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Potato
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Potato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • mitochondrion 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:mitochondrion, plastid, secretory
BaCelLo:plastid
iPSORT:mitochondrion
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400049147 Potato plasma membrane 74.88 63.17
PGSC0003DMT400054780 Potato plasma membrane 50.0 54.52
VIT_19s0014g02450.t01 Wine grape plasma membrane 57.32 48.25
PGSC0003DMT400054764 Potato plasma membrane 61.22 47.63
VIT_19s0014g02440.t01 Wine grape plasma membrane 55.37 46.04
KRH27266 Soybean plasma membrane 32.2 45.99
KRH22058 Soybean plasma membrane 55.12 44.84
PGSC0003DMT400014996 Potato plasma membrane 47.56 44.52
KRH22061 Soybean cytosol, peroxisome, plasma membrane 53.9 44.2
GSMUA_Achr2P13840_001 Banana plasma membrane 46.83 43.74
AT3G23560.1 Thale cress plasma membrane 50.73 43.61
AT3G23550.1 Thale cress plasma membrane 49.76 43.5
TraesCS2D01G142100.1 Wheat plasma membrane 42.44 39.91
TraesCS1A01G032900.1 Wheat plasma membrane 45.61 38.88
TraesCS1D01G034300.1 Wheat plasma membrane 45.61 38.88
TraesCS2B01G163300.3 Wheat cytosol, plasma membrane, vacuole 45.61 38.64
TraesCS6D01G332800.1 Wheat cytosol, plasma membrane, vacuole 45.61 38.56
GSMUA_Achr4P27830_001 Banana plasma membrane 52.44 38.53
HORVU0Hr1G039670.1 Barley plasma membrane 45.37 38.51
TraesCS2A01G261700.1 Wheat plasma membrane 45.85 38.29
Os07t0108200-00 Rice cytosol, peroxisome, plasma membrane 45.37 38.27
Os07t0502200-01 Rice plasma membrane 44.88 38.17
TraesCS2A01G139200.1 Wheat plasma membrane 44.88 38.17
TraesCS6A01G350400.1 Wheat plasma membrane 44.88 38.1
TraesCS2D01G262300.1 Wheat plasma membrane 45.61 38.09
TraesCS2B01G280500.1 Wheat plasma membrane 45.61 38.09
HORVU1Hr1G003490.2 Barley plasma membrane 44.39 38.08
TraesCS6B01G383300.1 Wheat plasma membrane 44.63 37.89
KRH22064 Soybean plasma membrane 49.51 37.87
HORVU6Hr1G084080.3 Barley plasma membrane 44.63 37.65
Bra023719.1-P Field mustard plasma membrane 49.02 37.64
Zm00001d021569_P001 Maize plasma membrane 43.17 36.65
HORVU2Hr1G063690.5 Barley cytosol, plasma membrane 45.37 35.84
Zm00001d018638_P001 Maize cytosol, peroxisome, plasma membrane 41.22 33.8
OQU88303 Sorghum cytosol, peroxisome, plasma membrane 41.46 33.6
HORVU0Hr1G002600.4 Barley golgi 29.51 33.15
PGSC0003DMT400070650 Potato plasma membrane 26.1 31.85
EER99421 Sorghum plasma membrane 43.9 30.41
PGSC0003DMT400014431 Potato plasma membrane 36.1 29.9
PGSC0003DMT400065417 Potato plasma membrane 33.66 28.93
PGSC0003DMT400046664 Potato plasma membrane 33.41 28.9
PGSC0003DMT400070690 Potato endoplasmic reticulum, plasma membrane, vacuole 31.95 28.67
PGSC0003DMT400048259 Potato plasma membrane 32.68 28.09
PGSC0003DMT400026959 Potato cytosol, plasma membrane, vacuole 32.68 27.92
PGSC0003DMT400078716 Potato extracellular, plasma membrane, vacuole 29.27 27.91
PGSC0003DMT400043016 Potato cytosol, plasma membrane, vacuole 31.71 27.72
PGSC0003DMT400078840 Potato golgi, plasma membrane, vacuole 30.73 26.98
PGSC0003DMT400015301 Potato plasma membrane 31.71 26.92
PGSC0003DMT400046656 Potato plasma membrane 30.49 26.82
PGSC0003DMT400078374 Potato plasma membrane 27.56 26.46
PGSC0003DMT400078371 Potato plasma membrane 29.27 26.43
PGSC0003DMT400046666 Potato plasma membrane 31.22 26.18
PGSC0003DMT400078715 Potato plasma membrane 29.76 25.74
CDY18117 Canola cytosol, extracellular, plasma membrane 0.24 2.86
Protein Annotations
MapMan:24.2.4.1.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855
GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085
UniProt:M1CCE7InterPro:MATE_famPFAM:PF01554EnsemblPlantsGene:PGSC0003DMG402025043PGSC:PGSC0003DMG402025043EnsemblPlants:PGSC0003DMT400064458
PANTHER:PTHR11206PANTHER:PTHR11206:SF78TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI000294C28FSEG:seg
Description
TRANSPARENT TESTA 12 protein [Source:PGSC_GENE;Acc:PGSC0003DMG402025043]
Coordinates
chr10:-:1977371..1983591
Molecular Weight (calculated)
45010.9 Da
IEP (calculated)
7.497
GRAVY (calculated)
0.683
Length
410 amino acids
Sequence
(BLAST)
001: MAMDSSSSNS LKSPMLPSTS LETNKWWITI ISKVIDVEEA KNQILFSLPM IVVTSCFYFI NLVSVMFAGH LGKFELAASN LGNSWAEVTG LSLMVGISGG
101: LETLCGQGYG AKMYKMLGIH LQISCIISFI FSTIIAISWW YSDKILILLH QDPDIAKEAS VFLKFLIPGL FAYGFLQNIL VFLQSQSIVM PLVVCSMASL
201: VLHIGITYCL VYWTSLGFKG APLAASISIW ISVLMLVVYI LCSKKKFSQI WREGLSFVSF HHIFTNLKLS LPSAAMICLE YWDHEFFVLS AGLMPNSETT
301: TSLIAMSVNT EAVAFMVSYG LSAAASTRVA NELGGGNIDK AKHAMVVTLK LCVLLALIVD LALFFGHSAW AGLFRFMDGL NMWASLPSFG LIATNIIDQM
401: GKNGRLNKEQ
Best Arabidopsis Sequence Match ( AT3G23560.2 )
(BLAST)
001: MADPATSSPL LDDHVGGEDE RGRRSRSSTL VQKVIDVEEA KAQMIYSLPM ILTNVFYYCI PITSVMFASH LGQLELAGAT LANSWATVSG FAFMVGLSGS
101: LETLCGQGFG AKRYRMLGVH LQSSCIVSLV FSILITIFWF FTESIFGLLR QDPSISKQAA LYMKYQAPGL LAYGFLQNIL RFCQTQSIIA PLVIFSFVPL
201: VINIATAYVL VYVAGLGFIG APIATSISLW IAFLSLGTYV MCSEKFKETW TGFSLESFRY IVINLTLSLP SAAMVCLEYW AFEILVFLAG VMPNPEINTS
301: LVAICVNTEA ISYMLTYGLS AAASTRVSNE LGAGNVKGAK KATSVSVKLS LVLALGVVIV LLVGHDGWVG LFSDSYVIKE EFASLRFFLA ASITLDSIQG
401: VLSGKRSNIY FFFLLI
Arabidopsis Description
DTX19Protein DETOXIFICATION 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH2]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.