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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, peroxisome, vacuole

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • mitochondrion 1
  • vacuole 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, vacuole
Any Predictor:cytosol, nucleus, peroxisome
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:mitochondrion
WoLF PSORT:vacuole
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY71754 Canola plasma membrane 79.92 72.35
CDX81843 Canola plasma membrane 86.19 43.28
CDY21736 Canola plasma membrane 84.1 42.23
CDY15087 Canola plasma membrane 82.01 41.18
CDY27886 Canola plasma membrane 74.48 36.85
CDY50254 Canola plasma membrane 74.48 36.85
CDY72127 Canola plasma membrane 40.59 30.5
Bra015131.1-P Field mustard cytosol 96.65 30.35
Os05t0554000-01 Rice cytosol, peroxisome, plasma membrane 48.12 28.19
KRH01702 Soybean plasma membrane 44.77 27.58
Solyc02g063270.2.1 Tomato plasma membrane 47.7 25.11
PGSC0003DMT400078715 Potato plasma membrane 49.79 25.11
Solyc02g091050.2.1 Tomato plasma membrane 49.37 24.89
Solyc03g034400.2.1 Tomato cytosol, plasma membrane, vacuole 48.95 24.89
KRH70420 Soybean plasma membrane 49.37 24.79
PGSC0003DMT400043016 Potato cytosol, plasma membrane, vacuole 48.54 24.73
CDY71492 Canola plasma membrane 44.77 24.65
CDY36231 Canola plasma membrane 46.86 24.62
CDX96130 Canola plasma membrane 48.12 24.36
Zm00001d009494_P001 Maize plasma membrane 47.7 24.31
CDY36229 Canola plasma membrane 50.21 24.29
EES03448 Sorghum plasma membrane 48.95 23.93
CDY67968 Canola plasma membrane 47.7 23.55
GSMUA_Achr3P29080_001 Banana plasma membrane 43.51 23.48
Zm00001d043838_P002 Maize plasma membrane 47.7 23.41
OQU78400 Sorghum cytosol, plasma membrane, vacuole 48.95 23.4
CDY13241 Canola plasma membrane 49.37 23.37
PGSC0003DMT400026959 Potato cytosol, plasma membrane, vacuole 46.86 23.33
Solyc02g063260.2.1 Tomato plasma membrane 47.7 23.17
CDX86801 Canola plasma membrane 48.54 23.15
GSMUA_Achr4P03730_001 Banana endoplasmic reticulum, plasma membrane, vacuole 42.68 23.02
CDY49220 Canola plasma membrane 46.86 23.0
KRH01699 Soybean plasma membrane 38.91 22.91
CDX96304 Canola plasma membrane 46.86 22.9
CDX72778 Canola plasma membrane 46.86 22.81
CDX68324 Canola plasma membrane 46.44 22.79
CDX96129 Canola plasma membrane 49.37 22.78
TraesCS1D01G388600.1 Wheat plasma membrane 46.86 22.76
TraesCS1A01G380900.1 Wheat plasma membrane 46.86 22.72
TraesCSU01G003900.1 Wheat cytosol, plasma membrane, vacuole 46.86 22.67
Os01t0684900-01 Rice plasma membrane 46.44 22.61
CDY36230 Canola plasma membrane 50.21 22.39
CDY36531 Canola plasma membrane 44.77 22.29
CDY39617 Canola plasma membrane 44.77 22.29
CDX81701 Canola plasma membrane 44.77 22.29
HORVU1Hr1G084190.9 Barley mitochondrion, peroxisome, plasma membrane 46.03 22.18
KRG93178 Soybean plasma membrane 46.03 22.09
CDY52017 Canola plasma membrane 44.35 22.08
KRH56518 Soybean plasma membrane 44.77 22.02
TraesCS3B01G255200.2 Wheat plasma membrane 43.51 21.76
TraesCS3D01G227600.2 Wheat plasma membrane 43.1 21.55
TraesCS3B01G298700.1 Wheat cytosol, plasma membrane, vacuole 43.51 21.53
TraesCS3A01G265100.1 Wheat plasma membrane 43.51 21.53
CDX87974 Canola cytosol, peroxisome, plasma membrane 42.26 21.35
TraesCS3D01G265400.1 Wheat plasma membrane 43.1 21.33
KRH70422 Soybean plasma membrane 42.26 20.95
