Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- nucleus 1
- plasma membrane 5
- plastid 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- golgi 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| Solyc10g007100.2.1 | Tomato | plasma membrane | 94.24 | 93.85 |
| PGSC0003DMT400054780 | Potato | plasma membrane | 61.32 | 79.26 |
| PGSC0003DMT400064458 | Potato | plasma membrane | 63.17 | 74.88 |
| VIT_19s0014g02450.t01 | Wine grape | plasma membrane | 64.4 | 64.27 |
| PGSC0003DMT400054764 | Potato | plasma membrane | 68.11 | 62.81 |
| VIT_19s0014g02440.t01 | Wine grape | plasma membrane | 62.14 | 61.26 |
| PGSC0003DMT400014996 | Potato | plasma membrane | 54.53 | 60.5 |
| AT3G23560.1 | Thale cress | plasma membrane | 57.2 | 58.28 |
| AT3G23550.1 | Thale cress | plasma membrane | 56.17 | 58.21 |
| GSMUA_Achr2P13840_001 | Banana | plasma membrane | 52.26 | 57.86 |
| KRH22058 | Soybean | plasma membrane | 59.47 | 57.34 |
| KRH27266 | Soybean | plasma membrane | 33.54 | 56.79 |
| KRH22061 | Soybean | cytosol, peroxisome, plasma membrane | 57.2 | 55.6 |
| TraesCS2D01G142100.1 | Wheat | plasma membrane | 48.97 | 54.59 |
| TraesCS1A01G032900.1 | Wheat | plasma membrane | 52.67 | 53.22 |
| HORVU1Hr1G003490.2 | Barley | plasma membrane | 52.06 | 52.93 |
| TraesCS6A01G350400.1 | Wheat | plasma membrane | 52.26 | 52.59 |
| TraesCS2B01G163300.3 | Wheat | cytosol, plasma membrane, vacuole | 52.26 | 52.48 |
| TraesCS6B01G383300.1 | Wheat | plasma membrane | 51.85 | 52.17 |
| TraesCS2A01G261700.1 | Wheat | plasma membrane | 52.67 | 52.14 |
| TraesCS1D01G034300.1 | Wheat | plasma membrane | 51.44 | 51.98 |
| TraesCS6D01G332800.1 | Wheat | cytosol, plasma membrane, vacuole | 51.85 | 51.96 |
| TraesCS2D01G262300.1 | Wheat | plasma membrane | 52.47 | 51.93 |
| TraesCS2A01G139200.1 | Wheat | plasma membrane | 51.44 | 51.87 |
| HORVU0Hr1G039670.1 | Barley | plasma membrane | 51.44 | 51.76 |
| TraesCS2B01G280500.1 | Wheat | plasma membrane | 52.26 | 51.73 |
| Os07t0108200-00 | Rice | cytosol, peroxisome, plasma membrane | 51.44 | 51.44 |
| HORVU6Hr1G084080.3 | Barley | plasma membrane | 51.23 | 51.23 |
| Os07t0502200-01 | Rice | plasma membrane | 50.62 | 51.04 |
| Zm00001d021569_P001 | Maize | plasma membrane | 50.41 | 50.72 |
| GSMUA_Achr4P27830_001 | Banana | plasma membrane | 58.23 | 50.72 |
| HORVU0Hr1G002600.4 | Barley | golgi | 37.86 | 50.41 |
| KRH22064 | Soybean | plasma membrane | 54.73 | 49.63 |
| HORVU2Hr1G063690.5 | Barley | cytosol, plasma membrane | 52.67 | 49.33 |
| Zm00001d018638_P001 | Maize | cytosol, peroxisome, plasma membrane | 47.94 | 46.6 |
| Bra023719.1-P | Field mustard | plasma membrane | 50.82 | 46.25 |
| OQU88303 | Sorghum | cytosol, peroxisome, plasma membrane | 48.15 | 46.25 |
| EER99421 | Sorghum | plasma membrane | 50.62 | 41.55 |
| PGSC0003DMT400014431 | Potato | plasma membrane | 41.15 | 40.4 |
| PGSC0003DMT400046664 | Potato | plasma membrane | 39.09 | 40.08 |
| PGSC0003DMT400078374 | Potato | plasma membrane | 33.74 | 38.41 |
| PGSC0003DMT400043016 | Potato | cytosol, plasma membrane, vacuole | 36.83 | 38.17 |
| PGSC0003DMT400026959 | Potato | cytosol, plasma membrane, vacuole | 37.65 | 38.12 |
| PGSC0003DMT400078840 | Potato | golgi, plasma membrane, vacuole | 36.42 | 37.9 |
| PGSC0003DMT400078371 | Potato | plasma membrane | 35.39 | 37.89 |
| PGSC0003DMT400078716 | Potato | extracellular, plasma membrane, vacuole | 33.13 | 37.44 |
| PGSC0003DMT400015301 | Potato | plasma membrane | 37.04 | 37.27 |
