Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 3
- golgi 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS1D01G034300.1 | Wheat | plasma membrane | 93.14 | 93.14 |
| HORVU1Hr1G003490.2 | Barley | plasma membrane | 90.64 | 91.21 |
| TraesCS6A01G350400.1 | Wheat | plasma membrane | 80.04 | 79.71 |
| TraesCS2A01G139200.1 | Wheat | plasma membrane | 79.0 | 78.84 |
| Os07t0502200-01 | Rice | plasma membrane | 72.56 | 72.41 |
| Zm00001d021569_P001 | Maize | plasma membrane | 71.93 | 71.64 |
| GSMUA_Achr2P13840_001 | Banana | plasma membrane | 54.47 | 59.68 |
| EER99421 | Sorghum | plasma membrane | 71.31 | 57.94 |
| TraesCS2A01G261700.1 | Wheat | plasma membrane | 57.38 | 56.21 |
| VIT_19s0014g02440.t01 | Wine grape | plasma membrane | 56.96 | 55.58 |
| CDY65688 | Canola | plasma membrane | 43.66 | 55.12 |
| PGSC0003DMT400054780 | Potato | plasma membrane | 43.04 | 55.05 |
| VIT_19s0014g02450.t01 | Wine grape | plasma membrane | 54.68 | 54.0 |
| GSMUA_Achr4P27830_001 | Banana | plasma membrane | 61.95 | 53.41 |
| AT3G23560.1 | Thale cress | plasma membrane | 52.81 | 53.25 |
| Solyc10g007360.2.1 | Tomato | plastid | 53.22 | 53.11 |
| CDY18116 | Canola | plasma membrane | 53.22 | 53.11 |
| Solyc10g007100.2.1 | Tomato | plasma membrane | 53.85 | 53.07 |
| CDY09031 | Canola | plasma membrane | 52.39 | 53.05 |
| CDY17027 | Canola | plasma membrane | 43.87 | 52.75 |
| PGSC0003DMT400049147 | Potato | plasma membrane | 53.22 | 52.67 |
| Bra040861.1-P | Field mustard | plasma membrane | 51.56 | 52.54 |
| AT3G23550.1 | Thale cress | plasma membrane | 50.73 | 52.03 |
| KRH22058 | Soybean | plasma membrane | 54.05 | 51.59 |
| Bra023720.1-P | Field mustard | plasma membrane | 51.14 | 50.93 |
| CDY18118 | Canola | plasma membrane | 47.4 | 50.67 |
| KRH27266 | Soybean | plasma membrane | 29.73 | 49.83 |
| KRH22061 | Soybean | cytosol, peroxisome, plasma membrane | 51.14 | 49.2 |
| PGSC0003DMT400064458 | Potato | plasma membrane | 38.88 | 45.61 |
| Solyc10g007380.1.1 | Tomato | plastid | 47.82 | 44.92 |
| KRH22064 | Soybean | plasma membrane | 48.86 | 43.84 |
| PGSC0003DMT400054764 | Potato | plasma membrane | 48.02 | 43.83 |
| Bra023719.1-P | Field mustard | plasma membrane | 48.02 | 43.26 |
| PGSC0003DMT400014996 | Potato | plasma membrane | 39.29 | 43.15 |
| Solyc10g007370.1.1 | Tomato | plasma membrane, plastid | 48.23 | 42.41 |
| TraesCS7A01G494300.1 | Wheat | plasma membrane | 39.71 | 40.21 |
| TraesCS7A01G230500.1 | Wheat | plasma membrane | 40.12 | 39.96 |
| TraesCS5A01G368700.1 | Wheat | plasma membrane | 39.92 | 39.83 |
| TraesCS2A01G278400.1 | Wheat | plasma membrane | 39.71 | 39.79 |
| TraesCS2A01G278500.1 | Wheat | plasma membrane | 38.88 | 39.62 |
| TraesCS3A01G229400.1 | Wheat | plasma membrane | 32.85 | 39.6 |
| TraesCS7A01G500700.1 | Wheat | plasma membrane | 38.88 | 39.37 |
| TraesCS7A01G230200.1 | Wheat | cytosol, nucleus, plasma membrane | 39.29 | 39.05 |
| TraesCS5A01G368500.1 | Wheat | plasma membrane | 39.09 | 39.0 |
| TraesCS7A01G497300.1 | Wheat | endoplasmic reticulum, nucleus, plasma membrane | 38.25 | 38.98 |
| TraesCS7A01G033200.1 | Wheat | plasma membrane | 38.25 | 38.74 |
| TraesCS7A01G554500.1 | Wheat | plasma membrane | 37.63 | 38.51 |
| TraesCS3A01G029100.1 | Wheat | plasma membrane | 37.84 | 38.48 |
| TraesCS5A01G368600.2 | Wheat | plasma membrane | 39.29 | 38.1 |
| TraesCS3A01G265100.1 | Wheat | plasma membrane | 38.25 | 38.1 |
| TraesCS7A01G230100.1 | Wheat | cytosol, nucleus, peroxisome | 38.25 | 38.1 |
| TraesCS5A01G368800.1 | Wheat | mitochondrion | 37.01 | 38.03 |
| TraesCS3A01G055900.1 | Wheat | plasma membrane | 37.84 | 37.76 |
| TraesCS7A01G411800.1 | Wheat | plasma membrane | 37.63 | 37.32 |
| TraesCS1A01G380900.1 | Wheat | plasma membrane | 37.63 | 36.71 |
| TraesCS2A01G202000.1 | Wheat | plasma membrane | 38.88 | 36.52 |
| TraesCS7A01G473200.1 | Wheat | plasma membrane | 35.14 | 35.65 |
| CDY18117 | Canola | cytosol, extracellular, plasma membrane | 2.08 | 28.57 |
Protein Annotations
| EnsemblPlants:TraesCS1A01G032900.1 | EnsemblPlantsGene:TraesCS1A01G032900 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006855 | GO:GO:0008150 | GO:GO:0015238 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0055085 |
| InterPro:MATE_fam | PANTHER:PTHR11206 | PANTHER:PTHR11206:SF199 | PFAM:PF01554 | SEG:seg | TIGR:cd13132 |
| TIGRFAMs:TIGR00797 | TMHMM:TMhelix | MapMan:24.2.4.1.1 | : | : | : |
Description
No Description!
