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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY52017 Canola plasma membrane 91.78 83.75
CDY71492 Canola plasma membrane 74.89 75.58
CDY36531 Canola plasma membrane 81.05 73.96
CDX81701 Canola plasma membrane 81.05 73.96
CDY39617 Canola plasma membrane 80.59 73.54
AT1G15180.1 Thale cress plasma membrane 76.26 69.29
AT1G15170.1 Thale cress plasma membrane 74.66 67.98
AT1G15150.1 Thale cress plasma membrane 72.6 65.3
AT1G15160.1 Thale cress plasma membrane 71.46 64.27
VIT_01s0011g04450.t01 Wine grape cytosol, golgi, plasma membrane 56.39 51.35
KRH35829 Soybean golgi, nucleus, vacuole 54.79 50.31
KRH35828 Soybean plasma membrane 54.57 50.0
PGSC0003DMT400078374 Potato plasma membrane 48.63 49.88
VIT_01s0011g04430.t01 Wine grape plasma membrane 54.34 49.48
KRH35832 Soybean plasma membrane 53.42 49.26
Solyc05g008510.2.1 Tomato plasma membrane 53.65 49.16
PGSC0003DMT400015301 Potato plasma membrane 54.11 49.07
KRG90944 Soybean plasma membrane 53.2 48.95
Solyc04g007530.2.1 Tomato plasma membrane 53.65 48.86
PGSC0003DMT400078371 Potato plasma membrane 50.23 48.46
KRH53068 Soybean plasma membrane 52.74 48.12
GSMUA_Achr3P29080_001 Banana plasma membrane 47.95 47.4
TraesCS3A01G229400.1 Wheat plasma membrane 42.92 47.12
TraesCS1B01G016700.1 Wheat plasma membrane 35.62 46.71
GSMUA_Achr4P03730_001 Banana endoplasmic reticulum, plasma membrane, vacuole 46.8 46.28
CDY67968 Canola plasma membrane 50.0 45.25
CDX96304 Canola plasma membrane 50.0 44.79
Solyc05g008500.1.1 Tomato plasma membrane 46.35 44.52
CDX72778 Canola plasma membrane 49.77 44.4
CDX68324 Canola plasma membrane 49.32 44.35
CDX77471 Canola plasma membrane 39.95 44.3
CDX73002 Canola plasma membrane 40.41 44.25
CDY49220 Canola plasma membrane 49.09 44.15
Zm00001d009494_P001 Maize plasma membrane 46.8 43.71
CDY72127 Canola plasma membrane 31.51 43.4
Os01t0684900-01 Rice plasma membrane 47.72 42.57
TraesCSU01G003900.1 Wheat cytosol, plasma membrane, vacuole 47.95 42.51
TraesCS3B01G255200.2 Wheat plasma membrane 46.35 42.47
TraesCS1D01G388600.1 Wheat plasma membrane 47.49 42.28
TraesCS3D01G227600.2 Wheat plasma membrane 46.12 42.26
TraesCS3D01G265400.1 Wheat plasma membrane 46.58 42.24
CDX81843 Canola plasma membrane 45.89 42.23
OQU78400 Sorghum cytosol, plasma membrane, vacuole 48.17 42.2
CDY50254 Canola plasma membrane 46.35 42.03
TraesCS3B01G298700.1 Wheat cytosol, plasma membrane, vacuole 46.35 42.03
CDY27886 Canola plasma membrane 46.35 42.03
CDY21736 Canola plasma membrane 45.66 42.02
TraesCS1A01G380900.1 Wheat plasma membrane 47.26 41.99
TraesCS3A01G265100.1 Wheat plasma membrane 46.12 41.82
Os05t0554000-01 Rice cytosol, peroxisome, plasma membrane 38.81 41.67
HORVU1Hr1G084190.9 Barley mitochondrion, peroxisome, plasma membrane 46.8 41.33
Zm00001d043838_P002 Maize plasma membrane 45.89 41.27
TraesCS2B01G229100.1 Wheat plasma membrane 45.66 41.15
CDY15087 Canola plasma membrane 44.52 40.97
TraesCS2D01G214300.1 Wheat plasma membrane 45.43 40.95
CDY00530 Canola plasma membrane 45.21 40.91
EES03448 Sorghum plasma membrane 45.43 40.7
CDY54775 Canola plasma membrane 45.43 40.7
CDX84324 Canola plasma membrane 44.29 40.08
Zm00001d027921_P002 Maize plasma membrane 45.21 39.92
CDY72452 Canola cytosol, extracellular, mitochondrion 8.45 39.78
HORVU2Hr1G039850.10 Barley peroxisome, plasma membrane, plastid 45.66 39.68
