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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane, vacuole, cytosol

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane, vacuole
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc03g034400.2.1 Tomato cytosol, plasma membrane, vacuole 95.31 95.11
PGSC0003DMT400078715 Potato plasma membrane 73.13 72.36
PGSC0003DMT400026959 Potato cytosol, plasma membrane, vacuole 60.55 59.17
GSMUA_Achr3P29080_001 Banana plasma membrane 54.37 57.56
PGSC0003DMT400078716 Potato extracellular, plasma membrane, vacuole 51.39 56.05
GSMUA_Achr4P03730_001 Banana endoplasmic reticulum, plasma membrane, vacuole 52.88 55.98
PGSC0003DMT400078374 Potato plasma membrane 49.25 54.1
KRH01699 Soybean plasma membrane 46.27 53.45
KRH70420 Soybean plasma membrane 53.73 52.94
PGSC0003DMT400078371 Potato plasma membrane 51.17 52.86
Zm00001d009494_P001 Maize plasma membrane 52.67 52.67
AT1G66780.1 Thale cress plasma membrane 52.88 51.13
KRH56518 Soybean plasma membrane 52.45 50.62
EES03448 Sorghum plasma membrane 52.45 50.31
OQU78400 Sorghum cytosol, plasma membrane, vacuole 53.52 50.2
Zm00001d043838_P002 Maize plasma membrane 52.03 50.1
KRH70422 Soybean plasma membrane 51.39 50.0
KRG93178 Soybean plasma membrane 53.09 50.0
Bra035241.1-P Field mustard plasma membrane 53.3 50.0
CDX86801 Canola plasma membrane 53.3 49.9
PGSC0003DMT400015301 Potato plasma membrane 51.39 49.9
Os01t0684900-01 Rice plasma membrane 52.03 49.69
CDY13241 Canola plasma membrane 53.09 49.31
KRH01702 Soybean plasma membrane 40.72 49.23
TraesCS3A01G229400.1 Wheat plasma membrane 41.79 49.12
CDX96130 Canola plasma membrane 49.25 48.94
CDY36231 Canola plasma membrane 47.33 48.79
TraesCS3A01G265100.1 Wheat plasma membrane 50.11 48.65
Bra004188.1-P Field mustard plasma membrane 47.97 48.6
CDY50255 Canola cytosol, peroxisome, vacuole 24.73 48.54
TraesCS3B01G298700.1 Wheat cytosol, plasma membrane, vacuole 49.89 48.45
AT2G04100.1 Thale cress plasma membrane 49.89 48.45
TraesCS2B01G229100.1 Wheat plasma membrane 50.11 48.35
TraesCS3D01G265400.1 Wheat plasma membrane 49.68 48.24
TraesCS1B01G016700.1 Wheat plasma membrane 34.33 48.2
TraesCSU01G003900.1 Wheat cytosol, plasma membrane, vacuole 50.75 48.18
TraesCS1A01G380900.1 Wheat plasma membrane 50.53 48.07
Os05t0554000-01 Rice cytosol, peroxisome, plasma membrane 41.79 48.04
AT1G64820.1 Thale cress plasma membrane 51.39 48.01
CDY36229 Canola plasma membrane 50.53 47.98
TraesCS1D01G388600.1 Wheat plasma membrane 50.32 47.97
TraesCS3D01G227600.2 Wheat plasma membrane 48.61 47.7
TraesCS3B01G255200.2 Wheat plasma membrane 48.61 47.7
AT2G04040.1 Thale cress vacuole 48.4 47.69
Bra015133.1-P Field mustard plasma membrane 49.04 47.62
CDY50254 Canola plasma membrane 49.04 47.62
CDY27886 Canola plasma membrane 49.04 47.62
TraesCS2D01G214300.1 Wheat plasma membrane 49.25 47.53
AT1G66760.2 Thale cress cytosol, peroxisome, plasma membrane 48.83 47.51
AT2G04090.1 Thale cress plasma membrane 48.19 47.38
CDX87974 Canola cytosol, peroxisome, plasma membrane 47.76 47.36
CDY71754 Canola plasma membrane 26.65 47.35
CDX81843 Canola plasma membrane 47.97 47.27
Bra013214.1-P Field mustard plasma membrane 47.97 47.27
CDY15087 Canola plasma membrane 47.76 47.06
AT2G04050.1 Thale cress plasma membrane 47.76 47.06
HORVU1Hr1G084190.9 Barley mitochondrion, peroxisome, plasma membrane 49.68 46.98
Bra015208.1-P Field mustard cytosol, peroxisome, plasma membrane 47.97 46.68
CDY12351 Canola cytosol, peroxisome, plasma membrane 47.55 46.27
