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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 5
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d027921_P002 Maize plasma membrane 90.1 91.73
TraesCS2B01G229100.1 Wheat plasma membrane 79.01 82.1
TraesCS2D01G214300.1 Wheat plasma membrane 78.61 81.69
Os01t0504500-02 Rice plasma membrane 80.2 80.68
TraesCS1B01G016700.1 Wheat plasma membrane 52.08 78.74
TraesCS2A01G202000.1 Wheat plasma membrane 79.21 78.12
HORVU2Hr1G039850.10 Barley peroxisome, plasma membrane, plastid 77.43 77.58
TraesCS1D01G009800.1 Wheat plasma membrane 71.88 72.46
GSMUA_Achr3P29080_001 Banana plasma membrane 52.48 59.82
GSMUA_Achr4P03730_001 Banana endoplasmic reticulum, plasma membrane, vacuole 51.49 58.69
EES03448 Sorghum plasma membrane 52.48 54.19
VIT_01s0011g04450.t01 Wine grape cytosol, golgi, plasma membrane 49.31 51.77
PGSC0003DMT400078716 Potato extracellular, plasma membrane, vacuole 43.96 51.63
VIT_01s0011g04430.t01 Wine grape plasma membrane 48.91 51.35
KRG90943 Soybean plasma membrane 41.39 51.1
OQU78400 Sorghum cytosol, plasma membrane, vacuole 50.3 50.8
KRG90944 Soybean plasma membrane 47.33 50.21
KRH35832 Soybean plasma membrane 47.13 50.11
KRH35829 Soybean golgi, nucleus, vacuole 46.93 49.69
KRH53068 Soybean plasma membrane 47.13 49.58
PGSC0003DMT400078371 Potato plasma membrane 44.55 49.56
Solyc02g091070.2.1 Tomato plasma membrane 46.14 49.47
PGSC0003DMT400078374 Potato plasma membrane 41.58 49.18
KRH35828 Soybean plasma membrane 46.53 49.16
Solyc03g034400.2.1 Tomato cytosol, plasma membrane, vacuole 45.35 48.72
KRH70431 Soybean plasma membrane 45.74 48.63
PGSC0003DMT400043016 Potato cytosol, plasma membrane, vacuole 45.15 48.61
KRH01698 Soybean plasma membrane 45.94 48.33
PGSC0003DMT400078715 Potato plasma membrane 45.35 48.31
AT1G15180.1 Thale cress plasma membrane 45.94 48.13
KRH56353 Soybean plasma membrane 45.74 48.12
PGSC0003DMT400015301 Potato plasma membrane 45.94 48.03
KXG26020 Sorghum plasma membrane 45.54 47.92
Solyc04g007530.2.1 Tomato plasma membrane 45.54 47.82
Solyc02g091050.2.1 Tomato plasma membrane 44.75 47.68
AT1G15170.1 Thale cress plasma membrane 45.35 47.61
KRH01699 Soybean plasma membrane 38.22 47.54
KXG21780 Sorghum plasma membrane 42.18 47.33
PGSC0003DMT400026959 Potato cytosol, plasma membrane, vacuole 44.95 47.29
Solyc05g008510.2.1 Tomato plasma membrane 44.75 47.28
Solyc02g063270.2.1 Tomato plasma membrane 42.18 46.92
KRH35833 Soybean plasma membrane 42.57 46.84
AT1G71140.1 Thale cress plasma membrane 44.95 46.8
KRH70420 Soybean plasma membrane 43.96 46.64
Bra026160.1-P Field mustard plasma membrane 44.16 46.56
CDY71492 Canola plasma membrane 40.0 46.54
CDY72127 Canola plasma membrane 29.31 46.54
CDX87974 Canola cytosol, peroxisome, plasma membrane 43.56 46.51
