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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY50254 Canola plasma membrane 100.0 100.0
Bra015133.1-P Field mustard plasma membrane 98.76 98.76
AT2G04100.1 Thale cress plasma membrane 84.89 84.89
AT2G04090.1 Thale cress plasma membrane 81.57 82.6
CDX81843 Canola plasma membrane 74.12 75.21
CDY50255 Canola cytosol, peroxisome, vacuole 36.85 74.48
CDY21736 Canola plasma membrane 73.08 74.16
CDY71754 Canola plasma membrane 39.96 73.11
CDY15087 Canola plasma membrane 71.22 72.27
CDY72452 Canola cytosol, extracellular, mitochondrion 13.66 70.97
KRH70420 Soybean plasma membrane 52.38 53.15
Solyc02g063270.2.1 Tomato plasma membrane 49.69 52.86
PGSC0003DMT400078715 Potato plasma membrane 51.76 52.74
Solyc02g091050.2.1 Tomato plasma membrane 51.76 52.74
PGSC0003DMT400026959 Potato cytosol, plasma membrane, vacuole 51.55 51.88
KRH01702 Soybean plasma membrane 40.99 51.03
CDY72127 Canola plasma membrane 33.54 50.94
GSMUA_Achr4P03730_001 Banana endoplasmic reticulum, plasma membrane, vacuole 46.58 50.79
GSMUA_Achr3P29080_001 Banana plasma membrane 46.58 50.79
CDY36531 Canola plasma membrane 50.31 50.62
Solyc02g063260.2.1 Tomato plasma membrane 51.55 50.61
CDY71492 Canola plasma membrane 45.34 50.46
Solyc03g034400.2.1 Tomato cytosol, plasma membrane, vacuole 49.07 50.43
CDY67968 Canola plasma membrane 50.1 50.0
TraesCS3A01G229400.1 Wheat plasma membrane 40.99 49.62
CDX81701 Canola plasma membrane 49.28 49.58
CDY39617 Canola plasma membrane 49.28 49.58
Os05t0554000-01 Rice cytosol, peroxisome, plasma membrane 41.61 49.26
Zm00001d009494_P001 Maize plasma membrane 47.83 49.25
PGSC0003DMT400043016 Potato cytosol, plasma membrane, vacuole 47.62 49.04
CDX86801 Canola plasma membrane 50.52 48.7
CDX96304 Canola plasma membrane 48.86 48.26
CDY52017 Canola plasma membrane 47.83 48.12
CDY13241 Canola plasma membrane 50.31 48.12
CDX72778 Canola plasma membrane 48.86 48.07
CDX68324 Canola plasma membrane 48.45 48.05
CDY49220 Canola plasma membrane 48.45 48.05
KRH01699 Soybean plasma membrane 40.37 48.03
CDY36231 Canola plasma membrane 45.13 47.91
CDX96130 Canola plasma membrane 46.79 47.88
TraesCS1B01G016700.1 Wheat plasma membrane 32.92 47.6
OQU78400 Sorghum cytosol, plasma membrane, vacuole 49.28 47.6
TraesCSU01G003900.1 Wheat cytosol, plasma membrane, vacuole 48.45 47.37
TraesCS1D01G388600.1 Wheat plasma membrane 48.24 47.36
KRH56518 Soybean plasma membrane 47.62 47.33
TraesCS1A01G380900.1 Wheat plasma membrane 48.24 47.26
TraesCS3A01G265100.1 Wheat plasma membrane 47.2 47.2
CDY36229 Canola plasma membrane 48.24 47.17
TraesCS3D01G227600.2 Wheat plasma membrane 46.58 47.07
TraesCS3B01G255200.2 Wheat plasma membrane 46.58 47.07
EES03448 Sorghum plasma membrane 47.62 47.03
Zm00001d043838_P002 Maize plasma membrane 47.41 47.02
KRG93178 Soybean plasma membrane 48.45 46.99
CDX87974 Canola cytosol, peroxisome, plasma membrane 45.96 46.93
TraesCS3D01G265400.1 Wheat plasma membrane 46.79 46.79
TraesCS3B01G298700.1 Wheat cytosol, plasma membrane, vacuole 46.58 46.58
CDX83993 Canola plasma membrane 42.03 46.35
CDX77471 Canola plasma membrane 37.89 46.33
KRH70422 Soybean plasma membrane 45.96 46.06
TraesCS2D01G214300.1 Wheat plasma membrane 46.17 45.88
CDY12351 Canola cytosol, peroxisome, plasma membrane 45.76 45.85
HORVU1Hr1G084190.9 Barley mitochondrion, peroxisome, plasma membrane 47.0 45.77
Os01t0684900-01 Rice plasma membrane 46.38 45.62
