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Rice
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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:cytosol
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
 plasma membrane: 27800704
msms PMID: 27800704 doi
J Cao, C Yang, L Li, L Jiang, Y Wu, C Wu, Q Bu, G Xia, X Liu, Y Luo, J Liu
Huai'an Institute of Agricultural Sciences, Huai'an, 223001, China., Institute of Analytical Chemistry and Synthetic and Functional Biomolecules Center, College of Chemistry and Molecular Engineering, Peking University, Beijing, 100871, China; and., Northeast Institute of Geography and Agroecology, Key Laboratory of Soybean Molecular Design Breeding, Chinese Academy of Sciences, Harbin, 150081, China., State Key Laboratory of Plant Genomics, Institute of Microbiology, Chinese Academy of Sciences, Beijing, 100101, China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2D01G142100.1 Wheat plasma membrane 74.9 82.8
Zm00001d021569_P001 Maize plasma membrane 80.08 79.92
TraesCS2A01G139200.1 Wheat plasma membrane 78.84 78.84
TraesCS2B01G163300.3 Wheat cytosol, plasma membrane, vacuole 79.05 78.72
HORVU0Hr1G039670.1 Barley plasma membrane 78.84 78.67
TraesCS6B01G383300.1 Wheat plasma membrane 78.42 78.26
TraesCS6D01G332800.1 Wheat cytosol, plasma membrane, vacuole 78.63 78.14
TraesCS6A01G350400.1 Wheat plasma membrane 78.01 77.85
HORVU6Hr1G084080.3 Barley plasma membrane 78.42 77.78
HORVU1Hr1G003490.2 Barley plasma membrane 73.44 74.06
HORVU0Hr1G002600.4 Barley golgi 56.02 73.97
TraesCS1D01G034300.1 Wheat plasma membrane 73.03 73.18
TraesCS1A01G032900.1 Wheat plasma membrane 72.41 72.56
EER99421 Sorghum plasma membrane 80.5 65.54
GSMUA_Achr2P13840_001 Banana plasma membrane 57.05 62.64
Os07t0108200-00 Rice cytosol, peroxisome, plasma membrane 59.75 59.26
CDY65688 Canola plasma membrane 43.98 55.64
VIT_19s0014g02440.t01 Wine grape plasma membrane 55.6 54.36
CDY17027 Canola plasma membrane 45.02 54.25
AT3G23560.1 Thale cress plasma membrane 53.53 54.09
CDY09031 Canola plasma membrane 53.11 53.89
GSMUA_Achr4P27830_001 Banana plasma membrane 62.24 53.76
VIT_19s0014g02450.t01 Wine grape plasma membrane 53.94 53.39
CDY18116 Canola plasma membrane 53.32 53.32
Bra040861.1-P Field mustard plasma membrane 51.45 52.54
AT3G23550.1 Thale cress plasma membrane 51.04 52.45
PGSC0003DMT400054780 Potato plasma membrane 39.83 51.06
KRH22058 Soybean plasma membrane 53.32 50.99
PGSC0003DMT400049147 Potato plasma membrane 51.04 50.62
Solyc10g007100.2.1 Tomato plasma membrane 51.24 50.61
CDY18118 Canola plasma membrane 47.1 50.44
Bra023720.1-P Field mustard plasma membrane 50.41 50.31
KRH22061 Soybean cytosol, peroxisome, plasma membrane 50.62 48.8
Solyc10g007360.2.1 Tomato plastid 48.76 48.76
KRH27266 Soybean plasma membrane 28.22 47.39
Solyc10g007380.1.1 Tomato plastid 48.13 45.31
