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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 3
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, secretory
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G142100.1 Wheat plasma membrane 84.47 93.58
TraesCS2B01G163300.3 Wheat cytosol, plasma membrane, vacuole 91.93 91.74
TraesCS2A01G139200.1 Wheat plasma membrane 91.51 91.7
HORVU0Hr1G002600.4 Barley golgi 68.32 90.41
HORVU6Hr1G084080.3 Barley plasma membrane 88.61 88.07
HORVU1Hr1G003490.2 Barley plasma membrane 80.12 80.96
Os07t0502200-01 Rice plasma membrane 78.67 78.84
Zm00001d021569_P001 Maize plasma membrane 77.23 77.23
GSMUA_Achr2P13840_001 Banana plasma membrane 57.56 63.33
EER99421 Sorghum plasma membrane 75.57 61.66
VIT_19s0014g02440.t01 Wine grape plasma membrane 56.52 55.38
GSMUA_Achr4P27830_001 Banana plasma membrane 63.56 55.02
HORVU2Hr1G063690.5 Barley cytosol, plasma membrane 59.01 54.91
CDY65688 Canola plasma membrane 42.86 54.33
VIT_19s0014g02450.t01 Wine grape plasma membrane 54.24 53.8
PGSC0003DMT400054780 Potato plasma membrane 41.61 53.46
CDY17027 Canola plasma membrane 43.27 52.25
Solyc10g007100.2.1 Tomato plasma membrane 52.59 52.05
CDY09031 Canola plasma membrane 50.93 51.79
Solyc10g007360.2.1 Tomato plastid 51.55 51.66
PGSC0003DMT400049147 Potato plasma membrane 51.76 51.44
KRH22058 Soybean plasma membrane 53.62 51.39
CDY18116 Canola plasma membrane 51.14 51.24
AT3G23560.1 Thale cress plasma membrane 50.52 51.15
Bra040861.1-P Field mustard plasma membrane 49.48 50.64
AT3G23550.1 Thale cress plasma membrane 48.45 49.89
Bra023720.1-P Field mustard plasma membrane 49.69 49.69
KRH22061 Soybean cytosol, peroxisome, plasma membrane 51.35 49.6
CDY18118 Canola plasma membrane 46.17 49.56
KRH27266 Soybean plasma membrane 29.4 49.48
Solyc10g007380.1.1 Tomato plastid 48.65 45.9
PGSC0003DMT400064458 Potato plasma membrane 38.51 45.37
PGSC0003DMT400054764 Potato plasma membrane 48.24 44.21
KRH22064 Soybean plasma membrane 48.86 44.03
Solyc10g007370.1.1 Tomato plasma membrane, plastid 48.45 42.78
PGSC0003DMT400014996 Potato plasma membrane 37.89 41.78
Bra023719.1-P Field mustard plasma membrane 45.76 41.39
HORVU3Hr1G005230.2 Barley endoplasmic reticulum, plasma membrane 31.88 37.2
HORVU0Hr1G022350.4 Barley plasma membrane 36.65 36.88
HORVU2Hr1G068140.14 Barley endoplasmic reticulum, golgi, mitochondrion, peroxisome 38.72 36.74
HORVU7Hr1G121100.1 Barley plasma membrane 35.61 36.6
HORVU2Hr1G039850.10 Barley peroxisome, plasma membrane, plastid 37.89 36.31
HORVU7Hr1G047080.17 Barley plasma membrane 38.1 36.22
HORVU7Hr1G112340.13 Barley cytosol, plasma membrane 36.65 35.19
HORVU1Hr1G084190.9 Barley mitochondrion, peroxisome, plasma membrane 35.61 34.68
HORVU2Hr1G068090.13 Barley plastid 37.68 32.27
HORVU7Hr1G047070.3 Barley mitochondrion 36.65 32.24
HORVU7Hr1G108070.4 Barley golgi, mitochondrion, plasma membrane 21.33 31.6
HORVU7Hr1G095900.1 Barley plastid 34.78 31.4
HORVU5Hr1G091820.13 Barley peroxisome 31.88 31.24
CDY18117 Canola cytosol, extracellular, plasma membrane 1.86 25.71
HORVU3Hr1G063430.3 Barley plastid 27.12 23.31
Protein Annotations
EnsemblPlants:HORVU0Hr1G039670.1EnsemblPlantsGene:HORVU0Hr1G039670GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085InterPro:MATE_famPANTHER:PTHR11206PANTHER:PTHR11206:SF199PFAM:PF01554SEG:seg
TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI000B487FA4UniProt:A0A287EDF3MapMan:24.2.4.1.1:
Description
Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A287EDF3]
Coordinates
chrchrUn:-:249023219..249041005
Molecular Weight (calculated)
52095.5 Da
IEP (calculated)
7.350
GRAVY (calculated)
0.749
Length
483 amino acids
Sequence
(BLAST)
001: MSSTPLLGTT CEPADGKDGE ARPCSPAWSG RLIDTEEAWM QLQFAVPMVL TNMSYYSIPL VSVMFSGHLG NVHLAGATLG NSWATVTGYA FVTGMSGALE
101: TLCGQAYGAQ LYRMLGLYLQ SSVIMSAAVS VVIAVLWLFT EPLLLCLHQE PEVSRAAAVF IRYQIPGLFA FSFLQCLLRY LQTQSVVMPL VVCSVVPFGL
201: HVPLNHLLVN VLGFGLTGAS AAISITFWFS CLMLLGYVMW SKKLSETWKG FSADAFKYVL PTIKLAAPSA IMVCLEYWAF ELLVLIAGLL PNSTVSTSLI
301: AMCSSTEAIA YMITYGFSAA VSTRVSNEIG AGNVDMAKNA VAVTLKLSVF LAFSFILLLG IGHGLWARLF TGSEVIAAEF AAITPLMMIS IVLDSAQGVL
401: SGVARGCGWQ HLAALTNLVA FYFIGMPLAI LFAFKLNFYT KGLWSGLICG LTCQTSTLVV ITARTKWSKI VDAMRQEKDN YVA
Best Arabidopsis Sequence Match ( AT1G66760.1 )
(BLAST)
001: MKKSIETPLL LNTKQSQDED KEKIRWEKMK KVASMAAPMV AVNMSQYLLQ ATSTMIVGHR SELALAGIAL GSSFANVTGF GVLFGLSGSL ETLCGQAYGA
101: KQYHKLGSYT FTSIVFLLII SVPISILWMF MNQILLLLHQ DPQIAELAGV YCLWLVPALF GYSVLESLVR YFQSQSLIYP MVLSSLAALS FHVPLCWLMV
201: HKFDFGAKGA AASIGISYWL NAVFLWVYMK RSSRCVETRI YMSKDVFVHT NIFFQFAIPS AMMCCLEWLA FEVITLLSGL LPNSKLETSV ISICLTTSSL
301: HYNLVNGIGD AASTNVANEL GAGNPRGARD SAAAAIIIAA VESVIVSSSL FLSRSVWPYA YSNVEEVISY VTDITPILCI SILMDSFLTV LSGIVRGTGW
401: QKIGAYVNIT SYYVIGIPVG LLLCFHLHFN GKGLWAGLVT GSTLQTLILF LVIGFTNWSK EVIVTA
Arabidopsis Description
DTX9Protein DETOXIFICATION 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9M8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.