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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • plasma membrane 5
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plastid, secretory
BaCelLo:plastid
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Solyc03g112250.1.1 Tomato nucleus, peroxisome, plasma membrane 95.57 92.64
PGSC0003DMT400046666 Potato plasma membrane 91.77 88.96
PGSC0003DMT400046656 Potato plasma membrane 75.53 76.82
VIT_17s0000g09270.t01 Wine grape plasma membrane 63.29 66.96
TraesCS7B01G477900.1 Wheat plasma membrane 45.57 56.25
TraesCS2A01G278500.1 Wheat plasma membrane 55.49 55.72
GSMUA_Achr11P... Banana plasma membrane 56.96 55.33
KXG26020 Sorghum plasma membrane 55.91 55.21
PGSC0003DMT400070690 Potato endoplasmic reticulum, plasma membrane, vacuole 53.16 55.14
PGSC0003DMT400065417 Potato plasma membrane 55.49 55.14
TraesCS7A01G554500.1 Wheat plasma membrane 54.64 55.11
TraesCS2D01G277600.1 Wheat plasma membrane 55.91 54.98
TraesCS5A01G368700.1 Wheat plasma membrane 55.7 54.77
TraesCS5B01G370800.1 Wheat plasma membrane 30.8 54.68
HORVU7Hr1G121100.1 Barley plasma membrane 54.22 54.68
TraesCS7D01G541200.1 Wheat plasma membrane 54.22 54.68
TraesCS2A01G278400.1 Wheat plasma membrane 55.27 54.58
KXG19962 Sorghum plasma membrane 55.06 54.49
TraesCS2D01G277400.1 Wheat plasma membrane 55.06 54.38
KXG21780 Sorghum plasma membrane 51.48 54.22
TraesCS2B01G296000.1 Wheat plasma membrane 54.85 54.17
TraesCS5A01G368500.1 Wheat plasma membrane 55.06 54.15
TraesCS5D01G378200.1 Wheat plasma membrane 55.06 54.15
TraesCS5B01G371100.1 Wheat plasma membrane 55.7 53.88
Os06t0495500-01 Rice plasma membrane 54.43 53.86
TraesCS7A01G230500.1 Wheat plasma membrane 54.64 53.62
TraesCS2B01G296100.1 Wheat plasma membrane 55.06 53.59
Zm00001d000196_P001 Maize plasma membrane 53.59 53.59
TraesCS5D01G378100.1 Wheat plasma membrane 55.91 53.54
TraesCS5D01G378300.1 Wheat plasma membrane 54.43 53.53
Os06t0494400-01 Rice plasma membrane 55.27 53.47
TraesCS7B01G478700.1 Wheat plasma membrane 52.95 53.4
TraesCS7D01G541800.1 Wheat plasma membrane 52.95 53.4
TraesCS1D01G357500.1 Wheat plasma membrane 53.59 53.36
PGSC0003DMT400014431 Potato plasma membrane 55.7 53.33
Zm00001d004055_P001 Maize golgi, nucleus, plasma membrane 55.27 53.14
PGSC0003DMT400078840 Potato golgi, plasma membrane, vacuole 52.32 53.1
TraesCS3A01G029100.1 Wheat plasma membrane 52.95 53.07
PGSC0003DMT400048259 Potato plasma membrane 53.38 53.04
TraesCS7B01G479000.1 Wheat plasma membrane 52.53 52.98
TraesCS7D01G460200.2 Wheat plasma membrane 46.2 52.9
TraesCS5A01G368600.2 Wheat plasma membrane 55.27 52.82
TraesCS7D01G484500.1 Wheat plasma membrane 52.32 52.54
TraesCS7B01G196300.1 Wheat plasma membrane 54.01 52.46
TraesCS3D01G016400.1 Wheat endoplasmic reticulum, plasma membrane, vacuole 52.74 52.41
