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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY71492 Canola plasma membrane 86.67 95.85
CDY39617 Canola plasma membrane 89.58 89.58
CDY36531 Canola plasma membrane 88.96 88.96
CDY52017 Canola plasma membrane 82.92 82.92
AT1G15180.1 Thale cress plasma membrane 82.29 81.95
AT1G15170.1 Thale cress plasma membrane 82.08 81.91
CDX83993 Canola plasma membrane 73.96 81.05
AT1G15160.1 Thale cress plasma membrane 79.17 78.03
AT1G15150.1 Thale cress plasma membrane 78.96 77.82
VIT_01s0011g04450.t01 Wine grape cytosol, golgi, plasma membrane 59.17 59.04
KRG90944 Soybean plasma membrane 57.5 57.98
KRH35832 Soybean plasma membrane 56.88 57.47
KRH35829 Soybean golgi, nucleus, vacuole 57.08 57.44
VIT_01s0011g04430.t01 Wine grape plasma membrane 57.5 57.38
KRH35828 Soybean plasma membrane 57.08 57.32
PGSC0003DMT400078374 Potato plasma membrane 50.42 56.67
Solyc05g008510.2.1 Tomato plasma membrane 55.83 56.07
KRH53068 Soybean plasma membrane 55.62 55.62
PGSC0003DMT400078371 Potato plasma membrane 52.5 55.51
PGSC0003DMT400015301 Potato plasma membrane 54.17 53.83
Solyc04g007530.2.1 Tomato plasma membrane 53.75 53.64
GSMUA_Achr3P29080_001 Banana plasma membrane 49.17 53.27
Solyc05g008500.1.1 Tomato plasma membrane 49.38 51.97
GSMUA_Achr4P03730_001 Banana endoplasmic reticulum, plasma membrane, vacuole 47.92 51.92
TraesCS3A01G229400.1 Wheat plasma membrane 42.92 51.63
CDY72127 Canola plasma membrane 34.17 51.57
CDX68324 Canola plasma membrane 51.25 50.51
CDX72778 Canola plasma membrane 51.67 50.51
CDX96304 Canola plasma membrane 51.25 50.31
CDY67968 Canola plasma membrane 50.62 50.21
CDY49220 Canola plasma membrane 50.83 50.1
TraesCS3D01G265400.1 Wheat plasma membrane 50.21 49.9
TraesCS3B01G298700.1 Wheat cytosol, plasma membrane, vacuole 50.21 49.9
TraesCS3D01G227600.2 Wheat plasma membrane 49.58 49.79
TraesCS3B01G255200.2 Wheat plasma membrane 49.58 49.79
TraesCS3A01G265100.1 Wheat plasma membrane 50.0 49.69
Zm00001d043838_P002 Maize plasma membrane 50.0 49.28
CDY27886 Canola plasma membrane 49.58 49.28
CDY50254 Canola plasma membrane 49.58 49.28
Zm00001d009494_P001 Maize plasma membrane 48.12 49.25
EES03448 Sorghum plasma membrane 49.58 48.67
CDX81843 Canola plasma membrane 48.12 48.53
CDY21736 Canola plasma membrane 47.92 48.32
Os05t0554000-01 Rice cytosol, peroxisome, plasma membrane 41.04 48.28
TraesCSU01G003900.1 Wheat cytosol, plasma membrane, vacuole 49.58 48.18
TraesCS1D01G388600.1 Wheat plasma membrane 49.17 47.97
TraesCS1B01G016700.1 Wheat plasma membrane 33.33 47.9
TraesCS1A01G380900.1 Wheat plasma membrane 49.17 47.87
Os01t0684900-01 Rice plasma membrane 48.96 47.86
CDX77471 Canola plasma membrane 39.17 47.59
CDY00530 Canola plasma membrane 47.92 47.52
OQU78400 Sorghum cytosol, plasma membrane, vacuole 49.38 47.4
CDX73002 Canola plasma membrane 39.38 47.25
CDY54775 Canola plasma membrane 48.12 47.24
HORVU1Hr1G084190.9 Barley mitochondrion, peroxisome, plasma membrane 48.75 47.18
CDY15087 Canola plasma membrane 46.25 46.64
CDY71754 Canola plasma membrane 25.62 46.59
TraesCS2D01G214300.1 Wheat plasma membrane 47.08 46.5
TraesCS2B01G229100.1 Wheat plasma membrane 46.88 46.3
CDX91652 Canola plasma membrane 46.88 46.3
CDX87974 Canola cytosol, peroxisome, plasma membrane 45.21 45.88
CDX84324 Canola plasma membrane 46.25 45.87
CDY27066 Canola plasma membrane 46.46 45.79
