Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- cytosol 1
- extracellular 1
- golgi 1
- plasma membrane 3
- endoplasmic reticulum 1
- vacuole 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS6B01G383300.1 | Wheat | plasma membrane | 97.52 | 97.52 |
| TraesCS6D01G332800.1 | Wheat | cytosol, plasma membrane, vacuole | 94.62 | 94.23 |
| HORVU6Hr1G084080.3 | Barley | plasma membrane | 91.3 | 90.74 |
| TraesCS2A01G139200.1 | Wheat | plasma membrane | 89.03 | 89.21 |
| TraesCS1A01G032900.1 | Wheat | plasma membrane | 79.71 | 80.04 |
| Os07t0502200-01 | Rice | plasma membrane | 77.85 | 78.01 |
| Zm00001d021569_P001 | Maize | plasma membrane | 77.23 | 77.23 |
| GSMUA_Achr2P13840_001 | Banana | plasma membrane | 57.14 | 62.87 |
| EER99421 | Sorghum | plasma membrane | 76.6 | 62.5 |
| TraesCS2A01G261700.1 | Wheat | plasma membrane | 59.01 | 58.04 |
| CDY65688 | Canola | plasma membrane | 44.1 | 55.91 |
| GSMUA_Achr4P27830_001 | Banana | plasma membrane | 64.18 | 55.56 |
| VIT_19s0014g02440.t01 | Wine grape | plasma membrane | 55.69 | 54.56 |
| CDY17027 | Canola | plasma membrane | 44.51 | 53.75 |
| PGSC0003DMT400054780 | Potato | plasma membrane | 41.82 | 53.72 |
| VIT_19s0014g02450.t01 | Wine grape | plasma membrane | 54.04 | 53.59 |
| CDY09031 | Canola | plasma membrane | 52.17 | 53.05 |
| CDY18116 | Canola | plasma membrane | 52.8 | 52.9 |
| Solyc10g007100.2.1 | Tomato | plasma membrane | 53.42 | 52.87 |
| AT3G23560.1 | Thale cress | plasma membrane | 52.17 | 52.83 |
| PGSC0003DMT400049147 | Potato | plasma membrane | 52.59 | 52.26 |
| Bra040861.1-P | Field mustard | plasma membrane | 50.93 | 52.12 |
| Solyc10g007360.2.1 | Tomato | plastid | 51.35 | 51.45 |
| AT3G23550.1 | Thale cress | plasma membrane | 49.69 | 51.17 |
| KRH22058 | Soybean | plasma membrane | 53.21 | 50.99 |
| Bra023720.1-P | Field mustard | plasma membrane | 50.1 | 50.1 |
| CDY18118 | Canola | plasma membrane | 46.38 | 49.78 |
| KRH22061 | Soybean | cytosol, peroxisome, plasma membrane | 50.72 | 49.0 |
| KRH27266 | Soybean | plasma membrane | 28.99 | 48.78 |
| Solyc10g007380.1.1 | Tomato | plastid | 49.48 | 46.68 |
| PGSC0003DMT400064458 | Potato | plasma membrane | 38.1 | 44.88 |
| PGSC0003DMT400054764 | Potato | plasma membrane | 48.86 | 44.78 |
| KRH22064 | Soybean | plasma membrane | 49.48 | 44.59 |
| Solyc10g007370.1.1 | Tomato | plasma membrane, plastid | 49.48 | 43.69 |
| Bra023719.1-P | Field mustard | plasma membrane | 47.41 | 42.88 |
| PGSC0003DMT400014996 | Potato | plasma membrane | 38.51 | 42.47 |
| TraesCS3A01G229400.1 | Wheat | plasma membrane | 33.13 | 40.1 |
| TraesCS5A01G368700.1 | Wheat | plasma membrane | 39.34 | 39.42 |
| TraesCS7A01G230500.1 | Wheat | plasma membrane | 39.13 | 39.13 |
| TraesCS2A01G278500.1 | Wheat | plasma membrane | 38.1 | 38.98 |
| TraesCS2A01G278400.1 | Wheat | plasma membrane | 38.72 | 38.96 |
| TraesCS7A01G494300.1 | Wheat | plasma membrane | 37.89 | 38.53 |
| TraesCS7A01G554500.1 | Wheat | plasma membrane | 37.27 | 38.3 |
| TraesCS5A01G368500.1 | Wheat | plasma membrane | 38.1 | 38.17 |
| TraesCS7A01G500700.1 | Wheat | plasma membrane | 37.47 | 38.11 |
| TraesCS7A01G230100.1 | Wheat | cytosol, nucleus, peroxisome | 38.1 | 38.1 |
| TraesCS5A01G368800.1 | Wheat | mitochondrion | 36.85 | 38.03 |
| TraesCS7A01G230200.1 | Wheat | cytosol, nucleus, plasma membrane | 38.1 | 38.02 |
| TraesCS3A01G055900.1 | Wheat | plasma membrane | 37.89 | 37.97 |
| TraesCS7A01G411800.1 | Wheat | plasma membrane | 38.1 | 37.94 |
| TraesCS3A01G265100.1 | Wheat | plasma membrane | 37.89 | 37.89 |
| TraesCS3A01G029100.1 | Wheat | plasma membrane | 37.06 | 37.84 |
| TraesCS5A01G368600.2 | Wheat | plasma membrane | 38.72 | 37.7 |
| TraesCS7A01G497300.1 | Wheat | endoplasmic reticulum, nucleus, plasma membrane | 36.65 | 37.5 |
| TraesCS7A01G033200.1 | Wheat | plasma membrane | 36.44 | 37.05 |
| TraesCS2A01G202000.1 | Wheat | plasma membrane | 38.3 | 36.13 |
| TraesCS1A01G380900.1 | Wheat | plasma membrane | 36.44 | 35.7 |
| TraesCS7A01G473200.1 | Wheat | plasma membrane | 33.54 | 34.18 |
| CDY18117 | Canola | cytosol, extracellular, plasma membrane | 1.66 | 22.86 |
Protein Annotations
| MapMan:24.2.4.1.1 | ncoils:Coil | GO:GO:0003674 | GO:GO:0005215 | GO:GO:0005575 | GO:GO:0006810 |
| GO:GO:0006855 | GO:GO:0008150 | GO:GO:0015238 | GO:GO:0015297 | GO:GO:0016020 | GO:GO:0055085 |
| InterPro:MATE_fam | PFAM:PF01554 | PANTHER:PTHR11206 | PANTHER:PTHR11206:SF199 | TIGRFAMs:TIGR00797 | TMHMM:TMhelix |
| EnsemblPlantsGene:TraesCS6A01G350400 | EnsemblPlants:TraesCS6A01G350400.1 | TIGR:cd13132 | : | : | : |
Description
No Description!
