Factsheet for VIT_11s0052g01570.t01

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 6
vacuole 6
plasma membrane 7
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_11s0052g01540.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	77.78	85.96
VIT_11s0052g01560.t01	Wine grape	vacuole	81.86	84.35
VIT_11s0052g01510.t01	Wine grape	golgi, peroxisome, plasma membrane	83.22	72.82
Solyc07g006730.2.1	Tomato	plasma membrane	72.11	65.03
PGSC0003DMT400065417	Potato	plasma membrane	69.61	64.36
PGSC0003DMT400078840	Potato	golgi, plasma membrane, vacuole	67.57	63.81
PGSC0003DMT400070650	Potato	plasma membrane	47.85	62.8
VIT_17s0000g02970.t01	Wine grape	plasma membrane	68.71	61.46
VIT_17s0000g02990.t01	Wine grape	plasma membrane	67.8	60.9
Solyc07g006740.2.1	Tomato	plasma membrane	64.85	60.72
PGSC0003DMT400048259	Potato	plasma membrane	64.85	59.96
PGSC0003DMT400070690	Potato	endoplasmic reticulum, plasma membrane, vacuole	61.22	59.08
VIT_01s0011g04460.t01	Wine grape	plasma membrane	59.41	57.71
VIT_17s0000g09270.t01	Wine grape	plasma membrane	57.82	56.92
VIT_17s0000g03000.t01	Wine grape	plasma membrane	55.1	51.27
VIT_01s0011g04430.t01	Wine grape	plasma membrane	50.34	46.15
VIT_01s0011g04450.t01	Wine grape	cytosol, golgi, plasma membrane	49.21	45.11
VIT_14s0006g02260.t01	Wine grape	plasma membrane	44.9	40.08
VIT_19s0014g02450.t01	Wine grape	plasma membrane	40.14	36.34
VIT_19s0014g02440.t01	Wine grape	plasma membrane	39.23	35.09

Protein Annotations

EntrezGene:100263305	wikigene:100263305	MapMan:24.2.4.1.1	ProteinID:CCB44603	ProteinID:CCB44603.1	UniProt:F6GXB7
EMBL:FN594964	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810	GO:GO:0006855
GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021	GO:GO:0055085
EntrezGene:LOC100263305	wikigene:LOC100263305	InterPro:MATE_fam	PFAM:PF01554	PANTHER:PTHR11206	PANTHER:PTHR11206:SF196
TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI00015CB5DA	ArrayExpress:VIT_11s0052g01570	EnsemblPlantsGene:VIT_11s0052g01570	EnsemblPlants:VIT_11s0052g01570.t01
RefSeq:XP_002270905	RefSeq:XP_002270905.1	:	:	:	:

Description

No Description!

Coordinates

chr11:-:19300828..19306424

Molecular Weight (calculated)

47973.1 Da

IEP (calculated)

9.172

GRAVY (calculated)

0.751

Length

441 amino acids

Sequence
(BLAST)

001: MSVNLLICSL QMISLMFVGH LGELALSGAS MATSFASVTG FSLLLGMGSA LDTFCGQSFG AKQYHMLGIH KQRAMVVLLL VSIPVAFIWS NTGYILASLG
101: QDPEISAEAG LYARFMIPSI FAFALLQCHI RFLQAQNNVV PMMITTGFTT LLHILTCWIL VFKSGLRNKG AALANAISCW MNVLLLAIYV RISPSCKKTW
201: MGFSREAMHD VPKFLRLAIP SAVMICLEIW SFEMMVLLSG LLPNPKLETS ALSISLNISS VIYMIPLGLS GAISVRVSNE LGAGRPQSAR LAIYVVLFMV
301: TIEGVLVATI LISGHKFWGY SYSNEEKVVK YVGEIMVLVA VSHFWDGIQT VLSGMVRGSG KQKIGALINL GAYYLVGIPF GALLAFVYHI GGKGLWTGII
401: VSLFMQAVSL AIIIFCTNWE REAKKATDRV HHDSIVPVNV A

Best Arabidopsis Sequence Match ( AT5G52450.1 )
(BLAST)

001: MRDDRERGEG DLSWPLIGEK SSVKEEVKKQ LWLSGPLIAV SLLQFCLQVI SVMFVGHLGS LPLSAASIAT SFASVTGFSF LMGTASALDT LCGQAYGAKK
101: YGMLGIQMQR AMFVLTLASI PLSIIWANTE HLLVFFGQNK SIATLAGSYA KFMIPSIFAY GLLQCFNRFL QAQNNVFPVV FCSGVTTSLH VLLCWVLVFK
201: SGLGFQGAAL ANSISYWLNV VLLFCYVKFS PSCSLTWTGF SKEALRDILP FLRLAVPSAL MVCLEMWSFE LLVLLSGLLP NPVLETSVLS ICLNTSGTMW
301: MIPFGLSGAA STRISNELGA GNPKVAKLAV RVVICIAVAE SIVIGSVLIL IRNIWGLAYS SELEVVSYVA SMMPILALGN FLDSLQCVLS GVARGCGWQK
401: IGAIINLGSY YLVGVPSGLL LAFHFHVGGR GLWLGIICAL VVQVFGLGLV TIFTNWDEEA KKATNRIESS SSVKDFAVDD RSVVVF

Arabidopsis Description

DTX16Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178UMN3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.