TraesCS2B01G229100.1 Wheat plasma membrane 45.76 45.47
CDX96129 Canola plasma membrane 47.62 44.4
CDY00530 Canola plasma membrane 44.1 44.01
Zm00001d027921_P002 Maize plasma membrane 44.93 43.75
Os01t0504500-02 Rice plasma membrane 45.34 43.63
CDX73002 Canola plasma membrane 36.02 43.5
TraesCS2A01G202000.1 Wheat plasma membrane 45.96 43.36
CDY54775 Canola plasma membrane 43.69 43.15
CDX91652 Canola plasma membrane 43.27 43.0
CDY68867 Canola plasma membrane 41.41 42.73
CDY36230 Canola plasma membrane 47.41 42.72
HORVU2Hr1G039850.10 Barley peroxisome, plasma membrane, plastid 44.51 42.66
CDY27066 Canola plasma membrane 42.86 42.51
CDY49289 Canola plasma membrane 43.06 42.36
EER95390 Sorghum plasma membrane 44.1 42.18
CDX84324 Canola plasma membrane 42.24 42.15
TraesCS1D01G009800.1 Wheat plasma membrane 43.69 42.12
CDY60134 Canola plasma membrane 40.99 41.86
CDX72467 Canola plasma membrane 42.44 41.84
CDX79559 Canola plasma membrane 41.2 40.86
CDX68215 Canola plasma membrane 28.78 40.17
CDY17238 Canola plasma membrane 42.24 40.08
CDY65688 Canola plasma membrane 31.47 39.9
CDY17027 Canola plasma membrane 31.06 37.5
CDY09031 Canola plasma membrane 36.85 37.47
CDY18116 Canola plasma membrane 37.27 37.34
CDY18118 Canola plasma membrane 33.13 35.56
HORVU3Hr1G063430.3 Barley plastid 30.64 26.33
CDX84649 Canola vacuole 41.2 20.52
CDY18117 Canola cytosol, extracellular, plasma membrane 1.45 20.0
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078GR39UniProt:A0A078GR39EnsemblPlants:CDY27886ProteinID:CDY27886ProteinID:CDY27886.1
ProteinID:CDY50254.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855
GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085
EnsemblPlantsGene:GSBRNA2T00038745001InterPro:MATE_famPFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF189TIGRFAMs:TIGR00797
TMHMM:TMhelixUniParc:UPI0004EE1046SEG:seg:::
Description
BnaA07g04760DProtein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A078GR39]
Coordinates
chrLK032211:+:268756..270932
Molecular Weight (calculated)
51842.5 Da
IEP (calculated)
6.736
GRAVY (calculated)
0.670
Length
483 amino acids
Sequence
(BLAST)
001: MEDPLLPEDE QCTTGNPKPT PTWPIDFTAE LKNVSRMAAP MATVTVAQFL LPLISVMVAG HRGELQLSGV ALATSFANVS GFSIMFGLVG ALETLCGQAY
101: GAKQYSKLGT FTYSAIASNV PICVLISILW IYMDKLLISI GQDHDISKVA GSYAVWLIPG LFAQAVQQPV TRFLQTQGLV LPLLYCALST LLFHIPVCWI
201: LVYTFGLGSN GAALAISLSY WFNVLSLACY VRFSSSCEKT RGFVSDDFVS GVKQFFQYGI PSAAMTCLEW WLFELLILSS GLLPNPKLET SVLSVCLSTG
301: SLHYVIPMGI AAAVSTRIAN ELGAGNPEVA RLAVFAGICL WLLEAAICST ILFISRNIFG YAFSNSKEVV DYVTELAPLL CLSFIVDGFS AVLGGVARGS
401: GWQHIGAWAN VVAYYLIGAP VGLFLAFWCH MNGKGLWIGV IFGSSSQGII LAIVTACMSW NEQASKARKR IVVGTSSFGN GIA
Best Arabidopsis Sequence Match ( AT2G04100.1 )
(BLAST)
001: MEDPLLLGDN QIITGSLKPT PTWRMNFTAE LKNLSRMALP MATVTVAQYL LPVISVMVAG HRSELQLSGV ALATSFTNVS GFSVMFGLAG ALETLCGQAY
101: GAKQYAKIGT YTFSAIVSNV PIVVLISILW FYMDKLFVSL GQDPDISKVA GSYAVCLIPA LLAQAVQQPL TRFLQTQGLV LPLLYCAITT LLFHIPVCLI
201: LVYAFGLGSN GAALAIGLSY WFNVLILALY VRFSSSCEKT RGFVSDDFVL SVKQFFQYGI PSAAMTTIEW SLFEFLILSS GLLPNPKLET SVLSICLTTS
301: SLHYVIPMGI GAAGSIRVSN ELGAGNPEVA RLAVFAGIFL WFLEATICST LLFICRDIFG YAFSNSKEVV DYVTELSPLL CISFLVDGFS AVLGGVARGS
401: GWQHIGAWAN VVAYYLLGAP VGLFLGFWCH MNGKGLWIGV VVGSTAQGII LAIVTACMSW NEQAAKARQR IVVRTSSFGN GLA
Arabidopsis Description
DTX6Protein DETOXIFICATION 6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWF5]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.