CDY12351 Canola cytosol, peroxisome, plasma membrane 42.26 20.95
CDY68867 Canola plasma membrane 41.0 20.94
CDY60134 Canola plasma membrane 40.17 20.3
TraesCS2D01G214300.1 Wheat plasma membrane 41.0 20.16
CDY49289 Canola plasma membrane 41.42 20.16
CDX72467 Canola plasma membrane 41.0 20.0
TraesCS2B01G229100.1 Wheat plasma membrane 40.59 19.96
Zm00001d027921_P002 Maize plasma membrane 40.17 19.35
TraesCS2A01G202000.1 Wheat plasma membrane 41.0 19.14
CDX91652 Canola plasma membrane 38.91 19.14
Os01t0504500-02 Rice plasma membrane 40.17 19.12
CDY27066 Canola plasma membrane 38.49 18.89
HORVU2Hr1G039850.10 Barley peroxisome, plasma membrane, plastid 39.75 18.85
CDX83993 Canola plasma membrane 34.31 18.72
CDX79559 Canola plasma membrane 38.08 18.69
CDY00530 Canola plasma membrane 37.66 18.59
TraesCS3A01G229400.1 Wheat plasma membrane 30.96 18.55
EER95390 Sorghum plasma membrane 38.91 18.42
CDX84324 Canola plasma membrane 37.24 18.39
CDY54775 Canola plasma membrane 37.24 18.2
CDX77471 Canola plasma membrane 29.71 17.97
TraesCS1D01G009800.1 Wheat plasma membrane 37.66 17.96
CDY65688 Canola plasma membrane 27.62 17.32
CDY17238 Canola plasma membrane 36.82 17.29
CDY09031 Canola plasma membrane 33.89 17.05
CDY18116 Canola plasma membrane 34.31 17.01
CDX73002 Canola plasma membrane 28.45 17.0
CDY17027 Canola plasma membrane 28.03 16.75
CDY18118 Canola plasma membrane 29.29 15.56
CDX68215 Canola plasma membrane 17.15 11.85
TraesCS1B01G016700.1 Wheat plasma membrane 15.9 11.38
CDX84649 Canola vacuole 38.08 9.38
HORVU3Hr1G063430.3 Barley plastid 16.74 7.12
CDY18117 Canola cytosol, extracellular, plasma membrane 0.0 0.0
CDY72452 Canola cytosol, extracellular, mitochondrion 0.0 0.0
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078IH49UniProt:A0A078IH49EnsemblPlants:CDY50255ProteinID:CDY50255ProteinID:CDY50255.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150
GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00096243001
InterPro:MATE_famPFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF189TMHMM:TMhelixUniParc:UPI0004EEC3D3
Description
BnaC07g47900DBnaC07g47900D protein [Source:UniProtKB/TrEMBL;Acc:A0A078IH49]
Coordinates
chrLK032893:+:81051..81932
Molecular Weight (calculated)
26146.4 Da
IEP (calculated)
8.559
GRAVY (calculated)
0.690
Length
239 amino acids
Sequence
(BLAST)
001: MEEPFLIREE QLVPSTRTWH RGQLTVELKK VCRLAAPMAT VTSAQYLLPV ISVMVAGHNG ELQLSGVALA TSFTNVSGFS IMYGLAGALE TLCGQAYGAK
101: QYEKLGTYTY SAIASNIPIC FLISTLWIYM DKLLVSLGQD PDISRVAGSY AFSLIPALFG QAIVIPLTRF LLTQGLVLPL LYCAVTTLLF HISVCWILVF
201: KFGLGSNGAA LSISVSFWFY AVILACYVRF STGKNRLFL
Best Arabidopsis Sequence Match ( AT2G04040.1 )
(BLAST)
001: MEEPFLLRDE LLVPSQVTWH TNPLTVELKR VSRLAAPMAT VTIAQYLLPV ISVMVAGHNG ELQLSGVALA NSFTNVTGFS IMCGLVGALE TLCGQAYGAK
101: QYEKIGTYAY SAIASNIPIC FLISILWLYI EKILISLGQD PEISRIAGSY AFWLIPALFG QAIVIPLSRF LLTQGLVIPL LFTAVTTLLF HVLVCWTLVF
201: LFGLGCNGPA MATSVSFWFY AVILSCYVRF SSSCEKTRGF VSRDFVSSIK QFFQYGIPSA AMICLEWWLF EILILCSGLL PNPKLETSVL SICLTIETLH
301: YVISAGVAAA VSTRVSNNLG AGNPQVARVS VLAGLCLWIV ESAFFSILLF TCRNIIGYAF SNSKEVLDYV ADLTPLLCLS FILDGFTAVL NGVARGSGWQ
401: HIGAWNNTVS YYLVGAPVGI YLAFSRELNG KGLWCGVVVG STVQATILAI VTASINWKEQ AEKARKRIVS TENRLA
Arabidopsis Description
DTX1Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178VPK7]
SUBAcon: [vacuole]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.