CDY60134 Canola plasma membrane 42.69 39.53
CDX79559 Canola plasma membrane 43.84 39.43
CDY68867 Canola plasma membrane 42.01 39.32
CDX91652 Canola plasma membrane 43.61 39.3
TraesCS2A01G202000.1 Wheat plasma membrane 45.89 39.26
TraesCS1D01G009800.1 Wheat plasma membrane 44.75 39.12
CDY27066 Canola plasma membrane 43.38 39.01
Os01t0504500-02 Rice plasma membrane 44.52 38.84
CDX96130 Canola plasma membrane 41.55 38.56
CDY17238 Canola plasma membrane 44.52 38.31
EER95390 Sorghum plasma membrane 44.06 38.22
CDX86801 Canola plasma membrane 43.61 38.12
CDY36229 Canola plasma membrane 42.92 38.06
CDX68215 Canola plasma membrane 29.91 37.86
CDX87974 Canola cytosol, peroxisome, plasma membrane 40.87 37.84
CDY49289 Canola plasma membrane 42.24 37.68
CDY13241 Canola plasma membrane 43.38 37.62
CDY36231 Canola plasma membrane 39.04 37.58
CDX72467 Canola plasma membrane 41.78 37.35
CDY12351 Canola cytosol, peroxisome, plasma membrane 40.87 37.14
CDY71754 Canola plasma membrane 22.37 37.12
CDX96129 Canola plasma membrane 43.15 36.49
CDY65688 Canola plasma membrane 30.14 34.65
CDY36230 Canola plasma membrane 42.24 34.51
CDY50255 Canola cytosol, peroxisome, vacuole 18.72 34.31
CDY17027 Canola plasma membrane 29.22 32.0
CDY18116 Canola plasma membrane 34.7 31.54
CDY09031 Canola plasma membrane 34.02 31.37
CDY18118 Canola plasma membrane 31.51 30.67
HORVU3Hr1G063430.3 Barley plastid 31.74 24.73
CDY18117 Canola cytosol, extracellular, plasma membrane 1.6 20.0
CDX84649 Canola vacuole 43.61 19.69
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078D9H9EnsemblPlants:CDX83993ProteinID:CDX83993ProteinID:CDX83993.1GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238
GO:GO:0015297GO:GO:0016020GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00139796001InterPro:MATE_famPFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF87TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0004EECD3DSEG:seg
Description
BnaC08g16520D
Coordinates
chrLK031834:-:1632402..1634448
Molecular Weight (calculated)
47805.1 Da
IEP (calculated)
5.687
GRAVY (calculated)
0.824
Length
438 amino acids
Sequence
(BLAST)
001: MSDAESSLLL PVDRVDKVTC MDLRNGSFTE ELKRLFYFAA PMAAVVIAQF TLQIISMVMV DTLSGQAYGA KLYRKLGVQT YTAMFCLTLV CIPFSIIWFN
101: IEKLLVFLGQ DQAIAHEAGR YAAWLIPGLF SYASKITPLL ITSTLVFCFH APLCWLLVYK SGLGFLGGAV AMGLSNWLCA IILGCIMCFS SACSETRAPL
201: SMEIFNGVGE FFRYALPSAA MVCLEWWSFE LIILLSGLLP NPELETSVLS SCLQTIATVS AIPIAIAAAA STRISNELGA GNSRAAHIVV YTATFLAVME
301: SLVVSMSLLV GRSVFGYVFS SDERTVDYVA KMAPLLSISI ILDGLQAVLA AGIARGCGWQ HIGAYINLGS FYLCGIPFAA TLAFWFNLEG VGLWIGIQAG
401: ALVQNFLLGL FTGFTNWQNQ VLLFPFFYVS FFMTCFYR
Best Arabidopsis Sequence Match ( AT1G15150.1 )
(BLAST)
001: MQDAERTTND PVDRIEKVTW RDLQDGSFTA ELKRLICFAA PMAAVVIIQF MIQIISMVMV GHLGRLSLAS ASFAVSFCNV TGFSFIIGLS CALDTLSGQA
101: YGAKLYRKLG VQAYTAMFCL TLVCLPLSLL WFNMGKLIVI LGQDPAIAHE AGRYAAWLIP GLFAYAVLQP LIRYFKNQSL ITPLLVTSSV VFCIHVPLCW
201: LLVYKSGLGH IGGALALSLS YWLYAIFLGS FMYYSSACSE TRAPLTMEIF EGVREFIKYA LPSAAMLCLE WWSYELIILL SGLLPNPQLE TSVLSICFET
301: LSITYSIPLA IAAAASTRIS NELGAGNSRA AHIVVYAAMS LAVMDALMVS MSLLAGRHVF GHVFSSDKKT IEYVAKMAPL VSISIILDSL QGVLSGVASG
401: CGWQHIGAYI NFGAFYLWGI PIAASLAFWV HLKGVGLWIG ILAGAVLQTL LLALVTGCTN WKTQAREARE RMAVAHESEL TESELPI
Arabidopsis Description
DTX10Protein DETOXIFICATION 10 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYL8]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.