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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • extracellular 1
  • golgi 1
  • endoplasmic reticulum 2
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:endoplasmic reticulum
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d043838_P002 Maize plasma membrane 94.07 94.46
TraesCS3D01G265400.1 Wheat plasma membrane 79.14 80.12
TraesCS3B01G298700.1 Wheat cytosol, plasma membrane, vacuole 78.94 79.92
TraesCS3A01G265100.1 Wheat plasma membrane 78.73 79.71
TraesCS3B01G255200.2 Wheat plasma membrane 77.91 79.71
TraesCS3D01G227600.2 Wheat plasma membrane 77.91 79.71
Os01t0684900-01 Rice plasma membrane 79.75 79.43
TraesCS3A01G229400.1 Wheat plasma membrane 64.62 79.2
GSMUA_Achr3P29080_001 Banana plasma membrane 60.12 66.37
OQU78400 Sorghum cytosol, plasma membrane, vacuole 66.87 65.4
GSMUA_Achr4P03730_001 Banana endoplasmic reticulum, plasma membrane, vacuole 57.87 63.88
VIT_01s0011g04450.t01 Wine grape cytosol, golgi, plasma membrane 57.06 58.0
CDY72127 Canola plasma membrane 37.01 56.92
PGSC0003DMT400078716 Potato extracellular, plasma membrane, vacuole 49.9 56.74
KRH35832 Soybean plasma membrane 53.78 55.37
VIT_01s0011g04430.t01 Wine grape plasma membrane 53.78 54.68
Solyc02g091050.2.1 Tomato plasma membrane 52.76 54.43
PGSC0003DMT400078374 Potato plasma membrane 47.24 54.1
Solyc04g007530.2.1 Tomato plasma membrane 53.17 54.05
PGSC0003DMT400078715 Potato plasma membrane 52.35 54.01
PGSC0003DMT400015301 Potato plasma membrane 53.17 53.83
KRG90944 Soybean plasma membrane 52.35 53.78
Solyc05g008510.2.1 Tomato plasma membrane 52.56 53.77
Bra003935.1-P Field mustard plasma membrane 50.51 53.58
Solyc02g091070.2.1 Tomato plasma membrane 51.53 53.5
KRG90943 Soybean plasma membrane 44.38 53.06
KRH35829 Soybean golgi, nucleus, vacuole 51.74 53.04
VIT_14s0006g02260.t01 Wine grape plasma membrane 53.58 53.04
KRH53068 Soybean plasma membrane 51.94 52.92
PGSC0003DMT400078371 Potato plasma membrane 49.08 52.86
KRH70431 Soybean plasma membrane 51.33 52.84
CDX96304 Canola plasma membrane 52.76 52.76
Solyc02g063270.2.1 Tomato plasma membrane 48.88 52.64
CDY49220 Canola plasma membrane 52.35 52.57
CDX72778 Canola plasma membrane 52.76 52.55
EER95390 Sorghum plasma membrane 54.19 52.48
PGSC0003DMT400043016 Potato cytosol, plasma membrane, vacuole 50.31 52.45
Bra016158.1-P Field mustard plasma membrane 52.56 52.45
CDX68324 Canola plasma membrane 52.15 52.36
Solyc03g034400.2.1 Tomato cytosol, plasma membrane, vacuole 50.31 52.34
KRH01699 Soybean plasma membrane 43.35 52.22
AT1G71140.1 Thale cress plasma membrane 51.53 51.96
KRH01698 Soybean plasma membrane 50.92 51.88
CDY67968 Canola plasma membrane 51.33 51.86
PGSC0003DMT400026959 Potato cytosol, plasma membrane, vacuole 50.72 51.67
KRH35828 Soybean plasma membrane 50.31 51.46
