Subcellular Localization
min:
: max
Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane
Predictor Summary:
Predictor Summary:
- plastid 1
- endoplasmic reticulum 3
- plasma membrane 4
- extracellular 2
- vacuole 3
- golgi 2
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400048259 | Potato | plasma membrane | 74.62 | 71.49 |
| PGSC0003DMT400065417 | Potato | plasma membrane | 71.12 | 68.13 |
| VIT_11s0052g01540.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 54.7 | 62.66 |
| VIT_11s0052g01570.t01 | Wine grape | endoplasmic reticulum, plasma membrane, vacuole | 59.08 | 61.22 |
| VIT_11s0052g01560.t01 | Wine grape | vacuole | 56.24 | 60.05 |
| PGSC0003DMT400078840 | Potato | golgi, plasma membrane, vacuole | 61.27 | 59.96 |
| PGSC0003DMT400070650 | Potato | plasma membrane | 43.33 | 58.93 |
| VIT_11s0052g01510.t01 | Wine grape | golgi, peroxisome, plasma membrane | 61.93 | 56.15 |
| PGSC0003DMT400046664 | Potato | plasma membrane | 55.14 | 53.16 |
| PGSC0003DMT400014431 | Potato | plasma membrane | 57.11 | 52.73 |
| PGSC0003DMT400046656 | Potato | plasma membrane | 49.02 | 48.07 |
| PGSC0003DMT400046666 | Potato | plasma membrane | 51.2 | 47.85 |
| PGSC0003DMT400078374 | Potato | plasma membrane | 41.36 | 44.26 |
| PGSC0003DMT400078371 | Potato | plasma membrane | 42.67 | 42.95 |
| PGSC0003DMT400078716 | Potato | extracellular, plasma membrane, vacuole | 40.04 | 42.56 |
| PGSC0003DMT400043016 | Potato | cytosol, plasma membrane, vacuole | 42.45 | 41.36 |
| PGSC0003DMT400026959 | Potato | cytosol, plasma membrane, vacuole | 43.33 | 41.25 |
| PGSC0003DMT400015301 | Potato | plasma membrane | 42.89 | 40.58 |
| PGSC0003DMT400078715 | Potato | plasma membrane | 42.01 | 40.51 |
| PGSC0003DMT400054780 | Potato | plasma membrane | 28.67 | 34.84 |
| PGSC0003DMT400049147 | Potato | plasma membrane | 35.23 | 33.13 |
| PGSC0003DMT400064458 | Potato | plasma membrane | 28.67 | 31.95 |
| PGSC0003DMT400014996 | Potato | plasma membrane | 29.76 | 31.05 |
| PGSC0003DMT400054764 | Potato | plasma membrane | 35.45 | 30.74 |
Protein Annotations
| MapMan:24.2.4.1.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006855 |
| GO:GO:0008150 | GO:GO:0015238 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 |
| UniProt:M1CMJ6 | InterPro:MATE_fam | PFAM:PF01554 | EnsemblPlantsGene:PGSC0003DMG400027479 | PGSC:PGSC0003DMG400027479 | EnsemblPlants:PGSC0003DMT400070690 |
