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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • cytosol 1
  • plasma membrane 2
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, plasma membrane
MultiLoc:cytosol
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6B01G383300.1 Wheat plasma membrane 91.56 92.13
TraesCS6D01G332800.1 Wheat cytosol, plasma membrane, vacuole 91.77 91.96
TraesCS6A01G350400.1 Wheat plasma membrane 90.74 91.3
HORVU0Hr1G039670.1 Barley plasma membrane 88.07 88.61
HORVU0Hr1G002600.4 Barley golgi 60.7 80.82
HORVU1Hr1G003490.2 Barley plasma membrane 78.6 79.92
Os07t0502200-01 Rice plasma membrane 77.78 78.42
Zm00001d021569_P001 Maize plasma membrane 75.1 75.57
GSMUA_Achr2P13840_001 Banana plasma membrane 56.17 62.19
EER99421 Sorghum plasma membrane 75.31 61.82
GSMUA_Achr4P27830_001 Banana plasma membrane 63.17 55.02
CDY65688 Canola plasma membrane 43.0 54.86
VIT_19s0014g02440.t01 Wine grape plasma membrane 55.35 54.56
HORVU2Hr1G063690.5 Barley cytosol, plasma membrane 57.41 53.76
CDY17027 Canola plasma membrane 43.83 53.25
PGSC0003DMT400054780 Potato plasma membrane 40.95 52.93
CDY09031 Canola plasma membrane 51.65 52.84
CDY18116 Canola plasma membrane 52.06 52.49
VIT_19s0014g02450.t01 Wine grape plasma membrane 52.06 51.95
Solyc10g007100.2.1 Tomato plasma membrane 52.06 51.84
AT3G23560.1 Thale cress plasma membrane 50.82 51.78
Solyc10g007360.2.1 Tomato plastid 51.03 51.45
Bra040861.1-P Field mustard plasma membrane 49.79 51.27
PGSC0003DMT400049147 Potato plasma membrane 51.23 51.23
AT3G23550.1 Thale cress plasma membrane 49.18 50.96
KRH22058 Soybean plasma membrane 52.67 50.79
Bra023720.1-P Field mustard plasma membrane 48.97 49.28
KRH22061 Soybean cytosol, peroxisome, plasma membrane 50.62 49.2
KRH27266 Soybean plasma membrane 29.01 49.13
CDY18118 Canola plasma membrane 45.27 48.89
Solyc10g007380.1.1 Tomato plastid 48.35 45.9
PGSC0003DMT400064458 Potato plasma membrane 37.65 44.63
KRH22064 Soybean plasma membrane 48.97 44.4
PGSC0003DMT400054764 Potato plasma membrane 47.74 44.02
Solyc10g007370.1.1 Tomato plasma membrane, plastid 48.15 42.78
Bra023719.1-P Field mustard plasma membrane 46.71 42.51
PGSC0003DMT400014996 Potato plasma membrane 37.65 41.78
HORVU0Hr1G022350.4 Barley plasma membrane 37.86 38.33
HORVU3Hr1G005230.2 Barley endoplasmic reticulum, plasma membrane 32.1 37.68
HORVU7Hr1G121100.1 Barley plasma membrane 36.01 37.23
HORVU2Hr1G068140.14 Barley endoplasmic reticulum, golgi, mitochondrion, peroxisome 38.89 37.13
HORVU7Hr1G112340.13 Barley cytosol, plasma membrane 38.07 36.78
HORVU2Hr1G039850.10 Barley peroxisome, plasma membrane, plastid 38.07 36.71
HORVU7Hr1G047080.17 Barley plasma membrane 38.27 36.61
HORVU1Hr1G084190.9 Barley mitochondrion, peroxisome, plasma membrane 36.42 35.69
HORVU7Hr1G108070.4 Barley golgi, mitochondrion, plasma membrane 22.43 33.44
HORVU2Hr1G068090.13 Barley plastid 37.65 32.45
HORVU7Hr1G047070.3 Barley mitochondrion 36.63 32.42
HORVU7Hr1G095900.1 Barley plastid 34.98 31.78
HORVU5Hr1G091820.13 Barley peroxisome 31.69 31.24
CDY18117 Canola cytosol, extracellular, plasma membrane 1.85 25.71
HORVU3Hr1G063430.3 Barley plastid 26.75 23.13
Protein Annotations
EnsemblPlants:HORVU6Hr1G084080.3EnsemblPlantsGene:HORVU6Hr1G084080GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085InterPro:MATE_famPANTHER:PTHR11206PANTHER:PTHR11206:SF199PFAM:PF01554SEG:seg
TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI000B4753A2UniProt:A0A287UZV8MapMan:24.2.4.1.1:
Description
Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A287UZV8]
Coordinates
chrchr6H:-:553264615..553273865
Molecular Weight (calculated)
52389.5 Da
IEP (calculated)
6.492
GRAVY (calculated)
0.755
Length
486 amino acids
Sequence
(BLAST)
001: MSSAPLLGGP EPADGKGGEG EARPSSCSPA WLRRLIDTEE AWAQLQFAVP MVLTNMSYYG IPLVSVMFSG HLGNVHLAGA TLANSWANVT GYAFVTGMSG
101: ALETLCGQAY GARLYRMLGL YLQSSLIMSA VVSMVIAVLW LFTEPLLLCL HQEPEVSRAA AVFIRYQIPG LFAFSFLQCL IRYLQTQSVV VPLVVCSGVP
201: FLLHIALNHL LVNVLGFGFV GASAAISITF WFSCLMLLGY VIRSNEFSET WKGFSADAFN YVMPTIKLAT PSAVMVCLEY WAFELLVLIA GLLPNSTVST
301: SVIAMCSSTE AIAYMITYGF SAAVSTRVSN EIGAGNVDMA KNAVAVTLKL SVFLAFFFIL LMGFGNGLWA SLFSGDEVIV AEFAAFTPFL TISIVLDSAQ
401: GILSGVARGC GWQHLAAMTN LVAFYFIGMP LAVLFAFKLN FYTKGLWSGL ICGLTCQTST LVVITARTKW SKIVDAMQQE KANYVA
Best Arabidopsis Sequence Match ( AT3G23560.1 )
(BLAST)
001: MADPATSSPL LDDHVGGEDE RGRRSRSSTL VQKVIDVEEA KAQMIYSLPM ILTNVFYYCI PITSVMFASH LGQLELAGAT LANSWATVSG FAFMVGLSGS
101: LETLCGQGFG AKRYRMLGVH LQSSCIVSLV FSILITIFWF FTESIFGLLR QDPSISKQAA LYMKYQAPGL LAYGFLQNIL RFCQTQSIIA PLVIFSFVPL
201: VINIATAYVL VYVAGLGFIG APIATSISLW IAFLSLGTYV MCSEKFKETW TGFSLESFRY IVINLTLSLP SAAMVCLEYW AFEILVFLAG VMPNPEINTS
301: LVAICVNTEA ISYMLTYGLS AAASTRVSNE LGAGNVKGAK KATSVSVKLS LVLALGVVIV LLVGHDGWVG LFSDSYVIKE EFASLRFFLA ASITLDSIQG
401: VLSGVARGCG WQRLVTVINL ATFYLIGMPI AAFCGFKLKF YAKGLWIGLI CGIFCQSSSL LLMTIFRKWT KLNVATV
Arabidopsis Description
DTX19Protein DETOXIFICATION 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.