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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc03g118970.2.1 Tomato plasma membrane 95.15 95.15
VIT_17s0000g02970.t01 Wine grape plasma membrane 70.51 70.79
VIT_17s0000g02990.t01 Wine grape plasma membrane 69.7 70.26
KRH41776 Soybean cytosol, peroxisome, plasma membrane 68.28 67.87
KRH39120 Soybean plasma membrane 66.46 67.28
AT5G52450.1 Thale cress plasma membrane 63.64 64.81
CDY00530 Canola plasma membrane 62.42 63.84
Bra028309.1-P Field mustard plasma membrane 62.42 63.84
Bra028310.1-P Field mustard plasma membrane 61.41 63.47
CDY54775 Canola plasma membrane 62.22 62.99
Bra005432.1-P Field mustard plasma membrane 58.59 61.57
CDX84324 Canola plasma membrane 60.2 61.57
KRH41780 Soybean plasma membrane 58.59 61.05
PGSC0003DMT400078840 Potato golgi, plasma membrane, vacuole 57.37 60.81
PGSC0003DMT400065417 Potato plasma membrane 58.59 60.8
CDX91652 Canola plasma membrane 59.6 60.7
KRH39118 Soybean endoplasmic reticulum, golgi, plasma membrane 57.98 60.55
Bra022594.1-P Field mustard plasma membrane 59.39 60.37
CDY27066 Canola plasma membrane 59.39 60.37
CDX79559 Canola plasma membrane 59.19 60.16
AT2G34360.1 Thale cress plasma membrane 57.37 59.17
PGSC0003DMT400070650 Potato plasma membrane 40.0 58.93
CDY68867 Canola plasma membrane 55.56 58.76
CDX73002 Canola plasma membrane 47.27 58.5
CDY17238 Canola plasma membrane 60.0 58.35
AT1G73700.1 Thale cress plasma membrane 55.76 57.98
PGSC0003DMT400048259 Potato plasma membrane 55.56 57.65
Bra015973.1-P Field mustard plasma membrane 54.75 57.29
CDY60134 Canola plasma membrane 54.75 57.29
CDX72467 Canola plasma membrane 56.57 57.14
PGSC0003DMT400070690 Potato endoplasmic reticulum, plasma membrane, vacuole 52.73 57.11
Bra017640.1-P Field mustard plasma membrane 56.16 56.62
CDY49289 Canola plasma membrane 56.16 56.62
KRH39117 Soybean golgi, plasma membrane 50.51 56.31
CDX68215 Canola plasma membrane 39.19 56.07
KRH48596 Soybean plasma membrane 52.93 55.86
PGSC0003DMT400046664 Potato plasma membrane 53.33 55.7
KRH48598 Soybean plasma membrane 50.91 53.96
PGSC0003DMT400046666 Potato plasma membrane 51.72 52.35
KRH48599 Soybean vacuole 44.44 52.13
Bra003832.1-P Field mustard plasma membrane 54.34 51.14
PGSC0003DMT400078374 Potato plasma membrane 44.04 51.05
PGSC0003DMT400046656 Potato plasma membrane 47.68 50.64
PGSC0003DMT400078716 Potato extracellular, plasma membrane, vacuole 43.43 50.0
PGSC0003DMT400078371 Potato plasma membrane 45.66 49.78
PGSC0003DMT400026959 Potato cytosol, plasma membrane, vacuole 45.86 47.29
PGSC0003DMT400015301 Potato plasma membrane 46.06 47.2
PGSC0003DMT400078715 Potato plasma membrane 44.85 46.84
PGSC0003DMT400043016 Potato cytosol, plasma membrane, vacuole 42.63 44.99
PGSC0003DMT400054780 Potato plasma membrane 33.13 43.62
PGSC0003DMT400049147 Potato plasma membrane 40.4 41.15
PGSC0003DMT400054764 Potato plasma membrane 40.2 37.76
PGSC0003DMT400064458 Potato plasma membrane 29.9 36.1
PGSC0003DMT400014996 Potato plasma membrane 31.11 35.16
Bra022974.1-P Field mustard vacuole 58.18 31.48
CDX84649 Canola vacuole 59.39 30.31
Protein Annotations
MapMan:24.2.4.1.1ProteinID:AFX67006ProteinID:AFX67006.1GO:GO:0003674GO:GO:0005215GO:GO:0005575
GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020
GO:GO:0016021GO:GO:0055085EMBL:JX683443UniProt:M1A479InterPro:MATE_famPFAM:PF01554
EnsemblPlantsGene:PGSC0003DMG400005661PGSC:PGSC0003DMG400005661EnsemblPlants:PGSC0003DMT400014431PANTHER:PTHR11206PANTHER:PTHR11206:SF198TIGRFAMs:TIGR00797
TMHMM:TMhelixUniParc:UPI000294D682SEG:seg:::
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400005661]
Coordinates
chr3:-:58460065..58463212
Molecular Weight (calculated)
53876.3 Da
IEP (calculated)
7.886
GRAVY (calculated)
0.687
Length
495 amino acids
Sequence
(BLAST)
001: MEAEYGKSSS VKTPLIDDRE KQSILDETRK NGGGFSKEEI VDEVKRQVWL AGPLVSVNLL QFSLQLISIM FVGHLGKLPL SGASMANSFT SVTGISLLMG
101: MSSALDTFCG QSYGAKQYHM LGIHMQRAMI VLSLVSVPLA VIWANTGPIL KVLGQDPSIS DEAGQYALYF IPGVFAYGLL QCVVRFLQTQ SIVIPMVLCA
201: GVTTLIHVVV CWILVFKTGL GVKGAALANS ISYWLNFLFL VLYIKFSPSC AKTWTGLSKE ALKDMLTFLR LAVPSAIMVC LEMWSFELMV LLSGLLPNPQ
301: LETSVLSICL NTAATVWMIP FGLSGAVSTR VSNELGAAHP QLARLALYVV LAVAVIEGLV LGLVLILIRK VWGYAYSNET EVVKYIAIMM PLLATSNFLD
401: GLQCVLSGAV RGFGWQKIGA IINLGSYYLV GIPCAVLLAF YLHIGGKGLW LGIICALLVQ VLSLLFITIR TNWEQEAKKA QERVEETTLP AEIVY
Best Arabidopsis Sequence Match ( AT5G52450.1 )
(BLAST)
001: MRDDRERGEG DLSWPLIGEK SSVKEEVKKQ LWLSGPLIAV SLLQFCLQVI SVMFVGHLGS LPLSAASIAT SFASVTGFSF LMGTASALDT LCGQAYGAKK
101: YGMLGIQMQR AMFVLTLASI PLSIIWANTE HLLVFFGQNK SIATLAGSYA KFMIPSIFAY GLLQCFNRFL QAQNNVFPVV FCSGVTTSLH VLLCWVLVFK
201: SGLGFQGAAL ANSISYWLNV VLLFCYVKFS PSCSLTWTGF SKEALRDILP FLRLAVPSAL MVCLEMWSFE LLVLLSGLLP NPVLETSVLS ICLNTSGTMW
301: MIPFGLSGAA STRISNELGA GNPKVAKLAV RVVICIAVAE SIVIGSVLIL IRNIWGLAYS SELEVVSYVA SMMPILALGN FLDSLQCVLS GVARGCGWQK
401: IGAIINLGSY YLVGVPSGLL LAFHFHVGGR GLWLGIICAL VVQVFGLGLV TIFTNWDEEA KKATNRIESS SSVKDFAVDD RSVVVF
Arabidopsis Description
DTX16Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178UMN3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.