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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 5
  • extracellular 1
  • golgi 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY17027 Canola plasma membrane 84.32 99.5
AT3G23560.1 Thale cress plasma membrane 85.38 84.49
AT3G23550.1 Thale cress plasma membrane 82.84 83.37
Bra023720.1-P Field mustard plasma membrane 82.63 80.75
Bra023719.1-P Field mustard plasma membrane 77.97 68.91
GSMUA_Achr2P13840_001 Banana plasma membrane 51.27 55.13
TraesCS2D01G142100.1 Wheat plasma membrane 48.73 52.75
TraesCS1A01G032900.1 Wheat plasma membrane 52.54 51.56
Os07t0502200-01 Rice plasma membrane 52.54 51.45
TraesCS6A01G350400.1 Wheat plasma membrane 52.12 50.93
HORVU1Hr1G003490.2 Barley plasma membrane 51.48 50.84
TraesCS6B01G383300.1 Wheat plasma membrane 51.69 50.52
TraesCS2A01G139200.1 Wheat plasma membrane 51.48 50.41
TraesCS2B01G163300.3 Wheat cytosol, plasma membrane, vacuole 51.69 50.41
TraesCS6D01G332800.1 Wheat cytosol, plasma membrane, vacuole 51.69 50.31
Os07t0108200-00 Rice cytosol, peroxisome, plasma membrane 51.69 50.21
TraesCS2A01G261700.1 Wheat plasma membrane 52.12 50.1
TraesCS2B01G280500.1 Wheat plasma membrane 52.12 50.1
TraesCS2D01G262300.1 Wheat plasma membrane 51.91 49.9
TraesCS1D01G034300.1 Wheat plasma membrane 50.85 49.9
HORVU6Hr1G084080.3 Barley plasma membrane 51.27 49.79
Zm00001d021569_P001 Maize plasma membrane 50.85 49.69
HORVU0Hr1G039670.1 Barley plasma membrane 50.64 49.48
HORVU2Hr1G063690.5 Barley cytosol, plasma membrane 52.12 47.4
GSMUA_Achr4P27830_001 Banana plasma membrane 55.08 46.59
HORVU0Hr1G002600.4 Barley golgi 36.02 46.58
Zm00001d018638_P001 Maize cytosol, peroxisome, plasma membrane 48.94 46.2
OQU88303 Sorghum cytosol, peroxisome, plasma membrane 49.15 45.85
EER99421 Sorghum plasma membrane 51.06 40.71
Bra022594.1-P Field mustard plasma membrane 41.31 40.04
Bra028310.1-P Field mustard plasma membrane 40.47 39.87
Bra005432.1-P Field mustard plasma membrane 39.62 39.7
Bra028309.1-P Field mustard plasma membrane 40.47 39.46
Bra015973.1-P Field mustard plasma membrane 39.19 39.11
Bra017640.1-P Field mustard plasma membrane 39.83 38.29
Bra015133.1-P Field mustard plasma membrane 37.08 36.23
Bra004188.1-P Field mustard plasma membrane 35.17 35.85
Bra016671.1-P Field mustard plasma membrane 36.44 35.68
Bra003832.1-P Field mustard plasma membrane 39.62 35.55
Bra026160.1-P Field mustard plasma membrane 35.59 35.07
Bra026778.1-P Field mustard plasma membrane 34.96 34.3
Bra013214.1-P Field mustard plasma membrane 34.53 34.24
Bra030999.1-P Field mustard plasma membrane 29.87 32.94
Bra016158.1-P Field mustard plasma membrane 34.11 32.86
Bra007964.1-P Field mustard cytosol, golgi, plasma membrane 34.32 32.79
Bra015208.1-P Field mustard cytosol, peroxisome, plasma membrane 33.47 32.78
Bra003935.1-P Field mustard plasma membrane 31.99 32.75
Bra035241.1-P Field mustard plasma membrane 34.11 32.2
Bra014999.1-P Field mustard plasma membrane 29.45 24.56
Bra015131.1-P Field mustard cytosol 33.9 21.02
Bra022974.1-P Field mustard vacuole 39.19 20.22
Bra004187.1-P Field mustard plasma membrane 34.11 18.25
Protein Annotations
MapMan:24.2.4.1.1EnsemblPlantsGene:Bra040861EnsemblPlants:Bra040861.1EnsemblPlants:Bra040861.1-PGO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297
GO:GO:0016020GO:GO:0016021GO:GO:0055085UniProt:M4FID2InterPro:MATE_famPFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF78TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI000253E9CC:
Description
AT3G23560 (E=4e-232) ALF5 | ALF5 (ABERRANT LATERAL ROOT FORMATION 5); antiporter/ drug transporter/ transporter
Coordinates
chrScaffold000283:-:7362..9563
Molecular Weight (calculated)
51217.2 Da
IEP (calculated)
8.233
GRAVY (calculated)
0.761
Length
472 amino acids
Sequence
(BLAST)
001: MADPIISSSP LLDDNVNDRG SISFSWVQKL IDVEESKAQI VYSLPMIFTN LFFYCIPLTS VMFASHLGQL ELAAATLANS WTTVTGFAFM VGLSGALETL
101: CGQGFGAKSY RMLGIHLQSS CIVSLVFTIF ISILWFFTES VFGLIRQDPN ISKQAAIYMK YQAPGLLAYG FLQNILRFCQ TQSIVTPLVV FSFVPLVINI
201: GISYVLVYLT SLGFIGAPIA TSISLWIAFL SLGTYVICSD KFKDTWTGFS LESIRYVVTN LTLSLPSAAM VCLEYWAFEI LVVLAGLMPN PEIATSLVAI
301: CVNTEAISYM LTYGLSAAAS TRVSNELGAG NVKGAKKATS VSTKLSLVLA LGVVVTLFVG HDGWVGLFSN SPLIKDEFAS LRFFLAASIT LDSIQGVLSG
401: VARGCGWQRV VTVVNLGTFY FIGMPIAAFC GFKLKLYAKG LWIGLICGLF SQSSSLLLMT IFRKWTKLNS SV
Best Arabidopsis Sequence Match ( AT3G23560.1 )
(BLAST)
001: MADPATSSPL LDDHVGGEDE RGRRSRSSTL VQKVIDVEEA KAQMIYSLPM ILTNVFYYCI PITSVMFASH LGQLELAGAT LANSWATVSG FAFMVGLSGS
101: LETLCGQGFG AKRYRMLGVH LQSSCIVSLV FSILITIFWF FTESIFGLLR QDPSISKQAA LYMKYQAPGL LAYGFLQNIL RFCQTQSIIA PLVIFSFVPL
201: VINIATAYVL VYVAGLGFIG APIATSISLW IAFLSLGTYV MCSEKFKETW TGFSLESFRY IVINLTLSLP SAAMVCLEYW AFEILVFLAG VMPNPEINTS
301: LVAICVNTEA ISYMLTYGLS AAASTRVSNE LGAGNVKGAK KATSVSVKLS LVLALGVVIV LLVGHDGWVG LFSDSYVIKE EFASLRFFLA ASITLDSIQG
401: VLSGVARGCG WQRLVTVINL ATFYLIGMPI AAFCGFKLKF YAKGLWIGLI CGIFCQSSSL LLMTIFRKWT KLNVATV
Arabidopsis Description
DTX19Protein DETOXIFICATION 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.