PGSC0003DMT400064458 Potato plasma membrane 38.17 44.88
KRH22064 Soybean plasma membrane 49.79 44.78
PGSC0003DMT400054764 Potato plasma membrane 47.72 43.64
Bra023719.1-P Field mustard plasma membrane 47.72 43.07
Solyc10g007370.1.1 Tomato plasma membrane, plastid 47.93 42.23
PGSC0003DMT400014996 Potato plasma membrane 37.55 41.32
Os06t0495500-01 Rice plasma membrane 40.46 40.71
Os04t0373400-01 Rice plasma membrane 39.83 39.75
Os06t0494400-01 Rice plasma membrane 39.42 38.78
Os01t0684900-01 Rice plasma membrane 38.8 38.09
Os10t0345100-01 Rice plasma membrane 37.76 38.0
Os10t0344900-01 Rice plasma membrane 37.55 37.95
Os06t0707100-01 Rice plasma membrane 37.14 37.06
Os01t0504500-02 Rice plasma membrane 37.97 36.45
Os05t0554000-01 Rice cytosol, peroxisome, plasma membrane 30.5 36.03
Os10t0344500-00 Rice plasma membrane, vacuole 36.93 34.3
CDY18117 Canola cytosol, extracellular, plasma membrane 1.87 25.71
Protein Annotations
MapMan:24.2.4.1.1ProteinID:BAC83974.1ProteinID:BAF21638.1ProteinID:BAT01651.1GO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297
GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:MATE_famEnsemblPlantsGene:Os07g0502200EnsemblPlants:Os07t0502200-01
PFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF199UniProt:Q6Z493TIGRFAMs:TIGR00797TMHMM:TMhelix
UniParc:UPI00001BF509SEG:seg::::
Description
Multi antimicrobial extrusion protein MatE family protein. (Os07t0502200-01)
Coordinates
chr7:-:18956816..18963021
Molecular Weight (calculated)
51375.5 Da
IEP (calculated)
8.037
GRAVY (calculated)
0.763
Length
482 amino acids
Sequence
(BLAST)
001: MASTDPLLGG KEEEEGGGEV RRARRWWVGR VVDTEEAWAQ TRFAVPMVLT NMSYYAIPLV SVMFSGHLGD VHLAGATLGN SWATVTGYAF VTGMSGALET
101: LCGQAYGARM YRMLGLYLQS SLLMSAAVSV LVSALWCFTE PLLLLLRQDP AVSAAASAFV RAQVPGLFAF SFLQCLLRYL QTQSVVAPLV ACSLAPFLLH
201: VALAHLLVNA LGLGLAGAGA AVSITFWASC LMLLAYVLRS ERFAETWNGF SAEAFRFVVP TIKLATPSAV MVCLEYWAFE LLVLIAGLLP NPTVSTSLIA
301: MCSSTEAIAY MITYGFSAAV STRVSNEIGA GNVEGAKNAV AVTLKLSVFL AAAFVLLLGF GHGLWAGLFS GSAIIAAEFA AVAPLMMASI LLDSAQGVLS
401: GVARGCGWQH LAAVTNLVAF YVIGMPLSIF FAFKLKWYTK GLWMGLICGL TCQTCTLMVI TARTKWSKIV DAMQEKKASY VA
Best Arabidopsis Sequence Match ( AT3G23560.1 )
(BLAST)
001: MADPATSSPL LDDHVGGEDE RGRRSRSSTL VQKVIDVEEA KAQMIYSLPM ILTNVFYYCI PITSVMFASH LGQLELAGAT LANSWATVSG FAFMVGLSGS
101: LETLCGQGFG AKRYRMLGVH LQSSCIVSLV FSILITIFWF FTESIFGLLR QDPSISKQAA LYMKYQAPGL LAYGFLQNIL RFCQTQSIIA PLVIFSFVPL
201: VINIATAYVL VYVAGLGFIG APIATSISLW IAFLSLGTYV MCSEKFKETW TGFSLESFRY IVINLTLSLP SAAMVCLEYW AFEILVFLAG VMPNPEINTS
301: LVAICVNTEA ISYMLTYGLS AAASTRVSNE LGAGNVKGAK KATSVSVKLS LVLALGVVIV LLVGHDGWVG LFSDSYVIKE EFASLRFFLA ASITLDSIQG
401: VLSGVARGCG WQRLVTVINL ATFYLIGMPI AAFCGFKLKF YAKGLWIGLI CGIFCQSSSL LLMTIFRKWT KLNVATV
Arabidopsis Description
DTX19Protein DETOXIFICATION 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.