| PANTHER:PTHR11206 | PANTHER:PTHR11206:SF196 | TIGRFAMs:TIGR00797 | TMHMM:TMhelix | UniParc:UPI000295A337 | SEG:seg |
Description
Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400027479]
Coordinates
chr7:-:2385528..2387862
Molecular Weight (calculated)
49215.4 Da
IEP (calculated)
8.403
GRAVY (calculated)
0.712
Length
457 amino acids
Sequence
(BLAST)
(BLAST)
001: MDTQPRKNLE VFAEVKKLLA LAMPLMLVHL LLFFLQVISV MFVGHRGELA LSGASLATSF AFVTGFSLLL GMGSALETLC GQAYGATQHH MLGIYMQSGM
101: AVSLMVSVPI ACIWANAGRI LVILRQDPEI AAEAGIYARF MIPSIFAYGL IECQIKFLQT QNIIKPMMLT TGITLLLHVL SCWILVLKTD LGSSGAALAN
201: ALSYWINMFL LAAYIRISPS CESTWTGFSR EALSDIPRYL RLAIPSALMS CSEIWSFEML VLSSGLLPNP KLETSVLSIS LNTSAVFHTL SEGLGGATSV
301: RVSNELGAGE PQSARVAARA ATLLATGEGT LIAVFMILVR KVWGHCYSNE ATVVRYVAEM LFFIAGSHFI DAHKCVVTGI ASGCGLQKKG AFVNLGAYCL
401: LGLPTGMVLA FVYHIGGKGL WLGIIVALSA QTLIYLVVVL RTNWDKLAMK AAERISS
101: AVSLMVSVPI ACIWANAGRI LVILRQDPEI AAEAGIYARF MIPSIFAYGL IECQIKFLQT QNIIKPMMLT TGITLLLHVL SCWILVLKTD LGSSGAALAN
201: ALSYWINMFL LAAYIRISPS CESTWTGFSR EALSDIPRYL RLAIPSALMS CSEIWSFEML VLSSGLLPNP KLETSVLSIS LNTSAVFHTL SEGLGGATSV
301: RVSNELGAGE PQSARVAARA ATLLATGEGT LIAVFMILVR KVWGHCYSNE ATVVRYVAEM LFFIAGSHFI DAHKCVVTGI ASGCGLQKKG AFVNLGAYCL
401: LGLPTGMVLA FVYHIGGKGL WLGIIVALSA QTLIYLVVVL RTNWDKLAMK AAERISS
001: MKKSIETPLL LNTKQSQDED KEKIRWEKMK KVASMAAPMV AVNMSQYLLQ ATSTMIVGHR SELALAGIAL GSSFANVTGF GVLFGLSGSL ETLCGQAYGA
101: KQYHKLGSYT FTSIVFLLII SVPISILWMF MNQILLLLHQ DPQIAELAGV YCLWLVPALF GYSVLESLVR YFQSQSLIYP MVLSSLAALS FHVPLCWLMV
201: HKFDFGAKGA AASIGISYWL NAVFLWVYMK RSSRCVETRI YMSKDVFVHT NIFFQFAIPS AMMCCLEWLA FEVITLLSGL LPNSKLETSV ISICLTTSSL
301: HYNLVNGIGD AASTNVANEL GAGNPRGARD SAAAAIIIAA VESVIVSSSL FLSRSVWPYA YSNVEEVISY VTDITPILCI SILMDSFLTV LSGIVRGTGW
401: QKIGAYVNIT SYYVIGIPVG LLLCFHLHFN GKGLWAGLVT GSTLQTLILF LVIGFTNWSK EAIKARERIG DEKVWRHDSL LN
101: KQYHKLGSYT FTSIVFLLII SVPISILWMF MNQILLLLHQ DPQIAELAGV YCLWLVPALF GYSVLESLVR YFQSQSLIYP MVLSSLAALS FHVPLCWLMV
201: HKFDFGAKGA AASIGISYWL NAVFLWVYMK RSSRCVETRI YMSKDVFVHT NIFFQFAIPS AMMCCLEWLA FEVITLLSGL LPNSKLETSV ISICLTTSSL
301: HYNLVNGIGD AASTNVANEL GAGNPRGARD SAAAAIIIAA VESVIVSSSL FLSRSVWPYA YSNVEEVISY VTDITPILCI SILMDSFLTV LSGIVRGTGW
401: QKIGAYVNIT SYYVIGIPVG LLLCFHLHFN GKGLWAGLVT GSTLQTLILF LVIGFTNWSK EAIKARERIG DEKVWRHDSL LN
Arabidopsis Description
DTX9Protein DETOXIFICATION 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9M8]
SUBAcon: [peroxisome,cytosol,plasma membrane]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.