Factsheet for VIT_17s0000g02990.t01

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_17s0000g02970.t01	Wine grape	plasma membrane	93.69	93.31
KRH39120	Soybean	plasma membrane	74.34	74.64
KRH41776	Soybean	cytosol, peroxisome, plasma membrane	74.54	73.49
PGSC0003DMT400014431	Potato	plasma membrane	70.26	69.7
VIT_11s0052g01540.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	56.42	69.42
Solyc03g118970.2.1	Tomato	plasma membrane	69.65	69.09
CDY00530	Canola	plasma membrane	67.62	68.59
Bra028309.1-P	Field mustard	plasma membrane	67.62	68.59
Bra028310.1-P	Field mustard	plasma membrane	66.6	68.27
CDY54775	Canola	plasma membrane	67.62	67.89
VIT_11s0052g01570.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	60.9	67.8
AT5G52450.1	Thale cress	plasma membrane	67.01	67.7
VIT_11s0052g01560.t01	Wine grape	vacuole	58.45	67.06
Bra005432.1-P	Field mustard	plasma membrane	63.14	65.82
CDX84324	Canola	plasma membrane	64.77	65.7
CDX91652	Canola	plasma membrane	64.15	64.81
CDX79559	Canola	plasma membrane	63.75	64.27
Bra022594.1-P	Field mustard	plasma membrane	63.75	64.27
CDY27066	Canola	plasma membrane	63.75	64.27
KRH41780	Soybean	plasma membrane	61.91	64.0
CDY68867	Canola	plasma membrane	60.69	63.68
AT2G34360.1	Thale cress	plasma membrane	61.71	63.12
KRH39118	Soybean	endoplasmic reticulum, golgi, plasma membrane	60.9	63.08
VIT_01s0011g04460.t01	Wine grape	plasma membrane	58.04	62.78
Bra017640.1-P	Field mustard	plasma membrane	62.32	62.32
CDY49289	Canola	plasma membrane	62.32	62.32
VIT_11s0052g01510.t01	Wine grape	golgi, peroxisome, plasma membrane	63.95	62.3
CDY17238	Canola	plasma membrane	64.56	62.28
CDX72467	Canola	plasma membrane	61.91	62.04
CDY60134	Canola	plasma membrane	58.45	60.68
Bra015973.1-P	Field mustard	plasma membrane	58.45	60.68
KRH39117	Soybean	golgi, plasma membrane	54.79	60.59
AT1G73700.1	Thale cress	plasma membrane	58.66	60.5
CDX73002	Canola	plasma membrane	49.29	60.5
KRH48596	Soybean	plasma membrane	57.64	60.34
VIT_17s0000g09270.t01	Wine grape	plasma membrane	54.79	60.04
VIT_17s0000g03000.t01	Wine grape	plasma membrane	57.03	59.07
KRH48598	Soybean	plasma membrane	54.79	57.6
CDX68215	Canola	plasma membrane	40.53	57.51
KRH48599	Soybean	vacuole	47.45	55.21
Bra003832.1-P	Field mustard	plasma membrane	58.45	54.56
VIT_01s0011g04430.t01	Wine grape	plasma membrane	50.71	51.77
VIT_01s0011g04450.t01	Wine grape	cytosol, golgi, plasma membrane	50.31	51.35
VIT_14s0006g02260.t01	Wine grape	plasma membrane	46.44	46.15
VIT_19s0014g02450.t01	Wine grape	plasma membrane	41.34	41.68
VIT_19s0014g02440.t01	Wine grape	plasma membrane	41.14	40.97
Bra022974.1-P	Field mustard	vacuole	62.53	33.55
CDX84649	Canola	vacuole	63.75	32.27

Protein Annotations

EntrezGene:100252666	wikigene:100252666	MapMan:24.2.4.1.1	ProteinID:CCB43250	ProteinID:CCB43250.1	UniProt:F6GTS6
EMBL:FN594950	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006855
GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
EntrezGene:LOC100252666	wikigene:LOC100252666	InterPro:MATE_fam	PFAM:PF01554	PANTHER:PTHR11206	PANTHER:PTHR11206:SF198
TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI00015C950B	ArrayExpress:VIT_17s0000g02990	EnsemblPlantsGene:VIT_17s0000g02990	EnsemblPlants:VIT_17s0000g02990.t01
unigene:Vvi.20820	RefSeq:XP_002280388	RefSeq:XP_002280388.2	SEG:seg	:	:

Description

Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:F6GTS6]

Coordinates

chr17:-:2767975..2770598

Molecular Weight (calculated)

53423.9 Da

IEP (calculated)

7.600

GRAVY (calculated)

0.720

Length

491 amino acids

Sequence
(BLAST)

001: MDREDEKPTL RSPLIQKCGQ DGGGISMEKV LLREKVVVEV KKQLWLAGPL ISVSLLQQCL EVISLMFVGH LGDLSLSAAS MATSFASVTG FSLLMGMASA
101: LDTLCGQSYG AKQYHMLSIH MQRAMLILLI VSIPLATIWA YTGTILMAVG QDPEISQEAE LYARFMIPSL FAYGLLQCLV RFLQTQNIVF PMMLSSGITT
201: LLHVLVCWFL VFKSGLGSKG AALANSISCW INVLLLALYV KFSSSCSKTR TGFSKEALHN IPSFLRLAIP SAVMVCLEMW SFELMVLLSG LLPNPKLQTS
301: VLSICLYTAA TVWMIPFGLS GAVSTRVSNE LGAGHPQAAR LAVFVVLVMA LAEGTLIGLL LILIRNIWGY AYSNEIEVVT YVAAMMPILA LSNFLDGMQC
401: VLSGTARGCG WQKIGAFVNL GSYYLVGIPC AILLAFVFHI EGRGLWLGII CGLIVQVSSL LIITLRTNWE DEAKKATDRV YDAIIPVETV H

Best Arabidopsis Sequence Match ( AT5G52450.1 )
(BLAST)

001: MRDDRERGEG DLSWPLIGEK SSVKEEVKKQ LWLSGPLIAV SLLQFCLQVI SVMFVGHLGS LPLSAASIAT SFASVTGFSF LMGTASALDT LCGQAYGAKK
101: YGMLGIQMQR AMFVLTLASI PLSIIWANTE HLLVFFGQNK SIATLAGSYA KFMIPSIFAY GLLQCFNRFL QAQNNVFPVV FCSGVTTSLH VLLCWVLVFK
201: SGLGFQGAAL ANSISYWLNV VLLFCYVKFS PSCSLTWTGF SKEALRDILP FLRLAVPSAL MVCLEMWSFE LLVLLSGLLP NPVLETSVLS ICLNTSGTMW
301: MIPFGLSGAA STRISNELGA GNPKVAKLAV RVVICIAVAE SIVIGSVLIL IRNIWGLAYS SELEVVSYVA SMMPILALGN FLDSLQCVLS GVARGCGWQK
401: IGAIINLGSY YLVGVPSGLL LAFHFHVGGR GLWLGIICAL VVQVFGLGLV TIFTNWDEEA KKATNRIESS SSVKDFAVDD RSVVVF

Arabidopsis Description

DTX16Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178UMN3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.