| PGSC0003DMT400065417 | Potato | plasma membrane | 36.42 | 37.11 |
| PGSC0003DMT400046666 | Potato | plasma membrane | 36.83 | 36.61 |
| PGSC0003DMT400078715 | Potato | plasma membrane | 35.39 | 36.29 |
| PGSC0003DMT400046656 | Potato | plasma membrane | 34.77 | 36.27 |
| PGSC0003DMT400048259 | Potato | plasma membrane | 35.19 | 35.85 |
| PGSC0003DMT400070690 | Potato | endoplasmic reticulum, plasma membrane, vacuole | 33.13 | 35.23 |
| PGSC0003DMT400070650 | Potato | plasma membrane | 24.28 | 35.12 |
| CDY18117 | Canola | cytosol, extracellular, plasma membrane | 1.85 | 25.71 |
Protein Annotations
| MapMan:24.2.4.1.1 | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 | GO:GO:0006855 |
| GO:GO:0008150 | GO:GO:0015238 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0016021 | GO:GO:0055085 |
| UniProt:M1BNB7 | InterPro:MATE_fam | PFAM:PF01554 | EnsemblPlantsGene:PGSC0003DMG400019100 | PGSC:PGSC0003DMG400019100 | EnsemblPlants:PGSC0003DMT400049147 |
| PANTHER:PTHR11206 | PANTHER:PTHR11206:SF78 | TIGRFAMs:TIGR00797 | TMHMM:TMhelix | UniParc:UPI000295645A | SEG:seg |
Description
TRANSPARENT TESTA 12 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400019100]
Coordinates
chr00:+:34200682..34204003
Molecular Weight (calculated)
53187.1 Da
IEP (calculated)
6.424
GRAVY (calculated)
0.765
Length
486 amino acids
Sequence
(BLAST)
(BLAST)
001: MDDSSISNSL KSPMLPPTSL ETNKWWIIII NKLIDVEEAK NQILFSFPMI VVTSCFYFIN LVSVMFAGHL GQLELAASNL ANSWAMVSGL AFMIGLSGAL
101: ETLCGQGYGA KMYRMLGIHL QTSCIISFLF SIIIAIIWWN SDTILILLHQ DPDIAKKAGE FLKLLIPGLF AYGFLQNVLR FVQAQSIVLP LVVCSVGCLV
201: IHIGIAYGLV HWTSLGFNGA PLAASISIWI SVLTLGVYVL FSERFSHIWR DGFSFEPFHY VLMNLKLALP SAAMVCLEYW AFELLVLLAG IMPNSETTTS
301: LIAMSVNTEA IAYTISYGLS AAASTRVANE LGGGNIDKAK HAMGVTLKLS VLLALIVDLV LCFGHDVWAG LFSDSTEIIN KFATMTPLLL ISFLFDFFQG
401: VLSGVARGCG WQHLAMCINL ATFYFIGMPI AGLLAFKFNL HAQGLWMGLI CGLACQGLGL LLLTLFIKWE KVEASTKSNS ENERLP
101: ETLCGQGYGA KMYRMLGIHL QTSCIISFLF SIIIAIIWWN SDTILILLHQ DPDIAKKAGE FLKLLIPGLF AYGFLQNVLR FVQAQSIVLP LVVCSVGCLV
201: IHIGIAYGLV HWTSLGFNGA PLAASISIWI SVLTLGVYVL FSERFSHIWR DGFSFEPFHY VLMNLKLALP SAAMVCLEYW AFELLVLLAG IMPNSETTTS
301: LIAMSVNTEA IAYTISYGLS AAASTRVANE LGGGNIDKAK HAMGVTLKLS VLLALIVDLV LCFGHDVWAG LFSDSTEIIN KFATMTPLLL ISFLFDFFQG
401: VLSGVARGCG WQHLAMCINL ATFYFIGMPI AGLLAFKFNL HAQGLWMGLI CGLACQGLGL LLLTLFIKWE KVEASTKSNS ENERLP
001: MADPATSSPL LDDHVGGEDE RGRRSRSSTL VQKVIDVEEA KAQMIYSLPM ILTNVFYYCI PITSVMFASH LGQLELAGAT LANSWATVSG FAFMVGLSGS
101: LETLCGQGFG AKRYRMLGVH LQSSCIVSLV FSILITIFWF FTESIFGLLR QDPSISKQAA LYMKYQAPGL LAYGFLQNIL RFCQTQSIIA PLVIFSFVPL
201: VINIATAYVL VYVAGLGFIG APIATSISLW IAFLSLGTYV MCSEKFKETW TGFSLESFRY IVINLTLSLP SAAMVCLEYW AFEILVFLAG VMPNPEINTS
301: LVAICVNTEA ISYMLTYGLS AAASTRVSNE LGAGNVKGAK KATSVSVKLS LVLALGVVIV LLVGHDGWVG LFSDSYVIKE EFASLRFFLA ASITLDSIQG
401: VLSGVARGCG WQRLVTVINL ATFYLIGMPI AAFCGFKLKF YAKGLWIGLI CGIFCQSSSL LLMTIFRKWT KLNVATV
101: LETLCGQGFG AKRYRMLGVH LQSSCIVSLV FSILITIFWF FTESIFGLLR QDPSISKQAA LYMKYQAPGL LAYGFLQNIL RFCQTQSIIA PLVIFSFVPL
201: VINIATAYVL VYVAGLGFIG APIATSISLW IAFLSLGTYV MCSEKFKETW TGFSLESFRY IVINLTLSLP SAAMVCLEYW AFEILVFLAG VMPNPEINTS
301: LVAICVNTEA ISYMLTYGLS AAASTRVSNE LGAGNVKGAK KATSVSVKLS LVLALGVVIV LLVGHDGWVG LFSDSYVIKE EFASLRFFLA ASITLDSIQG
401: VLSGVARGCG WQRLVTVINL ATFYLIGMPI AAFCGFKLKF YAKGLWIGLI CGIFCQSSSL LLMTIFRKWT KLNVATV
Arabidopsis Description
DTX19Protein DETOXIFICATION 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH2]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.