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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • extracellular 2
  • endoplasmic reticulum 2
  • vacuole 2
  • plasma membrane 5
  • golgi 2
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:secretory
BaCelLo:secretory
iPSORT:plastid
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY17027 Canola plasma membrane 87.4 83.25
CDY09031 Canola plasma membrane 91.34 73.26
CDY18116 Canola plasma membrane 91.34 72.2
AT3G23560.1 Thale cress plasma membrane 88.98 71.07
AT3G23550.1 Thale cress plasma membrane 86.35 70.15
CDY18118 Canola plasma membrane 78.48 66.44
GSMUA_Achr2P13840_001 Banana plasma membrane 58.27 50.57
TraesCS2D01G142100.1 Wheat plasma membrane 54.59 47.71
Os07t0108200-00 Rice cytosol, peroxisome, plasma membrane 56.69 44.44
TraesCS6A01G350400.1 Wheat plasma membrane 55.91 44.1
Os07t0502200-01 Rice plasma membrane 55.64 43.98
TraesCS1A01G032900.1 Wheat plasma membrane 55.12 43.66
TraesCS2A01G261700.1 Wheat plasma membrane 56.17 43.58
TraesCS2B01G280500.1 Wheat plasma membrane 56.17 43.58
HORVU0Hr1G002600.4 Barley golgi 41.73 43.56
TraesCS6B01G383300.1 Wheat plasma membrane 55.12 43.48
TraesCS2D01G262300.1 Wheat plasma membrane 55.91 43.38
TraesCS2A01G139200.1 Wheat plasma membrane 54.86 43.36
HORVU1Hr1G003490.2 Barley plasma membrane 54.33 43.31
TraesCS2B01G163300.3 Wheat cytosol, plasma membrane, vacuole 54.86 43.18
TraesCS6D01G332800.1 Wheat cytosol, plasma membrane, vacuole 54.86 43.09
HORVU6Hr1G084080.3 Barley plasma membrane 54.86 43.0
HORVU0Hr1G039670.1 Barley plasma membrane 54.33 42.86
Zm00001d021569_P001 Maize plasma membrane 54.33 42.86
TraesCS1D01G034300.1 Wheat plasma membrane 53.28 42.2
HORVU2Hr1G063690.5 Barley cytosol, plasma membrane 56.17 41.23
GSMUA_Achr4P27830_001 Banana plasma membrane 59.58 40.68
Zm00001d018638_P001 Maize cytosol, peroxisome, plasma membrane 53.02 40.4
OQU88303 Sorghum cytosol, peroxisome, plasma membrane 53.28 40.12
CDX73002 Canola plasma membrane 38.58 36.75
CDY00530 Canola plasma membrane 45.14 35.54
EER99421 Sorghum plasma membrane 54.59 35.14
CDY68867 Canola plasma membrane 43.04 35.04
CDX91652 Canola plasma membrane 44.09 34.57
CDY54775 Canola plasma membrane 44.36 34.56
CDY27066 Canola plasma membrane 43.83 34.29
CDX79559 Canola plasma membrane 43.83 34.29
CDY60134 Canola plasma membrane 42.52 34.25
CDX84324 Canola plasma membrane 43.04 33.88
CDX72467 Canola plasma membrane 43.04 33.47
CDY49289 Canola plasma membrane 43.04 33.4
CDY72127 Canola plasma membrane 27.82 33.33
CDY52017 Canola plasma membrane 41.99 33.33
CDY71492 Canola plasma membrane 37.01 32.49
CDX68215 Canola plasma membrane 29.4 32.37
CDY39617 Canola plasma membrane 40.68 32.29
CDY36531 Canola plasma membrane 40.68 32.29
CDX81701 Canola plasma membrane 40.68 32.29
CDY17238 Canola plasma membrane 43.04 32.22
CDY36231 Canola plasma membrane 38.06 31.87
CDY50254 Canola plasma membrane 39.9 31.47
CDY27886 Canola plasma membrane 39.9 31.47
