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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane, vacuole
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY65688 Canola plasma membrane 83.25 87.4
Bra040861.1-P Field mustard plasma membrane 99.5 84.32
CDY09031 Canola plasma membrane 89.0 74.95
CDY18116 Canola plasma membrane 88.75 73.65
AT3G23560.1 Thale cress plasma membrane 85.5 71.7
AT3G23550.1 Thale cress plasma membrane 82.75 70.58
CDY18118 Canola plasma membrane 75.25 66.89
GSMUA_Achr2P13840_001 Banana plasma membrane 52.5 47.84
TraesCS2D01G142100.1 Wheat plasma membrane 49.75 45.64
Os07t0502200-01 Rice plasma membrane 54.25 45.02
TraesCS6A01G350400.1 Wheat plasma membrane 53.75 44.51
TraesCS6D01G332800.1 Wheat cytosol, plasma membrane, vacuole 53.5 44.12
TraesCS6B01G383300.1 Wheat plasma membrane 53.25 44.1
TraesCS2A01G139200.1 Wheat plasma membrane 53.0 43.98
TraesCS1A01G032900.1 Wheat plasma membrane 52.75 43.87
HORVU6Hr1G084080.3 Barley plasma membrane 53.25 43.83
Zm00001d021569_P001 Maize plasma membrane 52.75 43.69
TraesCS2B01G163300.3 Wheat cytosol, plasma membrane, vacuole 52.75 43.59
HORVU1Hr1G003490.2 Barley plasma membrane 52.0 43.51
HORVU0Hr1G039670.1 Barley plasma membrane 52.25 43.27
TraesCS2A01G261700.1 Wheat plasma membrane 53.0 43.18
TraesCS2B01G280500.1 Wheat plasma membrane 53.0 43.18
Os07t0108200-00 Rice cytosol, peroxisome, plasma membrane 52.25 43.0
TraesCS2D01G262300.1 Wheat plasma membrane 52.75 42.97
TraesCS1D01G034300.1 Wheat plasma membrane 51.25 42.62
HORVU2Hr1G063690.5 Barley cytosol, plasma membrane 53.0 40.85
GSMUA_Achr4P27830_001 Banana plasma membrane 56.0 40.14
Zm00001d018638_P001 Maize cytosol, peroxisome, plasma membrane 49.25 39.4
OQU88303 Sorghum cytosol, peroxisome, plasma membrane 49.25 38.93
HORVU0Hr1G002600.4 Barley golgi 34.75 38.08
CDX68215 Canola plasma membrane 31.25 36.13
EER99421 Sorghum plasma membrane 52.5 35.47
CDY68867 Canola plasma membrane 41.5 35.47
CDY00530 Canola plasma membrane 42.5 35.12
CDX91652 Canola plasma membrane 42.5 34.98
CDY27066 Canola plasma membrane 42.5 34.91
CDY60134 Canola plasma membrane 40.5 34.25
CDY54775 Canola plasma membrane 41.75 34.15
CDX84324 Canola plasma membrane 41.25 34.09
CDX79559 Canola plasma membrane 41.25 33.88
CDX72467 Canola plasma membrane 41.5 33.88
CDX73002 Canola plasma membrane 33.5 33.5
CDY49289 Canola plasma membrane 41.0 33.4
CDY17238 Canola plasma membrane 41.0 32.22
CDY36231 Canola plasma membrane 35.75 31.43
CDY52017 Canola plasma membrane 37.5 31.25
CDY50254 Canola plasma membrane 37.5 31.06
CDY27886 Canola plasma membrane 37.5 31.06
CDY71492 Canola plasma membrane 33.5 30.88
CDY15087 Canola plasma membrane 36.5 30.67
CDY39617 Canola plasma membrane 36.75 30.62
CDX81701 Canola plasma membrane 36.75 30.62
CDY21736 Canola plasma membrane 36.25 30.46
CDY36531 Canola plasma membrane 36.5 30.42
