CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:

plastid 2
mitochondrion 3
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra016625.1-P	Field mustard	mitochondrion	97.9	98.07
CDX83935	Canola	mitochondrion	97.9	98.07
CDY40024	Canola	mitochondrion	94.22	94.55
CDY35127	Canola	mitochondrion	93.7	94.02
AT1G16900.1	Thale cress	cytosol, mitochondrion, plasma membrane, plastid	91.42	91.58
VIT_19s0014g01410.t01	Wine grape	cytosol, mitochondrion, nucleus, peroxisome	74.26	74.39
KRH21979	Soybean	endoplasmic reticulum	73.03	73.94
KRH27341	Soybean	cytosol, nucleus, peroxisome	72.5	73.4
Solyc07g062540.2.1	Tomato	cytosol, nucleus, plasma membrane	72.15	72.41
PGSC0003DMT400032246	Potato	cytosol, nucleus, plasma membrane	71.98	72.23
GSMUA_Achr6P14480_001	Banana	peroxisome	68.13	67.65
Os01t0209000-01	Rice	cytosol, mitochondrion, nucleus, plasma membrane	67.25	67.13
EES02272	Sorghum	mitochondrion, nucleus, peroxisome, plasma membrane	66.9	66.55
TraesCS3B01G167800.1	Wheat	golgi	67.08	64.92
TraesCS3A01G134100.2	Wheat	golgi	66.55	64.52
TraesCS3D01G150400.1	Wheat	plasma membrane	66.55	64.41
HORVU3Hr1G029160.1	Barley	mitochondrion	66.37	64.24
Zm00001d039403_P003	Maize	plasma membrane	66.9	63.56

Protein Annotations

EnsemblPlants:CDX96801	EnsemblPlantsGene:GSBRNA2T00103034001	GO:A0A078E6E1	GO:GO:0003674	GO:GO:0003824	GO:GO:0016740
GO:GO:0016757	InterPro:GPI_mannosylTrfase	PANTHER:PTHR22760	PANTHER:PTHR22760:SF2	PFAM:PF03901	ProteinID:CDX96801
ProteinID:CDX96801.1	SEG:seg	TMHMM:TMhelix	UniParc:UPI0004EE0F93	MapMan:18.1.1.4.8	:

Description

BnaA08g23440D

Coordinates

chrLK031895:+:1015390..1018503

Molecular Weight (calculated)

65137.0 Da

IEP (calculated)

9.111

GRAVY (calculated)

0.193

Length

571 amino acids

Sequence
(BLAST)

001: MDLTTTTTRQ RRPLLSGSTS SSTKPYSKTD KPRRSDGGDA EDRGLGWFLP FIALCYLRYM SATSNIVHDC DEVFNYWEPL HYLLYKSGFQ TWEYSSNFAL
101: RSYLYILFHE LAGRPASWWF GDDKVRVFYA VRLFLGLLSA VSDTVLVVAL SRKYGKRIAT YAVAMLCLTS GCFFASTSFL PSSFSMYAMS LSSGLLLFEK
201: YAMAVAVSVF GVILGWPFSI LAFLPVVIYA LVKRFKQAFI SGAATSIFLL GLSVLVDHYY YKRWTSSVLN LLIYNVLGGG ESHLYGTEGP LFYMKNGFNN
301: FNLGFVLAIL FIALFPVIRR KYDRCLLVVI SPMYIWLAFM SLQPHKEERF LYPIYPLICV SASVVIENIP ELFREKYSTR ESLLVTITKY IRPVILGLIL
401: CASHARTFSL INGYSAPLEV YKLLEHHDDA GPGSVLCVGS EWHRYPSSFF VPDYISEVRW IDDGFRGLLP FPFNSTLGGT AASPSYFNNK NQASDEQFLK
501: NIETCTFLIE LQLSRPYAYR GSDLSTWEAI AVLPYLDREL SPAKYRSFFI PYKWQEKNVF GKYVILRRVP K

Best Arabidopsis Sequence Match ( AT1G16900.1 )
(BLAST)

001: MDLTTTRQRR PLISDSSSSS STKSYSKTDK PGRSNGGDAE DGGLRWFLPF IALCYLRYMS ATSNIIHDCD EVFNYWEPLH YILYKSGFQT WEYSSNFALR
101: SYLYILFHEL AGRPASWWFG DDKVRVFYAV RLFLGLVSAV SDTVLVVALS RKYGKRIATY AVAMLCLTSG CFFASTSFLP SSFSMYAISL SSGLLLFEKY
201: AMAVAVSVVG VILGWPFSIL AFLPVVIYSL VKRFKQAFIA GAVTTIFLLG VSLLVDYYYY KRWTSSVLNL LIYNVLGGGE SHLYGTEGAL FYIRNGFNNF
301: NFCFILAMLF VAIYPVIRRK YDRALLVVIS PMYIWLAFMS LQPHKEERFL YPIYPLICVS ASAVIENIPE LFREKYSSRE SLLVTITKYM RPVILGCILC
401: ASHSRTFALI NGYSAPLEVY KLLEHHDDAG PGSVLCVGSE WHRYPSSFFV PHYISEVRWI DDGFRGLLPF PFNNTLGGTS ASPPYFNNKN QASEEQYLKN
501: IETCTFLIEL QLSRPYQYRG SDLSTWEAIA VLPYLDRELS PAKYRSFFIP HMWQEKNVFG KYVALRRVPK

Arabidopsis Description

ALG9Dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ49]
SUBAcon: [mitochondrion,plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.