Factsheet for PGSC0003DMT400048259

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
vacuole 2
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
EpiLoc:	vacuole
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g006740.2.1	Tomato	plasma membrane	93.71	94.9
PGSC0003DMT400070690	Potato	endoplasmic reticulum, plasma membrane, vacuole	71.49	74.62
PGSC0003DMT400065417	Potato	plasma membrane	74.42	74.42
VIT_11s0052g01540.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	55.77	66.67
VIT_11s0052g01570.t01	Wine grape	endoplasmic reticulum, plasma membrane, vacuole	59.96	64.85
PGSC0003DMT400070650	Potato	plasma membrane	45.49	64.58
PGSC0003DMT400078840	Potato	golgi, plasma membrane, vacuole	62.47	63.81
VIT_11s0052g01560.t01	Wine grape	vacuole	56.6	63.08
VIT_11s0052g01510.t01	Wine grape	golgi, peroxisome, plasma membrane	63.94	60.52
PGSC0003DMT400014431	Potato	plasma membrane	57.65	55.56
PGSC0003DMT400046664	Potato	plasma membrane	53.04	53.38
PGSC0003DMT400046666	Potato	plasma membrane	50.52	49.28
PGSC0003DMT400046656	Potato	plasma membrane	47.38	48.5
PGSC0003DMT400078374	Potato	plasma membrane	41.72	46.6
PGSC0003DMT400078371	Potato	plasma membrane	43.4	45.59
PGSC0003DMT400015301	Potato	plasma membrane	44.23	43.69
PGSC0003DMT400078716	Potato	extracellular, plasma membrane, vacuole	39.2	43.49
PGSC0003DMT400026959	Potato	cytosol, plasma membrane, vacuole	42.56	42.29
PGSC0003DMT400043016	Potato	cytosol, plasma membrane, vacuole	40.67	41.36
PGSC0003DMT400078715	Potato	plasma membrane	41.09	41.35
PGSC0003DMT400054780	Potato	plasma membrane	29.77	37.77
PGSC0003DMT400049147	Potato	plasma membrane	35.85	35.19
PGSC0003DMT400014996	Potato	plasma membrane	31.24	34.02
PGSC0003DMT400054764	Potato	plasma membrane	36.27	32.83
PGSC0003DMT400064458	Potato	plasma membrane	28.09	32.68

Protein Annotations

EnsemblPlants:PGSC0003DMT400048259	EnsemblPlantsGene:PGSC0003DMG400018749	GO:GO:0003674	GO:GO:0005215	GO:GO:0005575	GO:GO:0006810
GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297	GO:GO:0016020	GO:GO:0016021
GO:GO:0055085	InterPro:MATE_fam	PANTHER:PTHR11206	PANTHER:PTHR11206:SF196	PFAM:PF01554	PGSC:PGSC0003DMG400018749
TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI000294EB8D	UniProt:M1BM58	MapMan:24.2.4.1.1	:

Description

Conserved gene of unknown function [Source:PGSC_GENE;Acc:PGSC0003DMG400018749]

Coordinates

chr7:-:2462349..2464801

Molecular Weight (calculated)

52101.9 Da

IEP (calculated)

8.154

GRAVY (calculated)

0.659

Length

477 amino acids

Sequence
(BLAST)

001: MDIEERKEDL ECPNLGIERK YDEIFVQVKK LLVLAGPLML VNILLYSLQV ISVMFVGHQG ELALSGASMA TSFAFVTGFG LLMGMGSALE TLCGQSYGAN
101: QYHMLGIHMQ RAMFVNLLVS IPLACIWANA GRILVILRQD PEIAAEAGIY ARFMIPSIFA YGLLECQIRF LQAQNNVVPM MLTAGGTALL HVFGCWILVL
201: KSGLGSRGAA LANATSYWIN VFSLVAYIKI SPSFKSTWTG FSTEAFSDIP RYLRLAIPSA LMICLEIWSF EMMVLLSGLL PNPKLETSVL SISLNTSAMV
301: HMLPQGLGGA TSVRVSNELG AGRPKIARLV ARTATILATT EGILVAIAMV SIRKVWGHCY SNEEEIVKYV GKMCFFLAGS HFLDAHQSIF SGIARGCGCQ
401: KIGAYVNLGA FYLWGIPIGI VLAFVYHVGG KGLWLGIILA ISAQVVIYSV VILRTNWDEQ VSFLLLFKVC FNFNNLC

Best Arabidopsis Sequence Match ( AT5G52450.1 )
(BLAST)

001: MRDDRERGEG DLSWPLIGEK SSVKEEVKKQ LWLSGPLIAV SLLQFCLQVI SVMFVGHLGS LPLSAASIAT SFASVTGFSF LMGTASALDT LCGQAYGAKK
101: YGMLGIQMQR AMFVLTLASI PLSIIWANTE HLLVFFGQNK SIATLAGSYA KFMIPSIFAY GLLQCFNRFL QAQNNVFPVV FCSGVTTSLH VLLCWVLVFK
201: SGLGFQGAAL ANSISYWLNV VLLFCYVKFS PSCSLTWTGF SKEALRDILP FLRLAVPSAL MVCLEMWSFE LLVLLSGLLP NPVLETSVLS ICLNTSGTMW
301: MIPFGLSGAA STRISNELGA GNPKVAKLAV RVVICIAVAE SIVIGSVLIL IRNIWGLAYS SELEVVSYVA SMMPILALGN FLDSLQCVLS GVARGCGWQK
401: IGAIINLGSY YLVGVPSGLL LAFHFHVGGR GLWLGIICAL VVQVFGLGLV TIFTNWDEEA KKATNRIESS SSVKDFAVDD RSVVVF

Arabidopsis Description

DTX16Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178UMN3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.