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Rice
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
  • peroxisome 1
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS2A01G261700.1 Wheat plasma membrane 81.28 80.45
TraesCS2B01G280500.1 Wheat plasma membrane 81.28 80.45
TraesCS2D01G262300.1 Wheat plasma membrane 81.07 80.24
HORVU2Hr1G063690.5 Barley cytosol, plasma membrane 81.07 75.92
Zm00001d018638_P001 Maize cytosol, peroxisome, plasma membrane 74.28 72.2
OQU88303 Sorghum cytosol, peroxisome, plasma membrane 74.9 71.94
GSMUA_Achr2P13840_001 Banana plasma membrane 57.61 63.78
Os07t0502200-01 Rice plasma membrane 59.26 59.75
CDY65688 Canola plasma membrane 44.44 56.69
VIT_19s0014g02440.t01 Wine grape plasma membrane 57.41 56.59
VIT_19s0014g02450.t01 Wine grape plasma membrane 55.56 55.44
PGSC0003DMT400054780 Potato plasma membrane 41.77 53.99
GSMUA_Achr4P27830_001 Banana plasma membrane 61.93 53.94
KRH22058 Soybean plasma membrane 55.35 53.37
AT3G23550.1 Thale cress plasma membrane 51.23 53.09
CDY17027 Canola plasma membrane 43.0 52.25
Solyc10g007360.2.1 Tomato plastid 51.65 52.07
CDY09031 Canola plasma membrane 50.62 51.79
Bra040861.1-P Field mustard plasma membrane 50.21 51.69
CDY18116 Canola plasma membrane 51.23 51.66
Solyc10g007100.2.1 Tomato plasma membrane 51.85 51.64
PGSC0003DMT400049147 Potato plasma membrane 51.44 51.44
AT3G23560.1 Thale cress plasma membrane 50.41 51.36
KRH22061 Soybean cytosol, peroxisome, plasma membrane 52.06 50.6
CDY18118 Canola plasma membrane 45.68 49.33
Bra023720.1-P Field mustard plasma membrane 48.97 49.28
KRH27266 Soybean plasma membrane 28.4 48.08
PGSC0003DMT400064458 Potato plasma membrane 38.27 45.37
Solyc10g007380.1.1 Tomato plastid 47.74 45.31
KRH22064 Soybean plasma membrane 49.59 44.96
PGSC0003DMT400054764 Potato plasma membrane 47.94 44.21
PGSC0003DMT400014996 Potato plasma membrane 39.3 43.61
Bra023719.1-P Field mustard plasma membrane 47.12 42.88
Solyc10g007370.1.1 Tomato plasma membrane, plastid 48.15 42.78
Os06t0495500-01 Rice plasma membrane 40.33 40.92
Os06t0494400-01 Rice plasma membrane 39.92 39.59
Os04t0373400-01 Rice plasma membrane 39.3 39.54
Os06t0707100-01 Rice plasma membrane 38.68 38.92
Os01t0684900-01 Rice plasma membrane 38.27 37.88
Os10t0345100-01 Rice plasma membrane 37.04 37.58
Os10t0344900-01 Rice plasma membrane 36.42 37.11
Os05t0554000-01 Rice cytosol, peroxisome, plasma membrane 30.25 36.03
Os01t0504500-02 Rice plasma membrane 36.21 35.06
Os10t0344500-00 Rice plasma membrane, vacuole 37.04 34.68
CDY18117 Canola cytosol, extracellular, plasma membrane 2.06 28.57
Protein Annotations
MapMan:24.2.4.1.1EntrezGene:4342209UniProt:A0A0P0X1Q4ProteinID:BAS99730.1GO:GO:0003674GO:GO:0005215
GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297
GO:GO:0016020GO:GO:0016021GO:GO:0055085InterPro:MATE_famEnsemblPlantsGene:Os07g0108200EnsemblPlants:Os07t0108200-00
PFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF78TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0003938D55
RefSeq:XP_015646704.1SEG:seg::::
Description
Similar to transparent testa 12 protein. (Os07t0108200-00)
Coordinates
chr7:-:440518..444836
Molecular Weight (calculated)
52849.0 Da
IEP (calculated)
6.981
GRAVY (calculated)
0.591
Length
486 amino acids
Sequence
(BLAST)
001: MGGDERAVAA PLLQQQQDGG GGDGERRRRR WWWGWWDGEE AAGQLAFAAP MVATSMAYYA IPLVSVMYAG RLGELELAGA TLGNSWGTVT GIALMTGLSG
101: SLETLCGQGY GAKMYHMMGV YLQASIITSA FFSVLVSLLW FYSEPVLIFL RQDPEVTRTA TLFLRYSIPA QFAYGFIQCT LRFLQTQSVV TPLVVFALLP
201: LVLHFGITHA FVHYLGFGYA GAGMSTSVSL WLSFLMLAAY VCLSERFKHT WEGFSTEAFR HVLPGLKLAI PSAVMVCFEY WAFEVLVLVA GLMPNSHMST
301: SIIAMCENTE AISYMITYGF AAAISTRVSN ELGAGNVAKA KKALAVTLVL SLLLGVAFLL LLGLGHDLWA GLFSKSDAVI SEFASMTPLL IGSVVLDSTQ
401: GVLSGVSRGC GWQHLAAWTN LVAFYIVGLP LSILFGFKLG LQTKGLWLGQ ICGLLLQNAV LLFITLRTKW ERLELTMNGK EDGFVC
Best Arabidopsis Sequence Match ( AT3G23550.1 )
(BLAST)
001: MADPTSKDDH DGEGGRDKSS TFVQKLIDVE EAKTQIIYSL PMIFTNLFYY CIPLTSVMFA SQLGQLELAG ATLANSWATV TGFAFMTGLS GALETLCGQG
101: FGAKSYRMLG IHLQSSCIVS LVFTILITIL WFFTESVFLL LRQDPSISKQ AALYMKYLAP GLLAYGFLQN ILRFCQTQCI VTPLVLFSFL PLVINIGTTY
201: ALVHLAGLGF IGAPIATSIS LWIAFVSLGF YVICSDKFKE TWTGFSMESF HHVVLNLTLS IPSAAMVCLE YWAFEILVFL AGLMRNPEIT TSLVAICVNT
301: ESISYMLTCG LSAATSTRVS NELGAGNVKG AKKATSVSVK LSLVLALGVV IAILVGHDAW VGLFSNSHVI KEGFASLRFF LAASITLDSI QGVLSGVARG
401: CGWQRLATVI NLGTFYLIGM PISVLCGFKL KLHAKGLWIG LICGMFCQSA SLLLMTIFRK WTKLTAATV
Arabidopsis Description
DTX18Protein DETOXIFICATION 18 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.