CDX79559 Canola plasma membrane 46.04 45.38
CDY60134 Canola plasma membrane 44.58 45.24
Os01t0504500-02 Rice plasma membrane 47.29 45.22
CDY72452 Canola cytosol, extracellular, mitochondrion 8.75 45.16
Zm00001d027921_P002 Maize plasma membrane 46.67 45.16
CDY36229 Canola plasma membrane 46.46 45.14
CDX96130 Canola plasma membrane 44.38 45.13
CDX86801 Canola plasma membrane 46.88 44.91
CDY68867 Canola plasma membrane 43.75 44.87
CDY12351 Canola cytosol, peroxisome, plasma membrane 45.0 44.81
CDY50255 Canola cytosol, peroxisome, vacuole 22.29 44.77
CDY36231 Canola plasma membrane 42.29 44.62
CDY13241 Canola plasma membrane 46.88 44.55
TraesCS2A01G202000.1 Wheat plasma membrane 47.5 44.53
CDX68215 Canola plasma membrane 31.88 44.22
CDY49289 Canola plasma membrane 45.21 44.2
HORVU2Hr1G039850.10 Barley peroxisome, plasma membrane, plastid 46.25 44.05
CDY17238 Canola plasma membrane 46.46 43.81
CDX72467 Canola plasma membrane 44.38 43.47
TraesCS1D01G009800.1 Wheat plasma membrane 45.21 43.31
CDX96129 Canola plasma membrane 46.46 43.05
EER95390 Sorghum plasma membrane 45.21 42.97
CDY36230 Canola plasma membrane 45.83 41.04
CDY65688 Canola plasma membrane 32.29 40.68
CDY09031 Canola plasma membrane 36.46 36.84
CDY17027 Canola plasma membrane 30.62 36.75
CDY18116 Canola plasma membrane 36.88 36.72
CDY18118 Canola plasma membrane 33.12 35.33
HORVU3Hr1G063430.3 Barley plastid 32.71 27.94
CDY18117 Canola cytosol, extracellular, plasma membrane 1.67 22.86
CDX84649 Canola vacuole 45.62 22.58
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078CX06EnsemblPlants:CDX81701ProteinID:CDX81701ProteinID:CDX81701.1GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238
GO:GO:0015297GO:GO:0016020GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00136626001InterPro:MATE_famPFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF87TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0004EEDD97SEG:seg
Description
BnaC08g39000D
Coordinates
chrLK031826:+:414038..418326
Molecular Weight (calculated)
52293.4 Da
IEP (calculated)
6.494
GRAVY (calculated)
0.704
Length
480 amino acids
Sequence
(BLAST)
001: MADAESNIND SLLLPVDRVE KEIWRDLPDG SYTEELKRII FFAAPMAAVV IAQFTLQIIS MVMVGHLGNL ALASASLASS FCNVTGFSFI IGLSTALDTL
101: SGQAYGAKLY RKLGLQTYTA MFCLTLVCFP LSIIWFNMEK LLVFLGQDHS IAHEAGRYAA WLIPGLFSYA VLQPLTRYFQ NQSMIRPLLI TSSFVFCLHV
201: PLCWLLVYKS GLGFLGGALA MGLSNWLYAI LLGSIMFFSS ACSETRAPLS MEIFNGVGEF FRYALPSAAM VCLEWWSYEL MILLSGLLPN PELETSVLSV
301: CLQTISTIYS IPLAIAAAAS TRISNELGAG NYRAAHIVVY AATSFAVMES VVVSLCLLLG RNVFGYVFSS DKATVDYVAK LAPLVSITII LDSLQGVLSA
401: GIARGCGWQH IGAYINLGSF YLWGIPFAAT LAFWVNLKGV GLWVGIQTGS LLQTFLLALV TGCTNWENQA LEARKRMALA
Best Arabidopsis Sequence Match ( AT1G15170.1 )
(BLAST)
001: MGDAESTKDR LLLPVERVEN VTWSDLRDGS FTVELKRLIF FAAPMAAVVI AQFMLQIVSM MMVGHLGNLS LASASLASSF CNVTGFSFII GLSCALDTLS
101: GQAYGAKLYR KLGVQTYTAM FCLALVCLPL SLIWFNMEKL LLILGQDPSI AHEAGKYATW LIPGLFAYAV LQPLTRYFQN QSLITPLLIT SYVVFCIHVP
201: LCWFLVYNSG LGNLGGALAI SLSNWLYAIF LGSFMYYSSA CSETRAPLSM EIFDGIGEFF KYALPSAAMI CLEWWSYELI ILLSGLLPNP QLETSVLSVC
301: LQTISTMYSI PLAIAAAAST RISNELGAGN SRAAHIVVYA AMSLAVIDAL IVSMSLLIGR NLFGHIFSSD KETIDYVAKM APLVSISLML DALQGVLSGI
401: ARGCGWQHIG AYINLGAFYL WGIPIAASLA FWIHLKGVGL WIGIQAGAVL QTLLLALVTG CTNWESQADK ARNRMALAYG T
Arabidopsis Description
DTX12Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178WNL0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.