AT1G66760.2 Thale cress cytosol, peroxisome, plasma membrane 44.16 46.27
CDY36531 Canola plasma membrane 43.96 46.25
Bra003935.1-P Field mustard plasma membrane 42.18 46.2
CDY39617 Canola plasma membrane 43.76 46.04
VIT_14s0006g02260.t01 Wine grape plasma membrane 44.95 45.95
KRH56518 Soybean plasma membrane 44.16 45.88
Bra015208.1-P Field mustard cytosol, peroxisome, plasma membrane 43.76 45.85
CDY67968 Canola plasma membrane 43.76 45.66
Solyc05g008500.1.1 Tomato plasma membrane 40.99 45.39
CDY12351 Canola cytosol, peroxisome, plasma membrane 43.17 45.23
KRH70422 Soybean plasma membrane 43.17 45.23
CDX72778 Canola plasma membrane 43.96 45.21
CDX81701 Canola plasma membrane 42.97 45.21
CDY52017 Canola plasma membrane 42.97 45.21
CDX96304 Canola plasma membrane 43.76 45.19
Bra004188.1-P Field mustard plasma membrane 41.39 45.14
KXG19962 Sorghum plasma membrane 42.77 45.09
KRG93178 Soybean plasma membrane 44.36 44.98
Solyc02g063260.2.1 Tomato plasma membrane 43.76 44.92
Bra016158.1-P Field mustard plasma membrane 43.56 44.9
CDX68324 Canola plasma membrane 43.17 44.76
AT1G15150.1 Thale cress plasma membrane 42.97 44.56
AT2G04050.1 Thale cress plasma membrane 41.98 44.54
Bra026778.1-P Field mustard plasma membrane 42.38 44.49
CDY36231 Canola plasma membrane 40.0 44.4
Bra016671.1-P Field mustard plasma membrane 42.18 44.19
Solyc02g091080.1.1 Tomato golgi, peroxisome, plasma membrane 44.36 44.18
CDY49220 Canola plasma membrane 42.57 44.15
EES06697 Sorghum plasma membrane 42.57 44.15
Bra015133.1-P Field mustard plasma membrane 42.18 44.1
CDY27886 Canola plasma membrane 42.18 44.1
CDY50254 Canola plasma membrane 42.18 44.1
OQU77813 Sorghum plasma membrane 41.39 44.09
KRH01702 Soybean plasma membrane 33.86 44.07
CDX96130 Canola plasma membrane 41.19 44.07
CDX83993 Canola plasma membrane 38.22 44.06
EES06698 Sorghum plasma membrane 41.78 43.96
Bra007964.1-P Field mustard cytosol, golgi, plasma membrane 42.97 43.93
AT2G04100.1 Thale cress plasma membrane 41.98 43.89
Bra013214.1-P Field mustard plasma membrane 41.19 43.7
AT1G15160.1 Thale cress plasma membrane 41.98 43.53
AT1G66780.1 Thale cress plasma membrane 41.58 43.3
CDY15087 Canola plasma membrane 40.79 43.28
Bra035241.1-P Field mustard plasma membrane 42.77 43.2
CDX86801 Canola plasma membrane 42.77 43.11
AT2G04080.1 Thale cress plasma membrane 40.59 43.07
CDY72452 Canola cytosol, extracellular, mitochondrion 7.92 43.01
CDX81843 Canola plasma membrane 40.4 42.86
CDY13241 Canola plasma membrane 42.77 42.77
KRG90942 Soybean plasma membrane 46.93 42.7
AT2G04040.1 Thale cress vacuole 40.2 42.65
CDY36229 Canola plasma membrane 41.58 42.51
CDY21736 Canola plasma membrane 40.0 42.44
OQU80064 Sorghum plasma membrane 24.75 42.09
