | 42.5 | 42.93 |
| CDX68723 | Canola | endoplasmic reticulum, extracellular, plasma membrane | 41.5 | 42.56 |
| KRH16093 | Soybean | extracellular | 41.5 | 40.49 |
| KRG88894 | Soybean | extracellular | 41.0 | 40.2 |
| VIT_04s0008g03090.t01 | Wine grape | extracellular | 40.5 | 39.71 |
| TraesCS3B01G605200.1 | Wheat | vacuole | 39.0 | 36.11 |
| TraesCS3A01G539400.1 | Wheat | extracellular, plasma membrane, vacuole | 38.5 | 35.65 |
| TraesCS3D01G544900.1 | Wheat | vacuole | 36.5 | 33.8 |
| VIT_04s0008g03100.t01 | Wine grape | plasma membrane | 46.0 | 24.15 |
Protein Annotations
| EnsemblPlants:GSMUA_Achr8P02030_001 | EnsemblPlants:GSMUA_Achr8T02030_001 | EnsemblPlantsGene:GSMUA_Achr8G02030_001 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 |
| InterPro:DUF1218 | PANTHER:PTHR31769 | PANTHER:PTHR31769:SF9 | PFAM:PF06749 | SEG:seg | TMHMM:TMhelix |
| UniParc:UPI000296E016 | UniProt:M0TLV5 | MapMan:35.2 | : | : | : |
Description
expressed protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G02030_001]
Coordinates
chr8:-:1504732..1505561
Molecular Weight (calculated)
21632.3 Da
IEP (calculated)
6.086
GRAVY (calculated)
0.529
Length
200 amino acids
Sequence
(BLAST)
(BLAST)
001: MAFSQTARIG ACVFCLGFIS FLLAIFAETS KPPFGTPIQA KNAVICKFPD DPSILLGTLS VVTLVLAAIA GHVAVYFPYK GKSVPRNALF RSATLSTFFV
101: LAEVLTVLAL VMLLWTTISE SLHRSRNVHR DLTTQCPTAK TGLFGGGAFL ALDAALFWLV CQMLTLNARS DYLDEDDTKG EYVDVCTTEF DVAEGHLPTA
101: LAEVLTVLAL VMLLWTTISE SLHRSRNVHR DLTTQCPTAK TGLFGGGAFL ALDAALFWLV CQMLTLNARS DYLDEDDTKG EYVDVCTTEF DVAEGHLPTA
001: MAVSMKQMSL VVSALGVLSF VLGVIAENKK PASGTPISGK GVVICKYPSD PTVALGYLSA AFLLACTVAG YKSLFISYKG KSVPNSVLFK STSFSVFFNI
101: ALITSGLALS LLLWPTITEQ LHLTRNVHRN LETSCPTAKT GLLGGGAFVS LDSCLFWLVA LMLADNARED HFDEVESRSI DGNSSSRDVN LKIDA
101: ALITSGLALS LLLWPTITEQ LHLTRNVHRN LETSCPTAKT GLLGGGAFVS LDSCLFWLVA LMLADNARED HFDEVESRSI DGNSSSRDVN LKIDA
Arabidopsis Description
At4g31130 [Source:UniProtKB/TrEMBL;Acc:Q9M089]
SUBAcon: [endoplasmic reticulum,extracellular]
SUBAcon: [endoplasmic reticulum,extracellular]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.