Coordinates
chr6A:+:582248696..582254487
Molecular Weight (calculated)
52175.9 Da
IEP (calculated)
7.993
GRAVY (calculated)
0.785
Length
483 amino acids
Sequence
(BLAST)
(BLAST)
001: MSSAAPLLEP ADGKGGEAKR PCGCPPAWLR RLINTEEAWA QLQFAVPMVL TNMSYYGIPL VSVMFSGHLG DVHLAGATLG NSWATVTGYA FVTGMSGALE
101: TLCGQAYGAR LYRMLGLYLQ SSLIMSAVVS MVIAVLWLFT EPLLLCLRQE PEVSRAAAVF IRYQIPGLFA FSFLQCLIRY LQTQSIVLPL VVCSVVPFML
201: HIALNHLLVN VLGFGLIGAS TAISITLWFS CLMLLGYVMQ SKEFSETWKG FSADALNYVL PTLKLATPSA IMVCLEYWAF ELLVLIAGLL PNSTVSTSLI
301: AMCSSTEAIA YMITYGFSAA VSTRVSNEIG AGNVDMAKNA VAVTLKLSVF LAFSFILLLG FGHGLWARLF SGSKVIVAEF AAITPLLMIS IVLDSAQGVL
401: SGVARGCGWQ HLAAMTNLVA FYFIGMPLAM LFAFKLNFYT TGLWSGLICG LTCQTSTLVV ITARTKWSKI VDAMQQEKAN YIA
101: TLCGQAYGAR LYRMLGLYLQ SSLIMSAVVS MVIAVLWLFT EPLLLCLRQE PEVSRAAAVF IRYQIPGLFA FSFLQCLIRY LQTQSIVLPL VVCSVVPFML
201: HIALNHLLVN VLGFGLIGAS TAISITLWFS CLMLLGYVMQ SKEFSETWKG FSADALNYVL PTLKLATPSA IMVCLEYWAF ELLVLIAGLL PNSTVSTSLI
301: AMCSSTEAIA YMITYGFSAA VSTRVSNEIG AGNVDMAKNA VAVTLKLSVF LAFSFILLLG FGHGLWARLF SGSKVIVAEF AAITPLLMIS IVLDSAQGVL
401: SGVARGCGWQ HLAAMTNLVA FYFIGMPLAM LFAFKLNFYT TGLWSGLICG LTCQTSTLVV ITARTKWSKI VDAMQQEKAN YIA
001: MADPATSSPL LDDHVGGEDE RGRRSRSSTL VQKVIDVEEA KAQMIYSLPM ILTNVFYYCI PITSVMFASH LGQLELAGAT LANSWATVSG FAFMVGLSGS
101: LETLCGQGFG AKRYRMLGVH LQSSCIVSLV FSILITIFWF FTESIFGLLR QDPSISKQAA LYMKYQAPGL LAYGFLQNIL RFCQTQSIIA PLVIFSFVPL
201: VINIATAYVL VYVAGLGFIG APIATSISLW IAFLSLGTYV MCSEKFKETW TGFSLESFRY IVINLTLSLP SAAMVCLEYW AFEILVFLAG VMPNPEINTS
301: LVAICVNTEA ISYMLTYGLS AAASTRVSNE LGAGNVKGAK KATSVSVKLS LVLALGVVIV LLVGHDGWVG LFSDSYVIKE EFASLRFFLA ASITLDSIQG
401: VLSGVARGCG WQRLVTVINL ATFYLIGMPI AAFCGFKLKF YAKGLWIGLI CGIFCQSSSL LLMTIFRKWT KLNVATV
101: LETLCGQGFG AKRYRMLGVH LQSSCIVSLV FSILITIFWF FTESIFGLLR QDPSISKQAA LYMKYQAPGL LAYGFLQNIL RFCQTQSIIA PLVIFSFVPL
201: VINIATAYVL VYVAGLGFIG APIATSISLW IAFLSLGTYV MCSEKFKETW TGFSLESFRY IVINLTLSLP SAAMVCLEYW AFEILVFLAG VMPNPEINTS
301: LVAICVNTEA ISYMLTYGLS AAASTRVSNE LGAGNVKGAK KATSVSVKLS LVLALGVVIV LLVGHDGWVG LFSDSYVIKE EFASLRFFLA ASITLDSIQG
401: VLSGVARGCG WQRLVTVINL ATFYLIGMPI AAFCGFKLKF YAKGLWIGLI CGIFCQSSSL LLMTIFRKWT KLNVATV
Arabidopsis Description
DTX19Protein DETOXIFICATION 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH2]
SUBAcon: [plasma membrane]
SUBAcon: [plasma membrane]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.