Factsheet for TraesCS3B01G167800.1

Subcellular Localization

min:

: max

Winner_takes_all: golgi

Predictor Summary:

peroxisome 1
mitochondrion 2
plasma membrane 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi
Any Predictor:	mitochondrion, peroxisome, plasma membrane
MultiLoc:	peroxisome
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

golgi: 25769308

msms PMID: 25769308 doi

AL Chateigner-Boutin, M Suliman, B Bouchet, C Alvarado, V Lollier, H Rogniaux, F Guillon, C Larré

INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France colette.larre@nantes.inra.fr., INRA, UR1268 Biopolymères, Interactions Assemblages, F-44316 Nantes, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G150400.1	Wheat	plasma membrane	99.49	99.49
HORVU3Hr1G029160.1	Barley	mitochondrion	97.8	97.8
TraesCS3A01G134100.2	Wheat	golgi	96.61	96.77
Os01t0209000-01	Rice	cytosol, mitochondrion, nucleus, plasma membrane	86.61	89.34
EES02272	Sorghum	mitochondrion, nucleus, peroxisome, plasma membrane	84.75	87.11
Zm00001d039403_P003	Maize	plasma membrane	85.59	84.03
GSMUA_Achr6P14480_001	Banana	peroxisome	72.2	74.09
VIT_19s0014g01410.t01	Wine grape	cytosol, mitochondrion, nucleus, peroxisome	68.31	70.7
Solyc07g062540.2.1	Tomato	cytosol, nucleus, plasma membrane	66.95	69.42
PGSC0003DMT400032246	Potato	cytosol, nucleus, plasma membrane	66.78	69.24
KRH27341	Soybean	cytosol, nucleus, peroxisome	66.1	69.15
KRH21979	Soybean	endoplasmic reticulum	65.93	68.97
CDX96801	Canola	cytosol, mitochondrion, nucleus, plastid	64.92	67.08
Bra016625.1-P	Field mustard	mitochondrion	64.75	67.02
CDY35127	Canola	mitochondrion	64.58	66.96
Bra026017.1-P	Field mustard	mitochondrion	64.58	66.96
CDX83935	Canola	mitochondrion	64.58	66.84
AT1G16900.1	Thale cress	cytosol, mitochondrion, plasma membrane, plastid	64.58	66.84
CDY40024	Canola	mitochondrion	64.24	66.61

Protein Annotations

MapMan:18.1.1.4.8	GO:GO:0000026	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005783	GO:GO:0006950	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016740	GO:GO:0016757	GO:GO:0019538	GO:GO:0030433
InterPro:GPI_mannosylTrfase	PFAM:PF03901	PANTHER:PTHR22760	PANTHER:PTHR22760:SF2	TMHMM:TMhelix	EnsemblPlantsGene:TraesCS3B01G167800
EnsemblPlants:TraesCS3B01G167800.1	SEG:seg	:	:	:	:

Description

No Description!

Coordinates

chr3B:-:168266805..168275347

Molecular Weight (calculated)

66563.2 Da

IEP (calculated)

8.691

GRAVY (calculated)

0.166

Length

590 amino acids

Sequence
(BLAST)

001: MSLSSARQRR PTAASPLTDD GYSKEAKERR RRTDGEEVEE GIRWFLPFLA LGLLRHMSAS SNLIHDCDEV FNYWEPLHFL LYRSGFQTWE YSSDHALRSY
101: LYLFIHGLVA GPASSIFGGE HKVRVFYAVR IFLGLLSTIT ETVLVVALSR RYGKRLACYV LAMLCLTSGC FFASTSFLPS SFSMYAVTLS SALFLLEKYA
201: CAVSVAAAGV ILGWPFSILV FLPVTVYSLL RGHFKRVFLS GLLTSLCLLV LSVVADYYSY GRWTSSVFNL LKYNVLGGGE SHLYGTEGAS FYFRNAFNNF
301: NFAFVLALLF VGVALSARKK YAPDLLIVVS PVYIWLAFMS LQAHKEERFL YPIYPLICVA AASVIDSFPY FFHDKYANEQ SIFEKIAKGL RPLILGFILC
401: TSHSRTFSML NGYGAPLQIY QHLEYHEDTG PGSILCVGSE WHRYPSSFFV PSYISEVRWI DDGFRGLLPF PFNETLGGTT AAPSYFNTKN KASDKQYLKD
501: IGACNLLMEL DLRRPYPSRG NDLSTWETLA SLPFLDRELS PALYRSFFIP YQWEHKNVFG LYKLLRRLPT DQGQLKANSS GGHAAFASVS

Best Arabidopsis Sequence Match ( AT1G16900.1 )
(BLAST)

001: MDLTTTRQRR PLISDSSSSS STKSYSKTDK PGRSNGGDAE DGGLRWFLPF IALCYLRYMS ATSNIIHDCD EVFNYWEPLH YILYKSGFQT WEYSSNFALR
101: SYLYILFHEL AGRPASWWFG DDKVRVFYAV RLFLGLVSAV SDTVLVVALS RKYGKRIATY AVAMLCLTSG CFFASTSFLP SSFSMYAISL SSGLLLFEKY
201: AMAVAVSVVG VILGWPFSIL AFLPVVIYSL VKRFKQAFIA GAVTTIFLLG VSLLVDYYYY KRWTSSVLNL LIYNVLGGGE SHLYGTEGAL FYIRNGFNNF
301: NFCFILAMLF VAIYPVIRRK YDRALLVVIS PMYIWLAFMS LQPHKEERFL YPIYPLICVS ASAVIENIPE LFREKYSSRE SLLVTITKYM RPVILGCILC
401: ASHSRTFALI NGYSAPLEVY KLLEHHDDAG PGSVLCVGSE WHRYPSSFFV PHYISEVRWI DDGFRGLLPF PFNNTLGGTS ASPPYFNNKN QASEEQYLKN
501: IETCTFLIEL QLSRPYQYRG SDLSTWEAIA VLPYLDRELS PAKYRSFFIP HMWQEKNVFG KYVALRRVPK

Arabidopsis Description

ALG9Dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ49]
SUBAcon: [mitochondrion,plasma membrane,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.