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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 6
  • golgi 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
iPSORT:secretory
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc05g008510.2.1 Tomato plasma membrane 96.96 86.61
PGSC0003DMT400078371 Potato plasma membrane 90.87 85.46
VIT_01s0011g04450.t01 Wine grape cytosol, golgi, plasma membrane 71.9 63.83
PGSC0003DMT400015301 Potato plasma membrane 69.32 61.28
GSMUA_Achr3P29080_001 Banana plasma membrane 62.06 59.82
KRH35832 Soybean plasma membrane 66.51 59.79
VIT_01s0011g04430.t01 Wine grape plasma membrane 66.98 59.46
KRG90944 Soybean plasma membrane 64.64 57.98
KRH35829 Soybean golgi, nucleus, vacuole 64.17 57.44
KRH35828 Soybean plasma membrane 63.93 57.11
KRG90943 Soybean plasma membrane 53.86 56.23
KRH53068 Soybean plasma membrane 63.0 56.04
KRH35833 Soybean plasma membrane 60.19 55.99
GSMUA_Achr4P03730_001 Banana endoplasmic reticulum, plasma membrane, vacuole 58.08 55.98
PGSC0003DMT400078716 Potato extracellular, plasma membrane, vacuole 56.21 55.81
Bra003935.1-P Field mustard plasma membrane 59.25 54.88
CDY72127 Canola plasma membrane 40.75 54.72
TraesCS3A01G229400.1 Wheat plasma membrane 50.12 53.63
CDX96304 Canola plasma membrane 60.66 52.97
Bra016158.1-P Field mustard plasma membrane 60.66 52.86
AT1G71140.1 Thale cress plasma membrane 59.95 52.78
CDX72778 Canola plasma membrane 60.66 52.75
TraesCS1B01G016700.1 Wheat plasma membrane 40.75 52.1
CDY67968 Canola plasma membrane 59.02 52.07
CDY49220 Canola plasma membrane 58.78 51.54
CDX68324 Canola plasma membrane 58.78 51.54
PGSC0003DMT400078715 Potato plasma membrane 56.67 51.05
PGSC0003DMT400026959 Potato cytosol, plasma membrane, vacuole 57.38 51.04
AT1G15170.1 Thale cress plasma membrane 57.38 50.94
CDY52017 Canola plasma membrane 57.14 50.83
CDY39617 Canola plasma membrane 56.91 50.62
CDX81701 Canola plasma membrane 56.67 50.42
Bra026160.1-P Field mustard plasma membrane 56.44 50.31
CDY71492 Canola plasma membrane 51.05 50.23
AT1G15180.1 Thale cress plasma membrane 56.67 50.21
Bra016671.1-P Field mustard plasma membrane 56.44 50.0
CDY36531 Canola plasma membrane 56.21 50.0
Bra007964.1-P Field mustard cytosol, golgi, plasma membrane 57.61 49.8
AT1G15150.1 Thale cress plasma membrane 56.44 49.49
Bra026778.1-P Field mustard plasma membrane 55.74 49.48
Zm00001d009494_P001 Maize plasma membrane 54.33 49.47
AT1G15160.1 Thale cress plasma membrane 56.21 49.28
PGSC0003DMT400043016 Potato cytosol, plasma membrane, vacuole 54.1 49.25
Os01t0684900-01 Rice plasma membrane 56.21 48.88
TraesCS3A01G265100.1 Wheat plasma membrane 55.27 48.86
TraesCS3B01G255200.2 Wheat plasma membrane 54.57 48.74
TraesCS3B01G298700.1 Wheat cytosol, plasma membrane, vacuole 55.04 48.65
CDX83993 Canola plasma membrane 49.88 48.63
TraesCS3D01G227600.2 Wheat plasma membrane 54.33 48.54
KRG90942 Soybean plasma membrane 63.0 48.47
TraesCS3D01G265400.1 Wheat plasma membrane 54.8 48.45
TraesCSU01G003900.1 Wheat cytosol, plasma membrane, vacuole 55.74 48.18
Os05t0554000-01 Rice cytosol, peroxisome, plasma membrane 45.9 48.04
TraesCS1D01G388600.1 Wheat plasma membrane 55.27 47.97
TraesCS1A01G380900.1 Wheat plasma membrane 55.27 47.87
OQU78400 Sorghum cytosol, plasma membrane, vacuole 55.74 47.6
CDX77471 Canola plasma membrane 43.79 47.34
EES03448 Sorghum plasma membrane 54.1 47.24