TraesCS1B01G369300.1 Wheat plasma membrane 52.95 52.4
EES06697 Sorghum plasma membrane 53.8 52.36
TraesCS7D01G230900.1 Wheat plasma membrane 54.01 52.35
TraesCS7B01G400500.1 Wheat plasma membrane 52.11 52.33
Zm00001d015964_P001 Maize cytosol, nucleus, plasma membrane 52.74 52.3
TraesCSU01G043800.1 Wheat plasma membrane 52.53 52.2
TraesCS7D01G230800.1 Wheat cytosol, nucleus, plasma membrane 53.16 52.07
HORVU2Hr1G068140.14 Barley endoplasmic reticulum, golgi, mitochondrion, peroxisome 55.7 51.87
Os04t0373400-01 Rice plasma membrane 52.74 51.76
TraesCS5D01G413800.1 Wheat plasma membrane 51.9 51.68
EES06698 Sorghum plasma membrane 52.32 51.67
TraesCS7A01G230200.1 Wheat cytosol, nucleus, plasma membrane 52.74 51.65
TraesCS7B01G196000.1 Wheat plasma membrane 44.51 51.59
OQU80064 Sorghum plasma membrane 32.28 51.52
TraesCS5A01G368800.1 Wheat mitochondrion 50.84 51.5
TraesCS5B01G408500.1 Wheat plasma membrane 51.27 51.48
HORVU3Hr1G005230.2 Barley endoplasmic reticulum, plasma membrane 44.94 51.45
TraesCS7B01G196100.1 Wheat cytosol, nucleus, plasma membrane 52.53 51.45
TraesCS7A01G230100.1 Wheat cytosol, nucleus, peroxisome 52.11 51.14
TraesCS7A01G497300.1 Wheat endoplasmic reticulum, nucleus, plasma membrane 50.84 51.06
TraesCS5B01G371200.2 Wheat plasma membrane 55.49 50.97
TraesCS7A01G494300.1 Wheat plasma membrane 50.84 50.74
Os10t0344900-01 Rice plasma membrane 51.05 50.73
HORVU0Hr1G022350.4 Barley plasma membrane 51.27 50.62
PGSC0003DMT400070650 Potato plasma membrane 35.87 50.6
HORVU7Hr1G047080.17 Barley plasma membrane 54.22 50.59
OQU77813 Sorghum plasma membrane 50.21 50.21
TraesCS3A01G055900.1 Wheat plasma membrane 51.05 50.21
TraesCS7D01G488000.1 Wheat plasma membrane 50.21 50.11
TraesCS7A01G500700.1 Wheat plasma membrane 50.0 49.89
Zm00001d000195_P001 Maize plasma membrane 49.79 49.89
TraesCS7A01G033200.1 Wheat plasma membrane 49.79 49.68
TraesCS7D01G481500.1 Wheat plasma membrane 49.79 49.68
TraesCS7B01G407800.1 Wheat plasma membrane 49.58 49.47
Os10t0345100-01 Rice plasma membrane 49.79 49.27
TraesCS3B01G027900.1 Wheat plasma membrane 52.95 49.12
PGSC0003DMT400078371 Potato plasma membrane 45.57 47.58
TraesCS7B01G374500.1 Wheat cytosol, peroxisome, plasma membrane 49.16 47.36
HORVU7Hr1G112340.13 Barley cytosol, plasma membrane 50.21 47.32
Zm00001d032971_P001 Maize cytosol, plasma membrane, vacuole 40.51 47.29
KXG30060 Sorghum plasma membrane 50.84 47.16
PGSC0003DMT400078715 Potato plasma membrane 47.05 47.05
Zm00001d015963_P001 Maize plasma membrane 49.58 46.72
HORVU7Hr1G108070.4 Barley golgi, mitochondrion, plasma membrane 32.07 46.63
PGSC0003DMT400078374 Potato plasma membrane 41.98 46.6
PGSC0003DMT400078716 Potato extracellular, plasma membrane, vacuole 42.19 46.51
PGSC0003DMT400043016 Potato cytosol, plasma membrane, vacuole 45.78 46.27
TraesCS7A01G473200.1 Wheat plasma membrane 45.99 45.99
