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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d018638_P001 Maize cytosol, peroxisome, plasma membrane 89.13 90.2
Os07t0108200-00 Rice cytosol, peroxisome, plasma membrane 71.94 74.9
TraesCS2B01G280500.1 Wheat plasma membrane 71.94 74.13
TraesCS2D01G262300.1 Wheat plasma membrane 71.74 73.93
TraesCS2A01G261700.1 Wheat plasma membrane 71.54 73.73
HORVU2Hr1G063690.5 Barley cytosol, plasma membrane 71.34 69.56
GSMUA_Achr2P13840_001 Banana plasma membrane 51.38 59.23
CDY65688 Canola plasma membrane 40.12 53.28
VIT_19s0014g02450.t01 Wine grape plasma membrane 49.6 51.54
VIT_19s0014g02440.t01 Wine grape plasma membrane 50.0 51.32
KRH22058 Soybean plasma membrane 50.99 51.19
GSMUA_Achr4P27830_001 Banana plasma membrane 56.32 51.08
PGSC0003DMT400054780 Potato plasma membrane 37.55 50.53
AT3G23550.1 Thale cress plasma membrane 46.25 49.89
AT3G23560.1 Thale cress plasma membrane 46.84 49.69
CDY17027 Canola plasma membrane 38.93 49.25
Bra040861.1-P Field mustard plasma membrane 45.85 49.15
CDY09031 Canola plasma membrane 46.05 49.05
Solyc10g007360.2.1 Tomato plastid 46.64 48.96
CDY18116 Canola plasma membrane 46.44 48.76
KRH22061 Soybean cytosol, peroxisome, plasma membrane 47.83 48.4
Solyc10g007100.2.1 Tomato plasma membrane 46.44 48.16
PGSC0003DMT400049147 Potato plasma membrane 46.25 48.15
KRH27266 Soybean plasma membrane 26.88 47.39
EER99421 Sorghum plasma membrane 55.34 47.3
CDY18118 Canola plasma membrane 41.9 47.11
Bra023720.1-P Field mustard plasma membrane 44.47 46.58
Solyc10g007380.1.1 Tomato plastid 43.87 43.36
KRH22064 Soybean plasma membrane 44.86 42.35
PGSC0003DMT400014996 Potato plasma membrane 36.17 41.78
PGSC0003DMT400054764 Potato plasma membrane 43.28 41.56
PGSC0003DMT400064458 Potato plasma membrane 33.6 41.46
EES06698 Sorghum plasma membrane 38.54 40.62
Solyc10g007370.1.1 Tomato plasma membrane, plastid 43.68 40.4
Bra023719.1-P Field mustard plasma membrane 42.49 40.26
KXG19962 Sorghum plasma membrane 37.15 39.25
KXG21780 Sorghum plasma membrane 34.39 38.67
EER90350 Sorghum plasma membrane 36.56 38.3
EES06697 Sorghum plasma membrane 36.56 37.99
KXG26020 Sorghum plasma membrane 35.97 37.92
OQU77813 Sorghum plasma membrane 35.38 37.76
EES03448 Sorghum plasma membrane 36.17 37.42
OQU80064 Sorghum plasma membrane 21.15 36.03
OQU78400 Sorghum cytosol, plasma membrane, vacuole 35.57 36.0
KXG30060 Sorghum plasma membrane 35.97 35.62
EER95390 Sorghum plasma membrane 33.4 33.47
OQU77045 Sorghum plastid 26.28 32.36
CDY18117 Canola cytosol, extracellular, plasma membrane 1.78 25.71
Protein Annotations
MapMan:24.2.4.1.1UniProt:A0A1W0W1S6GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085InterPro:MATE_famEnsemblPlants:OQU88303ProteinID:OQU88303ProteinID:OQU88303.1PFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF78EnsemblPlantsGene:SORBI_3002G006500TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0009DC8227
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr2:-:626412..630254
Molecular Weight (calculated)
54201.3 Da
IEP (calculated)
6.574
GRAVY (calculated)
0.584
Length
506 amino acids
Sequence
(BLAST)
001: MGEEEAAAPL LVPGSNGDDP RRLNLTLAIH GDDDEWKAAG EAAASSARHH HALPGWDWAE VRGQLAFAAP MVTTNMAYYA IPLVSVMYAG RLGDLQLAAA
101: TLGNSWGTVT GIALMTGLSG SLETLCGQGY GARAYRTMGV HLQASLLTSA LASAAVSLLW LYSEPLLVFL RQDPGTSRLA ADFLRHSVPA LFAYGFIQCA
201: LRFLQAQSVV APLVAFSLLP LAAHIGVAHA LVNALGMGFA GAAVATSVSL WLSFLMLAAY VMASDRFRET WPGLTTEAFR HVLPGMKLAI PSAVMVCFEY
301: WSFEFLVLFA GLMPESQVST SIIAMCQNTE TISYMITYGF AAVISTRVSN ELGARNIGKA KKALTVSLAL SLMLGVAFLL LLGLGHDLWV RLFSSSQAVA
401: SAFASMTPLL IGSVVLDSTQ GVLSGVARGC GWQHLAAWTN LVAFYVIGLP LAILFGFKLG FQTKGLWMGQ ICGLLCQNCV LFFITLRTNW EELDLTMFNK
501: DNDFVC
Best Arabidopsis Sequence Match ( AT3G23560.1 )
(BLAST)
001: MADPATSSPL LDDHVGGEDE RGRRSRSSTL VQKVIDVEEA KAQMIYSLPM ILTNVFYYCI PITSVMFASH LGQLELAGAT LANSWATVSG FAFMVGLSGS
101: LETLCGQGFG AKRYRMLGVH LQSSCIVSLV FSILITIFWF FTESIFGLLR QDPSISKQAA LYMKYQAPGL LAYGFLQNIL RFCQTQSIIA PLVIFSFVPL
201: VINIATAYVL VYVAGLGFIG APIATSISLW IAFLSLGTYV MCSEKFKETW TGFSLESFRY IVINLTLSLP SAAMVCLEYW AFEILVFLAG VMPNPEINTS
301: LVAICVNTEA ISYMLTYGLS AAASTRVSNE LGAGNVKGAK KATSVSVKLS LVLALGVVIV LLVGHDGWVG LFSDSYVIKE EFASLRFFLA ASITLDSIQG
401: VLSGVARGCG WQRLVTVINL ATFYLIGMPI AAFCGFKLKF YAKGLWIGLI CGIFCQSSSL LLMTIFRKWT KLNVATV
Arabidopsis Description
DTX19Protein DETOXIFICATION 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.