Factsheet for VIT_11s0052g01510.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, golgi, plasma membrane

Predictor Summary:

nucleus 1
golgi 2
plasma membrane 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	golgi, peroxisome, plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	golgi
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0052g01540.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	74.21	93.73
VIT_11s0052g01560.t01	Wine grape	vacuole	77.38	91.12
VIT_11s0052g01570.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	72.82	83.22
Solyc07g006730.2.1	Tomato	plasma membrane	67.46	69.53
PGSC0003DMT400070650	Potato	plasma membrane	46.23	69.35
PGSC0003DMT400065417	Potato	plasma membrane	64.88	68.55
PGSC0003DMT400078840	Potato	golgi, plasma membrane, vacuole	61.71	66.6
Solyc07g006740.2.1	Tomato	plasma membrane	60.32	64.54
VIT_17s0000g02970.t01	Wine grape	plasma membrane	63.1	64.5
VIT_17s0000g02990.t01	Wine grape	plasma membrane	62.3	63.95
PGSC0003DMT400048259	Potato	plasma membrane	60.52	63.94
PGSC0003DMT400070690	Potato	endoplasmic reticulum, plasma membrane, vacuole	56.15	61.93
VIT_17s0000g09270.t01	Wine grape	plasma membrane	51.98	58.48
VIT_01s0011g04460.t01	Wine grape	plasma membrane	52.58	58.37
VIT_17s0000g03000.t01	Wine grape	plasma membrane	52.58	55.91
VIT_01s0011g04430.t01	Wine grape	plasma membrane	45.44	47.61
VIT_01s0011g04450.t01	Wine grape	cytosol, golgi, plasma membrane	45.24	47.4
VIT_14s0006g02260.t01	Wine grape	plasma membrane	41.47	42.31
VIT_19s0014g02450.t01	Wine grape	plasma membrane	38.1	39.43
VIT_19s0014g02440.t01	Wine grape	plasma membrane	37.5	38.34

Protein Annotations

EntrezGene:100241039	wikigene:100241039	EntrezGene:100242781	wikigene:100242781	EntrezGene:100247930	wikigene:100247930
MapMan:24.2.4.1.1	ProteinID:CCB44607	ProteinID:CCB44607.1	UniProt:F6GXC1	EMBL:FN594964	GO:GO:0003674
GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238
GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	EntrezGene:LOC100241039	wikigene:LOC100241039
EntrezGene:LOC100242781	wikigene:LOC100242781	EntrezGene:LOC100247930	wikigene:LOC100247930	InterPro:MATE_fam	PFAM:PF01554
PANTHER:PTHR11206	PANTHER:PTHR11206:SF196	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI0002108694	ArrayExpress:VIT_11s0052g01510
EnsemblPlantsGene:VIT_11s0052g01510	EnsemblPlants:VIT_11s0052g01510.t01	RefSeq:XP_002270870	RefSeq:XP_002270870.2	RefSeq:XP_002276239	RefSeq:XP_002276239.2
SEG:seg	:	:	:	:	:

Description

Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:F6GXC1]

Coordinates

chr11:+:19255101..19269283

Molecular Weight (calculated)

54571.8 Da

IEP (calculated)

8.449

GRAVY (calculated)

0.605

Length

504 amino acids

Sequence
(BLAST)

001: MDGKDQKPSL ESPLISQEAV SVSRNGAKRE EILGEVKKQL KLAGPLVSVN LLLYSLQVIS VMFVGHLGEL ALSGACMATS FASVTGFSLM VGMGSALDTF
101: CGQSFGAKQY HMLGVHKQRA MVVLLLVSIP VAFIWNNTGH ILASLGQDPE ISVEAGLYAH FMIPSIFAIA LLQCHIRFLQ AQNNVVPMMI TTGFTTLLHT
201: LTCWMLVFKS GLGNKGAALA NAISYWINVL LLAIYVRISP SCKKTWTGFS KEALHDVLKF LKLAIPSAIM LCLEIWSFEM MVLLSGLLPN PKLETSVLSI
301: SLNTYTVLYM IPLGLSGATS IRVSNELGAG RPQAALLAVY VALFMVAIEG ILVATALILG HSFWGYSYSS EEKVVNYVGE MMFLLAGSHF IDGIQSVLSG
401: VVRGSGKQKI GALVNLGAYY LAGIPSGALL AFVYHIGGKG LWTGIIVSLF MQALFLAIII LCTNWEKEQI NLSTLLLNHF HEATSKNYRS RLASPLELHL
501: EGAY

Best Arabidopsis Sequence Match ( AT5G52450.1 )
(BLAST)

001: MRDDRERGEG DLSWPLIGEK SSVKEEVKKQ LWLSGPLIAV SLLQFCLQVI SVMFVGHLGS LPLSAASIAT SFASVTGFSF LMGTASALDT LCGQAYGAKK
101: YGMLGIQMQR AMFVLTLASI PLSIIWANTE HLLVFFGQNK SIATLAGSYA KFMIPSIFAY GLLQCFNRFL QAQNNVFPVV FCSGVTTSLH VLLCWVLVFK
201: SGLGFQGAAL ANSISYWLNV VLLFCYVKFS PSCSLTWTGF SKEALRDILP FLRLAVPSAL MVCLEMWSFE LLVLLSGLLP NPVLETSVLS ICLNTSGTMW
301: MIPFGLSGAA STRISNELGA GNPKVAKLAV RVVICIAVAE SIVIGSVLIL IRNIWGLAYS SELEVVSYVA SMMPILALGN FLDSLQCVLS GVARGCGWQK
401: IGAIINLGSY YLVGVPSGLL LAFHFHVGGR GLWLGIICAL VVQVFGLGLV TIFTNWDEEA KKATNRIESS SSVKDFAVDD RSVVVF

Arabidopsis Description

DTX16Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178UMN3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.