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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:peroxisome, plasma membrane, plastid
BaCelLo:plastid
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY09031 Canola plasma membrane 95.64 97.05
CDY65688 Canola plasma membrane 72.2 91.34
CDY17027 Canola plasma membrane 73.65 88.75
AT3G23560.1 Thale cress plasma membrane 84.65 85.53
AT3G23550.1 Thale cress plasma membrane 82.57 84.86
CDY18118 Canola plasma membrane 78.42 84.0
GSMUA_Achr2P13840_001 Banana plasma membrane 50.0 54.9
TraesCS2D01G142100.1 Wheat plasma membrane 49.17 54.36
Os07t0502200-01 Rice plasma membrane 53.32 53.32
TraesCS1A01G032900.1 Wheat plasma membrane 53.11 53.22
TraesCS6A01G350400.1 Wheat plasma membrane 52.9 52.8
TraesCS6D01G332800.1 Wheat cytosol, plasma membrane, vacuole 53.11 52.78
HORVU1Hr1G003490.2 Barley plasma membrane 52.28 52.72
TraesCS6B01G383300.1 Wheat plasma membrane 52.7 52.59
TraesCS2A01G139200.1 Wheat plasma membrane 52.28 52.28
TraesCS2B01G280500.1 Wheat plasma membrane 53.11 52.14
TraesCS2B01G163300.3 Wheat cytosol, plasma membrane, vacuole 52.28 52.07
HORVU6Hr1G084080.3 Barley plasma membrane 52.49 52.06
TraesCS2A01G261700.1 Wheat plasma membrane 52.9 51.93
TraesCS2D01G262300.1 Wheat plasma membrane 52.7 51.73
TraesCS1D01G034300.1 Wheat plasma membrane 51.24 51.35
Os07t0108200-00 Rice cytosol, peroxisome, plasma membrane 51.66 51.23
HORVU0Hr1G039670.1 Barley plasma membrane 51.24 51.14
Zm00001d021569_P001 Maize plasma membrane 51.24 51.14
HORVU2Hr1G063690.5 Barley cytosol, plasma membrane 52.9 49.13
HORVU0Hr1G002600.4 Barley golgi 35.68 47.12
GSMUA_Achr4P27830_001 Banana plasma membrane 54.36 46.95
Zm00001d018638_P001 Maize cytosol, peroxisome, plasma membrane 48.34 46.6
OQU88303 Sorghum cytosol, peroxisome, plasma membrane 48.76 46.44
EER99421 Sorghum plasma membrane 51.45 41.89
CDX91652 Canola plasma membrane 41.29 40.95
CDY27066 Canola plasma membrane 41.08 40.66
CDY00530 Canola plasma membrane 40.25 40.08
CDX73002 Canola plasma membrane 33.2 40.0
CDY68867 Canola plasma membrane 38.8 39.96
CDY60134 Canola plasma membrane 38.59 39.32
CDY54775 Canola plasma membrane 39.63 39.06
CDX68215 Canola plasma membrane 28.01 39.02
CDY49289 Canola plasma membrane 39.21 38.49
CDX72467 Canola plasma membrane 39.0 38.37
CDX84324 Canola plasma membrane 38.17 38.02
CDY71492 Canola plasma membrane 33.82 37.56
CDY52017 Canola plasma membrane 37.34 37.5
CDX79559 Canola plasma membrane 37.76 37.37
CDY50254 Canola plasma membrane 37.34 37.27
CDY27886 Canola plasma membrane 37.34 37.27
CDY36231 Canola plasma membrane 34.85 36.92
CDX81701 Canola plasma membrane 36.72 36.88
CDY36531 Canola plasma membrane 36.51 36.67
CDY39617 Canola plasma membrane 36.51 36.67
CDY17238 Canola plasma membrane 38.17 36.15
CDY71754 Canola plasma membrane 19.5 35.61
CDY15087 Canola plasma membrane 34.85 35.29
CDY21736 Canola plasma membrane 34.85 35.29