KRH56353 Soybean plasma membrane 50.51 51.46
KXG21780 Sorghum plasma membrane 46.42 50.44
KRH56518 Soybean plasma membrane 50.1 50.41
Bra007964.1-P Field mustard cytosol, golgi, plasma membrane 50.51 50.0
CDY71492 Canola plasma membrane 44.38 50.0
AT1G15170.1 Thale cress plasma membrane 49.08 49.9
KRH35833 Soybean plasma membrane 46.63 49.67
Solyc02g063260.2.1 Tomato plasma membrane 49.9 49.59
CDX81701 Canola plasma membrane 48.67 49.58
Solyc05g008500.1.1 Tomato plasma membrane 45.81 49.12
KRH70422 Soybean plasma membrane 48.26 48.96
CDY50255 Canola cytosol, peroxisome, vacuole 23.93 48.95
Bra026160.1-P Field mustard plasma membrane 47.85 48.85
KRG93178 Soybean plasma membrane 49.69 48.8
CDY36531 Canola plasma membrane 47.65 48.54
CDY39617 Canola plasma membrane 47.65 48.54
AT1G15150.1 Thale cress plasma membrane 48.26 48.46
CDX77471 Canola plasma membrane 39.06 48.35
KXG19962 Sorghum plasma membrane 47.24 48.23
KRH70420 Soybean plasma membrane 46.83 48.11
Bra026778.1-P Field mustard plasma membrane 47.03 47.82
AT1G15180.1 Thale cress plasma membrane 47.03 47.72
Bra015133.1-P Field mustard plasma membrane 47.03 47.62
CDY27886 Canola plasma membrane 47.03 47.62
CDY50254 Canola plasma membrane 47.03 47.62
CDY52017 Canola plasma membrane 46.42 47.29
CDX96130 Canola plasma membrane 45.6 47.25
AT1G15160.1 Thale cress plasma membrane 47.03 47.23
AT1G66780.1 Thale cress plasma membrane 46.83 47.22
KRH01702 Soybean plasma membrane 37.42 47.16
AT2G04100.1 Thale cress plasma membrane 46.42 47.0
AT1G66760.2 Thale cress cytosol, peroxisome, plasma membrane 46.22 46.89
EES06698 Sorghum plasma membrane 46.01 46.88
CDX86801 Canola plasma membrane 47.65 46.51
Bra016671.1-P Field mustard plasma membrane 45.81 46.47
KXG26020 Sorghum plasma membrane 45.6 46.46
Bra035241.1-P Field mustard plasma membrane 47.44 46.4
AT2G04090.1 Thale cress plasma membrane 45.19 46.33
EES06697 Sorghum plasma membrane 46.01 46.2
CDY36229 Canola plasma membrane 46.63 46.15
CDY13241 Canola plasma membrane 47.44 45.94
CDX87974 Canola cytosol, peroxisome, plasma membrane 44.38 45.88
CDX81843 Canola plasma membrane 44.58 45.8
OQU80064 Sorghum plasma membrane 27.81 45.79
Solyc02g091080.1.1 Tomato golgi, peroxisome, plasma membrane 47.44 45.76
CDY36231 Canola plasma membrane 42.54 45.71
OQU77813 Sorghum plasma membrane 44.17 45.57
CDX83993 Canola plasma membrane 40.7 45.43
AT2G04050.1 Thale cress plasma membrane 44.17 45.38
Bra013214.1-P Field mustard plasma membrane 44.17 45.38
Bra004188.1-P Field mustard plasma membrane 42.94 45.36
Bra015208.1-P Field mustard cytosol, peroxisome, plasma membrane 44.58 45.23
CDY21736 Canola plasma membrane 43.97 45.17
CDY71754 Canola plasma membrane 24.34 45.08
KRG90942 Soybean plasma membrane 51.12 45.05
AT2G04040.1 Thale cress vacuole 43.56 44.75