HORVU1Hr1G084190.9 Barley mitochondrion, peroxisome, plasma membrane 54.57 46.98
Zm00001d043838_P002 Maize plasma membrane 53.4 46.82
TraesCS2B01G229100.1 Wheat plasma membrane 51.99 45.68
TraesCS2D01G214300.1 Wheat plasma membrane 51.99 45.68
PGSC0003DMT400014431 Potato plasma membrane 51.05 44.04
TraesCS2A01G202000.1 Wheat plasma membrane 51.99 43.36
TraesCS1D01G009800.1 Wheat plasma membrane 50.59 43.11
HORVU2Hr1G039850.10 Barley peroxisome, plasma membrane, plastid 50.82 43.06
PGSC0003DMT400078840 Potato golgi, plasma membrane, vacuole 47.07 43.04
PGSC0003DMT400065417 Potato plasma membrane 48.01 42.98
Zm00001d027921_P002 Maize plasma membrane 49.65 42.74
Os01t0504500-02 Rice plasma membrane 49.65 42.23
PGSC0003DMT400046664 Potato plasma membrane 46.6 41.98
PGSC0003DMT400048259 Potato plasma membrane 46.6 41.72
EER95390 Sorghum plasma membrane 49.18 41.58
PGSC0003DMT400070690 Potato endoplasmic reticulum, plasma membrane, vacuole 44.26 41.36
PGSC0003DMT400070650 Potato plasma membrane 32.08 40.77
Bra014999.1-P Field mustard plasma membrane 52.22 39.4
PGSC0003DMT400054780 Potato plasma membrane 34.66 39.36
PGSC0003DMT400046656 Potato plasma membrane 42.62 39.06
PGSC0003DMT400046666 Potato plasma membrane 44.03 38.45
PGSC0003DMT400049147 Potato plasma membrane 38.41 33.74
PGSC0003DMT400014996 Potato plasma membrane 34.19 33.33
PGSC0003DMT400054764 Potato plasma membrane 40.05 32.45
HORVU3Hr1G063430.3 Barley plastid 37.24 28.29
PGSC0003DMT400064458 Potato plasma membrane 26.46 27.56
Protein Annotations
MapMan:24.2.4.1.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855
GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085
UniProt:M1CZZ6InterPro:MATE_famPFAM:PF01554EnsemblPlantsGene:PGSC0003DMG402030515PGSC:PGSC0003DMG402030515EnsemblPlants:PGSC0003DMT400078374
PANTHER:PTHR11206PANTHER:PTHR11206:SF87TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0002952E9DSEG:seg
Description
TRANSPARENT TESTA 12 protein [Source:PGSC_GENE;Acc:PGSC0003DMG402030515]
Coordinates
chr5:-:3775904..3779888
Molecular Weight (calculated)
45873.0 Da
IEP (calculated)
7.809
GRAVY (calculated)
0.777
Length
427 amino acids
Sequence
(BLAST)
001: MVGHLGELAL SSTSIAISIG GVTGLSLLLG MGTALETLCG QAFGAKQYQR LGTQTYTAIL SLFIVCIPIA VLWLYVGKLL TLMGQDPQIS HEAGKFIKWM
101: IPALFAYANL QPLVRYFLMQ SMIVPMLISS CITICFHILL SWVLVFSSGL GNIGAAVAIG LSMWLNVIIL ASYMKLSPAC AKTRAPVSWE VVNGMREFFQ
201: FAIPSAVMIC LEWWSFELLI LLSGLLPNPQ LETSVLSICL NTIATLYAIP FGLSGAVSTR VSNQLGAGNP QGARVSAISV MLIAATETIL VSAAVFASRN
301: VFGYIFSNEK EVVDYVANMA PLLCLSVITD SLQGTLSGVA RGCGWQHIGA YVNLASFYLC GIPIAASLAF WLNFRGKGLW IGILSGAALQ TILLSVITCC
401: TNWEKQAAMA RERLHADEKS SVDNMLS
Best Arabidopsis Sequence Match ( AT1G71140.1 )
(BLAST)
001: MDSAEKGLLV VSDREEVNKK DGFLRETKKL SYIAGPMIAV NSSMYVLQVI SIMMVGHLGE LFLSSTAIAV SFCSVTGFSV VFGLASALET LCGQANGAKQ
101: YEKLGVHTYT GIVSLFLVCI PLSLLWTYIG DILSLIGQDA MVAQEAGKFA TWLIPALFGY ATLQPLVRFF QAQSLILPLV MSSVSSLCIH IVLCWSLVFK
201: FGLGSLGAAI AIGVSYWLNV TVLGLYMTFS SSCSKSRATI SMSLFEGMGE FFRFGIPSAS MICLEWWSFE FLVLLSGILP NPKLEASVLS VCLSTQSSLY
301: QIPESLGAAA STRVANELGA GNPKQARMAV YTAMVITGVE SIMVGAIVFG ARNVFGYLFS SETEVVDYVK SMAPLLSLSV IFDALHAALS GVARGSGRQD
401: IGAYVNLAAY YLFGIPTAIL LAFGFKMRGR GLWIGITVGS CVQAVLLGLI VILTNWKKQA RKARERVMGD EYEEKESEEE HEYIS
Arabidopsis Description
DTX14Protein DETOXIFICATION 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9C994]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.