CDX96129 Canola plasma membrane 50.96 46.14
CDY21736 Canola plasma membrane 46.7 46.01
AT2G04080.1 Thale cress plasma membrane 46.7 46.01
PGSC0003DMT400046664 Potato plasma membrane 46.27 45.78
Zm00001d027921_P002 Maize plasma membrane 48.4 45.77
Os01t0504500-02 Rice plasma membrane 48.61 45.42
Bra030999.1-P Field mustard plasma membrane 41.36 45.33
TraesCS2A01G202000.1 Wheat plasma membrane 49.47 45.31
EER95390 Sorghum plasma membrane 48.61 45.15
HORVU2Hr1G039850.10 Barley peroxisome, plasma membrane, plastid 48.4 45.04
CDY36230 Canola plasma membrane 51.39 44.96
TraesCS1D01G009800.1 Wheat plasma membrane 47.55 44.51
CDY72452 Canola cytosol, extracellular, mitochondrion 8.74 44.09
PGSC0003DMT400065417 Potato plasma membrane 44.78 44.03
PGSC0003DMT400078840 Potato golgi, plasma membrane, vacuole 42.86 43.04
PGSC0003DMT400014431 Potato plasma membrane 44.99 42.63
PGSC0003DMT400070690 Potato endoplasmic reticulum, plasma membrane, vacuole 41.36 42.45
PGSC0003DMT400046666 Potato plasma membrane 43.71 41.92
PGSC0003DMT400046656 Potato plasma membrane 41.58 41.85
PGSC0003DMT400048259 Potato plasma membrane 41.36 40.67
PGSC0003DMT400054780 Potato plasma membrane 31.34 39.1
PGSC0003DMT400070650 Potato plasma membrane 27.51 38.39
PGSC0003DMT400049147 Potato plasma membrane 38.17 36.83
PGSC0003DMT400054764 Potato plasma membrane 37.1 33.02
PGSC0003DMT400014996 Potato plasma membrane 30.7 32.88
PGSC0003DMT400064458 Potato plasma membrane 27.72 31.71
Bra015131.1-P Field mustard cytosol 46.7 28.78
Bra004187.1-P Field mustard plasma membrane 50.53 26.87
HORVU3Hr1G063430.3 Barley plastid 30.28 25.27
Protein Annotations
EnsemblPlants:PGSC0003DMT400043016EnsemblPlantsGene:PGSC0003DMG400016683GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085InterPro:MATE_famPANTHER:PTHR11206PANTHER:PTHR11206:SF254PFAM:PF01554PGSC:PGSC0003DMG400016683
TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI000296D5A8UniProt:M1BDX4MapMan:24.2.4.1.1:
Description
MATE transporter [Source:PGSC_GENE;Acc:PGSC0003DMG400016683]
Coordinates
chr3:-:5342258..5351006
Molecular Weight (calculated)
51551.1 Da
IEP (calculated)
7.144
GRAVY (calculated)
0.720
Length
469 amino acids
Sequence
(BLAST)
001: MEEAFLLPEK RESLRTTTWD SLLEAMKKVC YIAIPMIVVN VSQHLIRVLS MMMLGHLSEL SLSGASIATS LTNVTGFSLL LGMASGLETL CGQAYGAEQY
101: KKLGIYTTGA IISLLLVCIP ISILWLFMDK ILIFMHQDPL ISIEAGKYSI WLLISLFPSA ILQALTRYLQ TQSLILPMVV SSIATLCFHV PICWLCVFTL
201: DFGSVGAAFS IGLSYWFNLL LLGLYVKYSK SCEKTRLYFS KEEVLASIRE FFPLAIPSAC MVCLEWWTFE IVILLAGVLP NPQLETSVLS ICLLIASTHY
301: FLPFSLGAGA STRVSNELGA GNHEAAKMAV RAALTISMAD AIISGSIFYC CRHIVGYAFS NEKEVADYIS KMAPFLCILM VSDCIQGVLS GVARGSGWQH
401: LGAYVNLGSF YLAGIPTAII CGFLFHLQGK GLWIGLNVGN VLQSLLLSLI TSFTNWEKQA SIARERIFY
Best Arabidopsis Sequence Match ( AT1G64820.1 )
(BLAST)
001: METDFSLVRK EEEEEEDNRN GMSYLSMEMM KKVSSMAAPM VAVSVSQFLL QVISMVMAGH LDELSLSAVA IATSLTNVTG FSLIVGFAGA LDTLCGQAFG
101: AEQFGKIGAY TYSSMLCLLV FCFSISIVWF FMDKLLEIFH QDPLISQLAC RYSIWLIPAL FGFTLLQPMT RYFQSQGITL PLFVSSLGAL CFHIPFCWLL
201: VYKLKFGIVG AALSIGFSYW LNVFLLWIFM RYSALHREMK NLGLQELISS MKQFIALAIP SAMMICLEWW SFEILLLMSG LLPNSKLETS VISICLTTSA
301: VHFVLVNAIG ASASTHVSNE LGAGNHRAAR AAVNSAIFLG GVGALITTIT LYSYRKSWGY VFSNEREVVR YATQITPILC LSIFVNSFLA VLSGVARGSG
401: WQRIGGYASL GSYYLVGIPL GWFLCFVMKL RGKGLWIGIL IASTIQLIVF ALVTFFTNWE QEATKARDRV FEMTPQVKGN QKTQIIVEED TQVLLNHIAE
501: TV
Arabidopsis Description
DTX7Protein DETOXIFICATION 7 [Source:UniProtKB/Swiss-Prot;Acc:Q1PFG9]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.