Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, plasma membrane, plastid, cytosol
Predictor Summary:
Predictor Summary:
- plastid 2
- cytosol 1
- mitochondrion 2
- plasma membrane 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY35127 | Canola | mitochondrion | 91.75 | 91.92 |
| CDY40024 | Canola | mitochondrion | 91.75 | 91.92 |
| CDX96801 | Canola | cytosol, mitochondrion, nucleus, plastid | 91.58 | 91.42 |
| Bra026017.1-P | Field mustard | mitochondrion | 91.23 | 91.39 |
| Bra016625.1-P | Field mustard | mitochondrion | 91.23 | 91.23 |
| CDX83935 | Canola | mitochondrion | 90.88 | 90.88 |
| VIT_19s0014g01410.t01 | Wine grape | cytosol, mitochondrion, nucleus, peroxisome | 74.21 | 74.21 |
| KRH21979 | Soybean | endoplasmic reticulum | 72.81 | 73.58 |
| KRH27341 | Soybean | cytosol, nucleus, peroxisome | 71.93 | 72.69 |
| Solyc07g062540.2.1 | Tomato | cytosol, nucleus, plasma membrane | 71.58 | 71.7 |
| PGSC0003DMT400032246 | Potato | cytosol, nucleus, plasma membrane | 71.4 | 71.53 |
| GSMUA_Achr6P14480_001 | Banana | peroxisome | 69.3 | 68.7 |
| Os01t0209000-01 | Rice | cytosol, mitochondrion, nucleus, plasma membrane | 67.37 | 67.13 |
| EES02272 | Sorghum | mitochondrion, nucleus, peroxisome, plasma membrane | 67.54 | 67.07 |
| TraesCS3B01G167800.1 | Wheat | golgi | 66.84 | 64.58 |
| Zm00001d039403_P003 | Maize | plasma membrane | 67.72 | 64.23 |
| TraesCS3D01G150400.1 | Wheat | plasma membrane | 66.32 | 64.07 |
| TraesCS3A01G134100.2 | Wheat | golgi | 66.14 | 64.01 |
| HORVU3Hr1G029160.1 | Barley | mitochondrion | 66.14 | 63.9 |
Protein Annotations
| MapMan:18.1.1.4.8 | EntrezGene:838261 | ProteinID:AAF99843.1 | ProteinID:AEE29518.1 | ArrayExpress:AT1G16900 | EnsemblPlantsGene:AT1G16900 |
| RefSeq:AT1G16900 | TAIR:AT1G16900 | RefSeq:AT1G16900-TAIR-G | EnsemblPlants:AT1G16900.1 | TAIR:AT1G16900.1 | EMBL:AY140061 |
| Unigene:At.41864 | EMBL:BT010395 | GO:GO:0000026 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004377 |
| GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005783 | GO:GO:0005789 |
| GO:GO:0005975 | GO:GO:0006464 | GO:GO:0006486 | GO:GO:0006490 | GO:GO:0006629 | GO:GO:0006950 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009056 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0016020 |
| GO:GO:0016021 | GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | GO:GO:0016757 | GO:GO:0019538 |
| GO:GO:0030433 | GO:GO:0052918 | GO:GO:0052926 | GO:GO:0097502 | InterPro:GPI_mannosylTrfase | EMBL:KJ139003 |
| RefSeq:NP_173134.2 | PFAM:PF03901 | PO:PO:0000013 | PO:PO:0000037 | PO:PO:0000230 | PO:PO:0000293 |
| PO:PO:0001017 | PO:PO:0001054 | PO:PO:0001078 | PO:PO:0001081 | PO:PO:0001185 | PO:PO:0004507 |
| PO:PO:0007064 | PO:PO:0007095 | PO:PO:0007098 | PO:PO:0007103 | PO:PO:0007115 | PO:PO:0007123 |
| PO:PO:0007611 | PO:PO:0007616 | PO:PO:0008019 | PO:PO:0009005 | PO:PO:0009006 | PO:PO:0009009 |
| PO:PO:0009010 | PO:PO:0009025 | PO:PO:0009029 | PO:PO:0009030 | PO:PO:0009031 | PO:PO:0009032 |
| PO:PO:0009046 | PO:PO:0009047 | PO:PO:0009052 | PO:PO:0020030 | PO:PO:0020038 | PO:PO:0020100 |
| PO:PO:0020137 | PO:PO:0025022 | PO:PO:0025281 | PANTHER:PTHR22760 | PANTHER:PTHR22760:SF2 | UniProt:Q9FZ49 |
| TMHMM:TMhelix | UniParc:UPI000009FAAB | UniProt:W8QPA0 | SEG:seg | : | : |
Description
ALG9Dol-P-Man:Man(6)GlcNAc(2)-PP-Dol alpha-1,2-mannosyltransferase [Source:UniProtKB/Swiss-Prot;Acc:Q9FZ49]
Coordinates
chr1:-:5779008..5782433
Molecular Weight (calculated)
65086.8 Da
IEP (calculated)
8.951
GRAVY (calculated)
0.181
Length
570 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLTTTRQRR PLISDSSSSS STKSYSKTDK PGRSNGGDAE DGGLRWFLPF IALCYLRYMS ATSNIIHDCD EVFNYWEPLH YILYKSGFQT WEYSSNFALR
101: SYLYILFHEL AGRPASWWFG DDKVRVFYAV RLFLGLVSAV SDTVLVVALS RKYGKRIATY AVAMLCLTSG CFFASTSFLP SSFSMYAISL SSGLLLFEKY
201: AMAVAVSVVG VILGWPFSIL AFLPVVIYSL VKRFKQAFIA GAVTTIFLLG VSLLVDYYYY KRWTSSVLNL LIYNVLGGGE SHLYGTEGAL FYIRNGFNNF
301: NFCFILAMLF VAIYPVIRRK YDRALLVVIS PMYIWLAFMS LQPHKEERFL YPIYPLICVS ASAVIENIPE LFREKYSSRE SLLVTITKYM RPVILGCILC
401: ASHSRTFALI NGYSAPLEVY KLLEHHDDAG PGSVLCVGSE WHRYPSSFFV PHYISEVRWI DDGFRGLLPF PFNNTLGGTS ASPPYFNNKN QASEEQYLKN
501: IETCTFLIEL QLSRPYQYRG SDLSTWEAIA VLPYLDRELS PAKYRSFFIP HMWQEKNVFG KYVALRRVPK
101: SYLYILFHEL AGRPASWWFG DDKVRVFYAV RLFLGLVSAV SDTVLVVALS RKYGKRIATY AVAMLCLTSG CFFASTSFLP SSFSMYAISL SSGLLLFEKY
201: AMAVAVSVVG VILGWPFSIL AFLPVVIYSL VKRFKQAFIA GAVTTIFLLG VSLLVDYYYY KRWTSSVLNL LIYNVLGGGE SHLYGTEGAL FYIRNGFNNF
301: NFCFILAMLF VAIYPVIRRK YDRALLVVIS PMYIWLAFMS LQPHKEERFL YPIYPLICVS ASAVIENIPE LFREKYSSRE SLLVTITKYM RPVILGCILC
401: ASHSRTFALI NGYSAPLEVY KLLEHHDDAG PGSVLCVGSE WHRYPSSFFV PHYISEVRWI DDGFRGLLPF PFNNTLGGTS ASPPYFNNKN QASEEQYLKN
501: IETCTFLIEL QLSRPYQYRG SDLSTWEAIA VLPYLDRELS PAKYRSFFIP HMWQEKNVFG KYVALRRVPK
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.