CDY72127 Canola plasma membrane 23.03 34.91
CDX83993 Canola plasma membrane 31.54 34.7
CDX81843 Canola plasma membrane 34.23 34.66
CDY50255 Canola cytosol, peroxisome, vacuole 17.01 34.31
CDX87974 Canola cytosol, peroxisome, plasma membrane 33.61 34.25
CDY12351 Canola cytosol, peroxisome, plasma membrane 33.61 33.61
CDY67968 Canola plasma membrane 33.4 33.26
CDX96130 Canola plasma membrane 32.57 33.26
CDX96304 Canola plasma membrane 33.61 33.13
CDX86801 Canola plasma membrane 34.23 32.93
CDX72778 Canola plasma membrane 33.2 32.59
CDY13241 Canola plasma membrane 34.02 32.48
CDY72452 Canola cytosol, extracellular, mitochondrion 6.22 32.26
CDY49220 Canola plasma membrane 32.57 32.24
CDY36229 Canola plasma membrane 32.78 31.98
CDX68324 Canola plasma membrane 31.95 31.62
CDX96129 Canola plasma membrane 33.82 31.47
CDY36230 Canola plasma membrane 34.02 30.6
CDX77471 Canola plasma membrane 23.86 29.11
CDY18117 Canola cytosol, extracellular, plasma membrane 1.87 25.71
CDX84649 Canola vacuole 37.97 18.87
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078FYQ8UniProt:A0A078FYQ8EnsemblPlants:CDY18116ProteinID:CDY18116ProteinID:CDY18116.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150
GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00002624001
InterPro:MATE_famPFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF78TIGRFAMs:TIGR00797TMHMM:TMhelix
UniParc:UPI0004EE3B7BSEG:seg::::
Description
BnaA01g23770DProtein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A078FYQ8]
Coordinates
chrLK032082:+:571363..573721
Molecular Weight (calculated)
52090.2 Da
IEP (calculated)
7.685
GRAVY (calculated)
0.712
Length
482 amino acids
Sequence
(BLAST)
001: MLHQEDPMAG RINTATPLLT DHEGGGNDRG RRSSSWVQKL IDVEESKAQI IYSLPMIFTN LFIYCIPLTS VMFASHLGQL ELAGATLANS WATVTGFAFM
101: TGLSGALETL CGQGFGAKSY RMLGIHLQSS CIVSLVFTIL ISIFWFFTEP VFGLIGQDPN ISRQAALYMK YQAPGLLAYG FLQSIVRFCQ TQSIVTPLVI
201: FSFVPLVINI GIAYVLVYLA GLGFIGAPIA TSISLWIAFL SLGTYVICSD NFKETWTGFS LEPFSYVVIN LTLSLPSAAM VCLEYWAFEI LVFLAGLMPN
301: PEITTSLVAI CVNTESISYM LTYGLSAAAS TRVSNELGAG NVQGAKKATS VTVKLSLVLA FGVVLALLVG HDGWVGLFSN SPVIKEEFAS LRFFLAASIT
401: LDSIQGVLSG VARGCGWQHV VTVINLGTFY LIGMPIAAFC GFKLKLYAKG LWIGLISGIL SQSSSLLLMT IFRKWTKINA SV
Best Arabidopsis Sequence Match ( AT3G23560.1 )
(BLAST)
001: MADPATSSPL LDDHVGGEDE RGRRSRSSTL VQKVIDVEEA KAQMIYSLPM ILTNVFYYCI PITSVMFASH LGQLELAGAT LANSWATVSG FAFMVGLSGS
101: LETLCGQGFG AKRYRMLGVH LQSSCIVSLV FSILITIFWF FTESIFGLLR QDPSISKQAA LYMKYQAPGL LAYGFLQNIL RFCQTQSIIA PLVIFSFVPL
201: VINIATAYVL VYVAGLGFIG APIATSISLW IAFLSLGTYV MCSEKFKETW TGFSLESFRY IVINLTLSLP SAAMVCLEYW AFEILVFLAG VMPNPEINTS
301: LVAICVNTEA ISYMLTYGLS AAASTRVSNE LGAGNVKGAK KATSVSVKLS LVLALGVVIV LLVGHDGWVG LFSDSYVIKE EFASLRFFLA ASITLDSIQG
401: VLSGVARGCG WQRLVTVINL ATFYLIGMPI AAFCGFKLKF YAKGLWIGLI CGIFCQSSSL LLMTIFRKWT KLNVATV
Arabidopsis Description
DTX19Protein DETOXIFICATION 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.