CDY71754 Canola plasma membrane 19.75 29.92
CDX81843 Canola plasma membrane 35.5 29.83
CDY72127 Canola plasma membrane 23.5 29.56
CDX83993 Canola plasma membrane 32.0 29.22
CDY72452 Canola cytosol, extracellular, mitochondrion 6.75 29.03
CDX87974 Canola cytosol, peroxisome, plasma membrane 34.25 28.96
CDX96130 Canola plasma membrane 33.75 28.6
CDY49220 Canola plasma membrane 34.75 28.54
CDY67968 Canola plasma membrane 34.5 28.51
CDX96304 Canola plasma membrane 34.75 28.43
CDY12351 Canola cytosol, peroxisome, plasma membrane 34.25 28.42
CDX77471 Canola plasma membrane 28.0 28.35
CDX68324 Canola plasma membrane 34.5 28.34
CDX72778 Canola plasma membrane 34.5 28.11
CDY50255 Canola cytosol, peroxisome, vacuole 16.75 28.03
CDX96129 Canola plasma membrane 36.0 27.8
CDY36229 Canola plasma membrane 34.25 27.73
CDX86801 Canola plasma membrane 34.5 27.54
CDY13241 Canola plasma membrane 34.25 27.13
CDY36230 Canola plasma membrane 36.25 27.05
CDY18117 Canola cytosol, extracellular, plasma membrane 2.25 25.71
CDX84649 Canola vacuole 41.25 17.01
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078FWE5UniProt:A0A078FWE5EnsemblPlants:CDY17027ProteinID:CDY17027ProteinID:CDY17027.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150
GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00094995001
InterPro:MATE_famPFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF78TMHMM:TMhelixUniParc:UPI0004EEB9A2
Description
BnaA08g03910DBnaA08g03910D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FWE5]
Coordinates
chrLK032069:-:324473..326705
Molecular Weight (calculated)
43482.3 Da
IEP (calculated)
7.213
GRAVY (calculated)
0.650
Length
400 amino acids
Sequence
(BLAST)
001: MADPIISSSP LLDDNVNDRG SISFSWVQKL IDVEESKAQI VYSLPMIFTN LFFYCIPLTS VMFASHLGQL ELAAATLANS WTTVTGFAFM VGLSGALETL
101: CGQGFGAKSY RMLGIHLQSS CIVSLVFTIF ISVLWFFTES VFGLIRQDPN ISKQAAIYMK YQAPGLGFIG APIATSISLW IAFLPLGTYV ICSDKFKDTW
201: TGFSLESIRY VVTNLTLSLP SAAMVCLEYW AFEILVVLAG LMPNPEIATS LVAICVNTEA ISYMLTYGLS AAASTRVSNE LGAGNVKGHD GWVGLFSNSP
301: LIKDEFASLR FFLAASITLD SIQGVLSGVA RGCGWQRVVT VVNLGTFYFI GMPIAAFCGF KLKLYAKGLW IGLICGLFSQ SSSLLLMTIF RKWTKLNSSV
Best Arabidopsis Sequence Match ( AT3G23560.1 )
(BLAST)
001: MADPATSSPL LDDHVGGEDE RGRRSRSSTL VQKVIDVEEA KAQMIYSLPM ILTNVFYYCI PITSVMFASH LGQLELAGAT LANSWATVSG FAFMVGLSGS
101: LETLCGQGFG AKRYRMLGVH LQSSCIVSLV FSILITIFWF FTESIFGLLR QDPSISKQAA LYMKYQAPGL LAYGFLQNIL RFCQTQSIIA PLVIFSFVPL
201: VINIATAYVL VYVAGLGFIG APIATSISLW IAFLSLGTYV MCSEKFKETW TGFSLESFRY IVINLTLSLP SAAMVCLEYW AFEILVFLAG VMPNPEINTS
301: LVAICVNTEA ISYMLTYGLS AAASTRVSNE LGAGNVKGAK KATSVSVKLS LVLALGVVIV LLVGHDGWVG LFSDSYVIKE EFASLRFFLA ASITLDSIQG
401: VLSGVARGCG WQRLVTVINL ATFYLIGMPI AAFCGFKLKF YAKGLWIGLI CGIFCQSSSL LLMTIFRKWT KLNVATV
Arabidopsis Description
DTX19Protein DETOXIFICATION 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.