CDY12351 Canola cytosol, peroxisome, plasma membrane 43.97 44.61
AT2G04080.1 Thale cress plasma membrane 43.15 44.33
CDY15087 Canola plasma membrane 43.15 44.33
CDY72452 Canola cytosol, extracellular, mitochondrion 8.38 44.09
CDX96129 Canola plasma membrane 45.81 43.24
Bra030999.1-P Field mustard plasma membrane 37.83 43.22
AT1G64820.1 Thale cress plasma membrane 43.97 42.83
CDY36230 Canola plasma membrane 45.6 41.6
KXG30060 Sorghum plasma membrane 42.74 40.9
EER90350 Sorghum plasma membrane 40.08 40.58
HORVU3Hr1G063430.3 Barley plastid 43.97 38.26
Bra014999.1-P Field mustard plasma membrane 43.97 37.99
OQU88303 Sorghum cytosol, peroxisome, plasma membrane 37.42 36.17
OQU77045 Sorghum plastid 28.02 33.33
EER99421 Sorghum plasma membrane 37.22 30.74
Bra015131.1-P Field mustard cytosol 46.83 30.09
Bra004187.1-P Field mustard plasma membrane 45.6 25.28
Protein Annotations
MapMan:24.2.4.1.1EntrezGene:8063072UniProt:C5XGT1EnsemblPlants:EES03448ProteinID:EES03448ProteinID:EES03448.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150
GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:MATE_fam
PFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF139EnsemblPlantsGene:SORBI_3003G260200TIGRFAMs:TIGR00797TMHMM:TMhelix
UniParc:UPI0001A84B1DRefSeq:XP_002458328.1SEG:seg:::
Description
hypothetical protein
Coordinates
chr3:-:59802657..59807340
Molecular Weight (calculated)
52681.3 Da
IEP (calculated)
8.083
GRAVY (calculated)
0.619
Length
489 amino acids
Sequence
(BLAST)
001: MAAAREEDEA TQARPLLLPR RPAQEDQKWW RRWAREAGWV GYLALPMVVV NLSQYAVQVS SNMMVGHLPG VLPLSSAAIA TSLANVSGFS LLIGLASALE
101: TLCGQAYGAK QYHKLGLDTY RAIVTLLVVC IPLSLLWVFM DKILVLIGQD PLISQGAGRY MIWMIPGLFA NAVIQPLTKF LQTQSLIYPL LLSSVATAAI
201: HIPLCYVMVF KTGLGYTGAA LTISISYWLN VAMLVGYIVF SSSCKETRAR PTIEVFRGVD AFLRLALPSA LMMCFEWWSF ELLTLMSGLL PNPELQTSVL
301: SICLTSVTLL FTIPFGLGAA GSTRVANELG AGNPDGARSA VRVVLSMAGI DAVIVSGTLL AARRLVGLAY SSEEEVISSV AAMVPLVCIT VITDCLQGVL
401: SGVARGCGWQ HLGAYVNLGS FYLLGIPMAI LLGFVLHMGS RGLWMGIVCG SLSQTTLMSA ITFFTDWPKM AEKARERVFS DKAHESAGP
Best Arabidopsis Sequence Match ( AT1G71140.1 )
(BLAST)
001: MDSAEKGLLV VSDREEVNKK DGFLRETKKL SYIAGPMIAV NSSMYVLQVI SIMMVGHLGE LFLSSTAIAV SFCSVTGFSV VFGLASALET LCGQANGAKQ
101: YEKLGVHTYT GIVSLFLVCI PLSLLWTYIG DILSLIGQDA MVAQEAGKFA TWLIPALFGY ATLQPLVRFF QAQSLILPLV MSSVSSLCIH IVLCWSLVFK
201: FGLGSLGAAI AIGVSYWLNV TVLGLYMTFS SSCSKSRATI SMSLFEGMGE FFRFGIPSAS MICLEWWSFE FLVLLSGILP NPKLEASVLS VCLSTQSSLY
301: QIPESLGAAA STRVANELGA GNPKQARMAV YTAMVITGVE SIMVGAIVFG ARNVFGYLFS SETEVVDYVK SMAPLLSLSV IFDALHAALS GVARGSGRQD
401: IGAYVNLAAY YLFGIPTAIL LAFGFKMRGR GLWIGITVGS CVQAVLLGLI VILTNWKKQA RKARERVMGD EYEEKESEEE HEYIS
Arabidopsis Description
DTX14Protein DETOXIFICATION 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9C994]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.