CDX77471 Canola plasma membrane 32.87 42.03
KXG30060 Sorghum plasma membrane 42.38 41.88
EER90350 Sorghum plasma membrane 40.0 41.82
AT2G04090.1 Thale cress plasma membrane 39.41 41.72
CDY71754 Canola plasma membrane 21.58 41.29
Bra030999.1-P Field mustard plasma membrane 34.65 40.89
CDX96129 Canola plasma membrane 41.78 40.73
AT1G64820.1 Thale cress plasma membrane 39.21 39.44
CDY36230 Canola plasma membrane 41.58 39.18
CDY50255 Canola cytosol, peroxisome, vacuole 18.42 38.91
OQU77045 Sorghum plastid 30.1 36.98
OQU88303 Sorghum cytosol, peroxisome, plasma membrane 33.47 33.4
Bra014999.1-P Field mustard plasma membrane 37.43 33.39
EER99421 Sorghum plasma membrane 35.84 30.57
Bra015131.1-P Field mustard cytosol 38.81 25.76
Bra004187.1-P Field mustard plasma membrane 41.58 23.81
Protein Annotations
MapMan:24.2.4.1.1EntrezGene:8082011UniProt:C5WVR9EnsemblPlants:EER95390ProteinID:EER95390ProteinID:EER95390.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150
GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:MATE_fam
PFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF171EnsemblPlantsGene:SORBI_3001G481800unigene:Sbi.6790TIGRFAMs:TIGR00797
TMHMM:TMhelixUniParc:UPI0001A82E8ARefSeq:XP_002468392.1SEG:seg::
Description
hypothetical protein
Coordinates
chr1:-:75334119..75339170
Molecular Weight (calculated)
53992.6 Da
IEP (calculated)
6.156
GRAVY (calculated)
0.696
Length
505 amino acids
Sequence
(BLAST)
001: MGSSEAPLLL AHPGEGKEDP GADVGDRRRL RCCWWWRRCG GASSEGWWAE VTAEAGRLAA LAAPMIAVAL LQLMMQLIST IMVGHLGEVP LAGAAIANSL
101: TNVSGFSVLM GLASGLETIC GQAFGAEQYH KVALYTYRSI IVLLIASVPM AITWVFIPDV LPLIGQDPQI ASEAGRYALW LIPGLFAFSV AQCLSKFLQS
201: QSLIFPMVLS SFTTLAVFIP LCWFMVYKVG MGNAGAAFAV SICDWVEVTV LGLYIKFSPS CEKTRAPFTW EAFRGIGNFM RLAVPSALMI CLEWWSYELL
301: VLLCGVLPNA ALETSVLSIC ISTVVLVYNL PYGIGTAASV RVSNELGAGN PDGARLVVVV ALSIIICTAV LLSITLLSFR HFVGIAFSNE EEVVNHVTRM
401: VPLLSISVLT DNLQGVLSGI SRGCGWQHLG AYVNLGAFYL IGIPVGLVAG FALHLGGAGF WIGMIAGGAT QVTLLSVITA MTNWQKMADK ARDRVYEGSL
501: PTQAD
Best Arabidopsis Sequence Match ( AT1G15170.1 )
(BLAST)
001: MGDAESTKDR LLLPVERVEN VTWSDLRDGS FTVELKRLIF FAAPMAAVVI AQFMLQIVSM MMVGHLGNLS LASASLASSF CNVTGFSFII GLSCALDTLS
101: GQAYGAKLYR KLGVQTYTAM FCLALVCLPL SLIWFNMEKL LLILGQDPSI AHEAGKYATW LIPGLFAYAV LQPLTRYFQN QSLITPLLIT SYVVFCIHVP
201: LCWFLVYNSG LGNLGGALAI SLSNWLYAIF LGSFMYYSSA CSETRAPLSM EIFDGIGEFF KYALPSAAMI CLEWWSYELI ILLSGLLPNP QLETSVLSVC
301: LQTISTMYSI PLAIAAAAST RISNELGAGN SRAAHIVVYA AMSLAVIDAL IVSMSLLIGR NLFGHIFSSD KETIDYVAKM APLVSISLML DALQGVLSGI
401: ARGCGWQHIG AYINLGAFYL WGIPIAASLA FWIHLKGVGL WIGIQAGAVL QTLLLALVTG CTNWESQADK ARNRMALAYG T
Arabidopsis Description
DTX12Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178WNL0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.