Factsheet for Bra016625.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 5
golgi 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX83935	Canola	mitochondrion	98.25	98.25
CDX96801	Canola	cytosol, mitochondrion, nucleus, plastid	98.07	97.9
Bra026017.1-P	Field mustard	mitochondrion	93.33	93.5
AT1G16900.1	Thale cress	cytosol, mitochondrion, plasma membrane, plastid	91.23	91.23
VIT_19s0014g01410.t01	Wine grape	cytosol, mitochondrion, nucleus, peroxisome	74.04	74.04
KRH21979	Soybean	endoplasmic reticulum	72.98	73.76
KRH27341	Soybean	cytosol, nucleus, peroxisome	72.46	73.23
PGSC0003DMT400032246	Potato	cytosol, nucleus, plasma membrane	71.58	71.7
Solyc07g062540.2.1	Tomato	cytosol, nucleus, plasma membrane	71.4	71.53
GSMUA_Achr6P14480_001	Banana	peroxisome	68.95	68.35
Os01t0209000-01	Rice	cytosol, mitochondrion, nucleus, plasma membrane	67.37	67.13
EES02272	Sorghum	mitochondrion, nucleus, peroxisome, plasma membrane	66.67	66.2
TraesCS3B01G167800.1	Wheat	golgi	67.02	64.75
TraesCS3A01G134100.2	Wheat	golgi	66.49	64.35
TraesCS3D01G150400.1	Wheat	plasma membrane	66.49	64.24
HORVU3Hr1G029160.1	Barley	mitochondrion	65.96	63.73
Zm00001d039403_P003	Maize	plasma membrane	66.67	63.23

Protein Annotations

MapMan:18.1.1.4.8	EnsemblPlantsGene:Bra016625	EnsemblPlants:Bra016625.1	EnsemblPlants:Bra016625.1-P	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005789
GO:GO:0016020	GO:GO:0016021	GO:GO:0016740	GO:GO:0016757	InterPro:GPI_mannosylTrfase	UniProt:M4DJE7
PFAM:PF03901	PANTHER:PTHR22760	PANTHER:PTHR22760:SF2	TMHMM:TMhelix	UniParc:UPI00025456D3	SEG:seg

Description

AT1G16900 (E=6e-286) | sugar binding / transferase, transferring glycosyl groups

Coordinates

chrA08:+:19331031..19333839

Molecular Weight (calculated)

65026.9 Da

IEP (calculated)

9.111

GRAVY (calculated)

0.194

Length

570 amino acids

Sequence
(BLAST)

001: MDLTTTTRQR RPLLSGSSSS SAKPYSKTDK PRRSDGGDAE DRGLGWFLPF IALCYLRYMS ATSNIVHDCD EVFNYWEPLH YLLYKSGFQT WEYSSNFALR
101: SYLYILFHEL AGRPASWWFG DDKVRVFYAV RLFLGLVSAV SDTVLVVALS RKYGKRIATY AVAMLCLTSG CFFASTSFLP SSFSMYAMSL SSGLLLFEKY
201: AMAVAVSVFG VILGWPFSIL AFLPIVVYAL VKRFKQAFIS GAATSIFLLG LSVLVDHYYY KRWTSSVLNL LIYNVLGGGE SHLYGTEGPL FYIKNGFNNF
301: NLGFVLAILF IALFPIIRRK YDRCLLVVIS PMYIWLAFMS LQPHKEERFL YPIYPLICVS ASVVIENIPE LFREKYSTRE SLLVTITKYI RPVILGLILC
401: ASHARTFSLI NGYSAPLEVY KLLEHHDDAG PGSVLCVGSE WHRYPSSFFV PDYISEVRWI DDGFRGLLPF PFNSTLGGTA ASPPYFNNKN QASDEQFLKN
501: IESCTFLIEL QLSRPYTYRG NDLSTWEAIA VLPYLDRELS PAKYRSFFIP YKWQEKNVFG KYVILRRVPK

Best Arabidopsis Sequence Match ( AT1G16900.1 )
(BLAST)

001: MDLTTTRQRR PLISDSSSSS STKSYSKTDK PGRSNGGDAE DGGLRWFLPF IALCYLRYMS ATSNIIHDCD EVFNYWEPLH YILYKSGFQT WEYSSNFALR
101: SYLYILFHEL AGRPASWWFG DDKVRVFYAV RLFLGLVSAV SDTVLVVALS RKYGKRIATY AVAMLCLTSG CFFASTSFLP SSFSMYAISL SSGLLLFEKY
201: AMAVAVSVVG VILGWPFSIL AFLPVVIYSL VKRFKQAFIA GAVTTIFLLG VSLLVDYYYY KRWTSSVLNL LIYNVLGGGE SHLYGTEGAL FYIRNGFNNF
301: NFCFILAMLF VAIYPVIRRK YDRALLVVIS PMYIWLAFMS LQPHKEERFL YPIYPLICVS ASAVIENIPE LFREKYSSRE SLLVTITKYM RPVILGCILC
401: ASHSRTFALI NGYSAPLEVY KLLEHHDDAG PGSVLCVGSE WHRYPSSFFV PHYISEVRWI DDGFRGLLPF PFNNTLGGTS ASPPYFNNKN QASEEQYLKN
501: IETCTFLIEL QLSRPYQYRG SDLSTWEAIA VLPYLDRELS PAKYRSFFIP HMWQEKNVFG KYVALRRVPK

Arabidopsis Description

ALG9Dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ49]
SUBAcon: [mitochondrion,plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.