CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, nucleus, plasma membrane

Predictor Summary:

nucleus 2
peroxisome 1
golgi 1
mitochondrion 2
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d039403_P003	Maize	plasma membrane	96.86	92.51
Os01t0209000-01	Rice	cytosol, mitochondrion, nucleus, plasma membrane	90.42	90.73
TraesCS3B01G167800.1	Wheat	golgi	87.11	84.75
TraesCS3D01G150400.1	Wheat	plasma membrane	86.76	84.41
HORVU3Hr1G029160.1	Barley	mitochondrion	86.41	84.07
TraesCS3A01G134100.2	Wheat	golgi	86.06	83.87
GSMUA_Achr6P14480_001	Banana	peroxisome	74.22	74.09
VIT_19s0014g01410.t01	Wine grape	cytosol, mitochondrion, nucleus, peroxisome	69.69	70.18
Solyc07g062540.2.1	Tomato	cytosol, nucleus, plasma membrane	68.99	69.6
PGSC0003DMT400032246	Potato	cytosol, nucleus, plasma membrane	68.82	69.42
KRH21979	Soybean	endoplasmic reticulum	67.94	69.15
KRH27341	Soybean	cytosol, nucleus, peroxisome	67.6	68.79
AT1G16900.1	Thale cress	cytosol, mitochondrion, plasma membrane, plastid	67.07	67.54
CDX83935	Canola	mitochondrion	66.55	67.02
CDX96801	Canola	cytosol, mitochondrion, nucleus, plastid	66.55	66.9
CDY40024	Canola	mitochondrion	66.2	66.78
CDY35127	Canola	mitochondrion	66.2	66.78
Bra026017.1-P	Field mustard	mitochondrion	66.2	66.78
Bra016625.1-P	Field mustard	mitochondrion	66.2	66.67

Protein Annotations

MapMan:18.1.1.4.8	EntrezGene:8081425	UniProt:C5XL51	EnsemblPlants:EES02272	ProteinID:EES02272	ProteinID:EES02272.1
GO:GO:0000026	GO:GO:0000030	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0005789	GO:GO:0006950	GO:GO:0008150
GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016740
GO:GO:0016757	GO:GO:0019538	GO:GO:0030433	GO:GO:0097502	InterPro:GPI_mannosylTrfase	PFAM:PF03901
PANTHER:PTHR22760	PANTHER:PTHR22760:SF2	EnsemblPlantsGene:SORBI_3003G023300	unigene:Sbi.8008	TMHMM:TMhelix	UniParc:UPI0001A84EF3
RefSeq:XP_002457152.1	SEG:seg	:	:	:	:

Description

hypothetical protein

Coordinates

chr3:-:2001235..2006770

Molecular Weight (calculated)

64884.3 Da

IEP (calculated)

8.590

GRAVY (calculated)

0.223

Length

574 amino acids

Sequence
(BLAST)

001: MSLSSARQRR ATAASPPTDD GYAKDAKDRR RRPGGDGDGE DEGIKWFLPF LALGLLRHMS ASSNLIHDCD EVFNYWEPLH FLLYRSGFQT WEYSSDFALR
101: SYLYLFFHAL VAGPASLIFG ENKVRVFYSL RIFLGLISTI TETVLVVALS RRYGKRLACY VLAMLCLSSG CFFASTSFLP SSFSMYAVTL SSALFLLEKY
201: AGAVSVAAAG VILGWPFSIL VFLPVTVYSL IRGSFRRVFL SGFFTSLCFL VLSFVADYYC YGRLTFSVFN LLKYNVLGGG ESHLYGTEGL SFYFRNGFNN
301: FNFAFILALL FLVVVPFARK KYAPDLLIVV SPVYIWLAFM SLQAHKEERF LYPIYTLICV AAAAVIDSLP DLFHDKYSSD QSIFEKIAKG LRPLILGFIL
401: CASHSRTFSM LNGYGAPLQI YQHLEHHDDT GPGSILCVGS EWHRYPSSFF IPSYISEVRW IDDGFRGLLP FPFNETLGGT TAAPSYFNNK NKAAEGQYLK
501: DIGACTLLVE LDLRRPYPSR GSDLSKWEAL AALQFLDREL SPALYRSFFI PYRWQQNNVF GLYKLLRRLH PDHA

Best Arabidopsis Sequence Match ( AT1G16900.1 )
(BLAST)

001: MDLTTTRQRR PLISDSSSSS STKSYSKTDK PGRSNGGDAE DGGLRWFLPF IALCYLRYMS ATSNIIHDCD EVFNYWEPLH YILYKSGFQT WEYSSNFALR
101: SYLYILFHEL AGRPASWWFG DDKVRVFYAV RLFLGLVSAV SDTVLVVALS RKYGKRIATY AVAMLCLTSG CFFASTSFLP SSFSMYAISL SSGLLLFEKY
201: AMAVAVSVVG VILGWPFSIL AFLPVVIYSL VKRFKQAFIA GAVTTIFLLG VSLLVDYYYY KRWTSSVLNL LIYNVLGGGE SHLYGTEGAL FYIRNGFNNF
301: NFCFILAMLF VAIYPVIRRK YDRALLVVIS PMYIWLAFMS LQPHKEERFL YPIYPLICVS ASAVIENIPE LFREKYSSRE SLLVTITKYM RPVILGCILC
401: ASHSRTFALI NGYSAPLEVY KLLEHHDDAG PGSVLCVGSE WHRYPSSFFV PHYISEVRWI DDGFRGLLPF PFNNTLGGTS ASPPYFNNKN QASEEQYLKN
501: IETCTFLIEL QLSRPYQYRG SDLSTWEAIA VLPYLDRELS PAKYRSFFIP HMWQEKNVFG KYVALRRVPK

Arabidopsis Description

ALG9Dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ49]
SUBAcon: [mitochondrion,plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.