CDY21736 Canola plasma membrane 38.58 30.88
CDX96304 Canola plasma membrane 39.11 30.47
CDY15087 Canola plasma membrane 37.8 30.25
CDX83993 Canola plasma membrane 34.65 30.14
CDX96130 Canola plasma membrane 37.27 30.08
CDX72778 Canola plasma membrane 38.58 29.94
CDX81843 Canola plasma membrane 37.27 29.83
CDY67968 Canola plasma membrane 37.53 29.55
CDX87974 Canola cytosol, peroxisome, plasma membrane 36.48 29.39
CDY71754 Canola plasma membrane 20.21 29.17
CDY49220 Canola plasma membrane 37.27 29.16
CDY72452 Canola cytosol, extracellular, mitochondrion 7.09 29.03
CDX68324 Canola plasma membrane 37.01 28.95
CDY12351 Canola cytosol, peroxisome, plasma membrane 36.48 28.84
CDX96129 Canola plasma membrane 39.11 28.76
CDY36229 Canola plasma membrane 37.01 28.54
CDX86801 Canola plasma membrane 37.27 28.34
CDY36230 Canola plasma membrane 39.37 27.99
CDY13241 Canola plasma membrane 37.01 27.92
CDY50255 Canola cytosol, peroxisome, vacuole 17.32 27.62
CDX77471 Canola plasma membrane 27.56 26.58
CDY18117 Canola cytosol, extracellular, plasma membrane 2.36 25.71
CDX84649 Canola vacuole 43.83 17.22
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078JDI4UniProt:A0A078JDI4EnsemblPlants:CDY65688ProteinID:CDY65688ProteinID:CDY65688.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150
GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00048011001
InterPro:MATE_famPFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF78TMHMM:TMhelixUniParc:UPI0004EDF639
Description
BnaC08g46710DBnaC08g46710D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JDI4]
Coordinates
chrLK034900:+:19775..21886
Molecular Weight (calculated)
41316.1 Da
IEP (calculated)
8.459
GRAVY (calculated)
0.764
Length
381 amino acids
Sequence
(BLAST)
001: MLASHLGQLE LAAATLANSW TTVTGFAFMV GLSGALETLC GQGFGAKSYR MLGIHLQSSC IVSLVFTIFI SILWFFTESV FGLIRQDPNI SKQAALYMKY
101: QAPGLLAYGF LQNILRFCQT QSMITPLVVF SFVPLVINIG ISYVLGLGFI GAPIATSISL WIAFLSLGTY VICSDKFKDT WTGFSLESIR YVVTNLTLSL
201: PSAAMVCLEY WAFEILVVLA GLMPNPEITT SLVAICVNTE AISYMLTYGL SAAASTRVSN ELGAGNVKGH DGWVGLFSNS PLIKDEFASL RFFLAASITL
301: DSIQGVLSGV ARGCGWQRVV TVINLGTFYF IGMPIAAFCG FKLKLYAKGL WIGLICGLFS QSSSLLLMTI FRKWTKLNSS V
Best Arabidopsis Sequence Match ( AT3G23560.1 )
(BLAST)
001: MADPATSSPL LDDHVGGEDE RGRRSRSSTL VQKVIDVEEA KAQMIYSLPM ILTNVFYYCI PITSVMFASH LGQLELAGAT LANSWATVSG FAFMVGLSGS
101: LETLCGQGFG AKRYRMLGVH LQSSCIVSLV FSILITIFWF FTESIFGLLR QDPSISKQAA LYMKYQAPGL LAYGFLQNIL RFCQTQSIIA PLVIFSFVPL
201: VINIATAYVL VYVAGLGFIG APIATSISLW IAFLSLGTYV MCSEKFKETW TGFSLESFRY IVINLTLSLP SAAMVCLEYW AFEILVFLAG VMPNPEINTS
301: LVAICVNTEA ISYMLTYGLS AAASTRVSNE LGAGNVKGAK KATSVSVKLS LVLALGVVIV LLVGHDGWVG LFSDSYVIKE EFASLRFFLA ASITLDSIQG
401: VLSGVARGCG WQRLVTVINL ATFYLIGMPI AAFCGFKLKF YAKGLWIGLI CGIFCQSSSL LLMTIFRKWT KLNVATV
Arabidopsis Description
DTX19Protein DETOXIFICATION 19 [Source:UniProtKB/Swiss-Prot;Acc:Q9LUH2]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.