Os10t0344500-00 Rice plasma membrane, vacuole 50.21 45.86
PGSC0003DMT400026959 Potato cytosol, plasma membrane, vacuole 46.41 45.83
HORVU2Hr1G068090.13 Barley plastid 54.43 45.74
PGSC0003DMT400015301 Potato plasma membrane 45.57 44.72
HORVU7Hr1G047070.3 Barley mitochondrion 50.84 43.9
TraesCS3D01G056000.1 Wheat cytosol, nucleus, peroxisome, plastid 52.74 43.55
HORVU5Hr1G091820.13 Barley peroxisome 42.83 41.18
PGSC0003DMT400054780 Potato plasma membrane 31.01 39.1
PGSC0003DMT400049147 Potato plasma membrane 40.08 39.09
TraesCS3B01G068700.1 Wheat cytosol, nucleus, peroxisome, plastid 45.78 37.09
PGSC0003DMT400014996 Potato plasma membrane 31.86 34.47
PGSC0003DMT400054764 Potato plasma membrane 37.76 33.97
PGSC0003DMT400064458 Potato plasma membrane 28.9 33.41
Zm00001d045948_P002 Maize nucleus, plasma membrane, vacuole 55.91 28.22
Protein Annotations
MapMan:24.2.4.1.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855
GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085
UniProt:M1BJF3InterPro:MATE_famPFAM:PF01554EnsemblPlantsGene:PGSC0003DMG400018119PGSC:PGSC0003DMG400018119EnsemblPlants:PGSC0003DMT400046664
PANTHER:PTHR11206PANTHER:PTHR11206:SF159TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0002963D50SEG:seg
Description
TRANSPARENT TESTA 12 protein [Source:PGSC_GENE;Acc:PGSC0003DMG400018119]
Coordinates
chr3:-:52060096..52062997
Molecular Weight (calculated)
51524.9 Da
IEP (calculated)
8.392
GRAVY (calculated)
0.626
Length
474 amino acids
Sequence
(BLAST)
001: MSERNSEFPL LSNNIEKGSW NPEDCDIGEV IEETKKQLEL AGPLVLVSFL QYFLQMISIM FVGRLGELSL SSATLATSFA GVTGFSFMLG TGSALETLCG
101: QAYGAKQYHM LGIHMQRGML VLLAISIPIS IIWAFAGHIF AFCGQDMEVS VHAGLYARWL IPSIFPYGLL QCQLRFLQTQ SRLKPLVIST CLTSLIHVLL
201: CWALVFRLGM GNKGAALCNA ISYWINVLIL ALYIRFASSC KETWTGFSKE GARNLVGFLS LAIPSALMVC LEQWAYEFLV FMSGLLPNPK LETSMMAISL
301: SISSLVFRIP FGFGSAVSTR VSNELGAGKP KAAKLAARVV LLLAVVEGLL LSGIAVAARN VWGYIYTNED EVVKYLSTIM PVLALSNFMD GIQGVLSGTA
401: RGCGWQKLGA QVNLGAYYLV GLPSAVILTF VFHLGGKGLW TGIISGSGFQ ALLLLLITLR TNWELQASSK FNLI
Best Arabidopsis Sequence Match ( AT5G52450.1 )
(BLAST)
001: MRDDRERGEG DLSWPLIGEK SSVKEEVKKQ LWLSGPLIAV SLLQFCLQVI SVMFVGHLGS LPLSAASIAT SFASVTGFSF LMGTASALDT LCGQAYGAKK
101: YGMLGIQMQR AMFVLTLASI PLSIIWANTE HLLVFFGQNK SIATLAGSYA KFMIPSIFAY GLLQCFNRFL QAQNNVFPVV FCSGVTTSLH VLLCWVLVFK
201: SGLGFQGAAL ANSISYWLNV VLLFCYVKFS PSCSLTWTGF SKEALRDILP FLRLAVPSAL MVCLEMWSFE LLVLLSGLLP NPVLETSVLS ICLNTSGTMW
301: MIPFGLSGAA STRISNELGA GNPKVAKLAV RVVICIAVAE SIVIGSVLIL IRNIWGLAYS SELEVVSYVA SMMPILALGN FLDSLQCVLS GVARGCGWQK
401: IGAIINLGSY YLVGVPSGLL LAFHFHVGGR GLWLGIICAL VVQVFGLGLV TIFTNWDEEA KKATNRIESS SSVKDFAVDD RSVVVF
Arabidopsis Description
DTX16Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178UMN3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.