Coordinates
chr1A:-:15344008..15348422
Molecular Weight (calculated)
52131.8 Da
IEP (calculated)
7.714
GRAVY (calculated)
0.798
Length
481 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSAPLLGAG EPFGECREAK RPSPAWLRRL IDTEEAWAQL QFALPMVLTN MSYYAIPLVS VMFSGHLGNV HLAGATLGNS WATVTGYAFV TGMSGAMETL
101: CGQAYGARMY RLLGLYLQSS LIMSTVVSVL ISVVWLFTEP ILLFLHQEPE VSHAAAVFIR YQVPGLFAYS FLQCLLRYLQ TQSIVVPLVV CSMVPFVLHI
201: AVNYLLVNVV GLGLTGASLA ISATFWVSCL MLLAYVMWSK EFDETWKGFS TDAFNYVLPT IKLAMPSAIM VCLEYWAIEL LVLIAGLLPN STASTSLIAI
301: CASTQAISYM ITYGFSAAVS TRVSNEIGAG NVDRAKNAVM VTMKLSVFLA LSFILLLIVG HDLWASLFTE STVIVAKFAG ITPLLTISIV LDSAQGVLSG
401: VARGCGWQHL AATTNLVAFY LAGMPVAILL AFKLNLYTHG LWLGLITGLA CQTSVMVLIT LRTKWSKLVD AMVKNRDGYV A
101: CGQAYGARMY RLLGLYLQSS LIMSTVVSVL ISVVWLFTEP ILLFLHQEPE VSHAAAVFIR YQVPGLFAYS FLQCLLRYLQ TQSIVVPLVV CSMVPFVLHI
201: AVNYLLVNVV GLGLTGASLA ISATFWVSCL MLLAYVMWSK EFDETWKGFS TDAFNYVLPT IKLAMPSAIM VCLEYWAIEL LVLIAGLLPN STASTSLIAI
301: CASTQAISYM ITYGFSAAVS TRVSNEIGAG NVDRAKNAVM VTMKLSVFLA LSFILLLIVG HDLWASLFTE STVIVAKFAG ITPLLTISIV LDSAQGVLSG
401: VARGCGWQHL AATTNLVAFY LAGMPVAILL AFKLNLYTHG LWLGLITGLA CQTSVMVLIT LRTKWSKLVD AMVKNRDGYV A
001: MADPATSSPL LDDHVGGEDE RGRRSRSSTL VQKVIDVEEA KAQMIYSLPM ILTNVFYYCI PITSVMFASH LGQLELAGAT LANSWATVSG FAFMVGLSGS
101: LETLCGQGFG AKRYRMLGVH LQSSCIVSLV FSILITIFWF FTESIFGLLR QDPSISKQAA LYMKYQAPGL LAYGFLQNIL RFCQTQSIIA PLVIFSFVPL
201: VINIATAYVL VYVAGLGFIG APIATSISLW IAFLSLGTYV MCSEKFKETW TGFSLESFRY IVINLTLSLP SAAMVCLEYW AFEILVFLAG VMPNPEINTS
301: LVAICVNTEA ISYMLTYGLS AAASTRVSNE LGAGNVKGAK KATSVSVKLS LVLALGVVIV LLVGHDGWVG LFSDSYVIKE EFASLRFFLA ASITLDSIQG
401: VLSGVARGCG WQRLVTVINL ATFYLIGMPI AAFCGFKLKF YAKGLWIGLI CGIFCQSSSL LLMTIFRKWT KLNVATV
101: LETLCGQGFG AKRYRMLGVH LQSSCIVSLV FSILITIFWF FTESIFGLLR QDPSISKQAA LYMKYQAPGL LAYGFLQNIL RFCQTQSIIA PLVIFSFVPL
201: VINIATAYVL VYVAGLGFIG APIATSISLW IAFLSLGTYV MCSEKFKETW TGFSLESFRY IVINLTLSLP SAAMVCLEYW AFEILVFLAG VMPNPEINTS
301: LVAICVNTEA ISYMLTYGLS AAASTRVSNE LGAGNVKGAK KATSVSVKLS LVLALGVVIV LLVGHDGWVG LFSDSYVIKE EFASLRFFLA ASITLDSIQG
401: VLSGVARGCG WQRLVTVINL ATFYLIGMPI AAFCGFKLKF YAKGLWIGLI CGIFCQSSSL LLMTIFRKWT KLNVATV
Arabidopsis Description
DTX19Protein DETOXIFICATION 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH2]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.