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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plasma membrane, plastid
BaCelLo:plastid
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY27066 Canola plasma membrane 97.53 97.33
CDY00530 Canola plasma membrane 84.36 84.71
CDY54775 Canola plasma membrane 84.16 83.64
AT5G52450.1 Thale cress plasma membrane 82.3 82.3
CDX84324 Canola plasma membrane 76.75 77.07
CDX79559 Canola plasma membrane 74.69 74.54
CDY17238 Canola plasma membrane 77.16 73.67
CDY60134 Canola plasma membrane 66.46 68.29
CDY68867 Canola plasma membrane 65.64 68.16
CDY49289 Canola plasma membrane 68.52 67.82
CDX73002 Canola plasma membrane 55.35 67.25
CDX72467 Canola plasma membrane 67.08 66.53
CDX68215 Canola plasma membrane 47.33 66.47
VIT_17s0000g02990.t01 Wine grape plasma membrane 64.81 64.15
VIT_17s0000g02970.t01 Wine grape plasma membrane 65.02 64.1
KRH39120 Soybean plasma membrane 63.79 63.39
KRH41776 Soybean cytosol, peroxisome, plasma membrane 62.14 60.64
PGSC0003DMT400014431 Potato plasma membrane 60.7 59.6
Solyc03g118970.2.1 Tomato plasma membrane 60.49 59.39
KRH39118 Soybean endoplasmic reticulum, golgi, plasma membrane 57.82 59.28
KRH39117 Soybean golgi, plasma membrane 52.06 56.98
KRH41780 Soybean plasma membrane 55.35 56.63
KRH48598 Soybean plasma membrane 52.67 54.82
KRH48596 Soybean plasma membrane 52.47 54.37
KRH48599 Soybean vacuole 45.06 51.9
CDY71492 Canola plasma membrane 41.98 47.0
CDX81701 Canola plasma membrane 46.3 46.88
CDY39617 Canola plasma membrane 45.88 46.46
CDY36531 Canola plasma membrane 45.47 46.04
CDY72127 Canola plasma membrane 29.63 45.28
CDY52017 Canola plasma membrane 44.65 45.21
CDY72452 Canola cytosol, extracellular, mitochondrion 8.64 45.16
CDX96304 Canola plasma membrane 45.06 44.79
CDX72778 Canola plasma membrane 44.86 44.4
CDY65688 Canola plasma membrane 34.57 44.09
CDY67968 Canola plasma membrane 43.83 44.01
CDX83993 Canola plasma membrane 39.3 43.61
CDX68324 Canola plasma membrane 43.42 43.33
CDY50254 Canola plasma membrane 43.0 43.27
CDY27886 Canola plasma membrane 43.0 43.27
CDY21736 Canola plasma membrane 42.18 43.07
CDY15087 Canola plasma membrane 42.18 43.07
CDX81843 Canola plasma membrane 41.77 42.65
CDY49220 Canola plasma membrane 42.59 42.51
CDY17027 Canola plasma membrane 34.98 42.5
CDX87974 Canola cytosol, peroxisome, plasma membrane 40.95 42.07
CDY12351 Canola cytosol, peroxisome, plasma membrane 41.15 41.49
CDY09031 Canola plasma membrane 40.53 41.47
CDY18116 Canola plasma membrane 40.95 41.29
CDX96130 Canola plasma membrane 39.3 40.47
CDY36231 Canola plasma membrane 37.86 40.44
CDX77471 Canola plasma membrane 32.72 40.25
CDY18118 Canola plasma membrane 36.83 39.78
CDY36229 Canola plasma membrane 39.71 39.07
CDX86801 Canola plasma membrane 40.12 38.92
CDY50255 Canola cytosol, peroxisome, vacuole 19.14 38.91
CDY71754 Canola plasma membrane 20.99 38.64
CDY13241 Canola plasma membrane 40.12 38.61
CDX84649 Canola vacuole 74.69 37.42
CDX96129 Canola plasma membrane 39.71 37.26
CDY36230 Canola plasma membrane 39.3 35.63
CDY18117 Canola cytosol, extracellular, plasma membrane 2.06 28.57
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078DRZ1EnsemblPlants:CDX91652ProteinID:CDX91652ProteinID:CDX91652.1ncoils:Coil
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150
GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00153106001
InterPro:MATE_famPFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF198TIGRFAMs:TIGR00797TMHMM:TMhelix
UniParc:UPI0004EBF1A3SEG:seg::::
Description
BnaC02g15080D
Coordinates
chrLK031868:-:1475158..1478173
Molecular Weight (calculated)
52743.3 Da
IEP (calculated)
7.958
GRAVY (calculated)
0.688
Length
486 amino acids
Sequence
(BLAST)
001: MRGRGEDVLS WPLLKDQEKK SSVKEEVKKQ LWLSGPLMGV SLLQYCLQVI SVMFVGHLGS LPLSTASLAT SFASVTGFSF LMGTASALDT LCGQSYGAKK
101: YGMLGIQMQR AMFVLTLLSV PLSIIWYNTE HFLVFFGQDK SIASLAGSYA TFMIPSIFAY GLLQCLNRFL QAQNNVFPVV LCSGITTCLH ILLCWVLVLN
201: SSLGFKGAAV ANSISYWLNA LLLFSYVKLS SSCSLTWTGF SKEALRDIIP FTRLAIPSAL MVCLEMWSYE LVVLLSGLLP NPVIETSVLS ICVNTSGIVW
301: MIPFGLSGAA STRVSNELGA GNPRVAKLAV HVVICLAVVE SIVIGLILIL VRNLWGMAYS SEPEVVTYIA SMMPILALGN FIDSIQCVLS GVARGCGLQK
401: IGALVNLGSY YLFGLPSGLL LGFHFHFRGR GLWLGIIFAM VVQVICLSLV TIFTNWDEEA EKATKRVQSS SDVKDASTDN DSTVVF
Best Arabidopsis Sequence Match ( AT5G52450.1 )
(BLAST)
001: MRDDRERGEG DLSWPLIGEK SSVKEEVKKQ LWLSGPLIAV SLLQFCLQVI SVMFVGHLGS LPLSAASIAT SFASVTGFSF LMGTASALDT LCGQAYGAKK
101: YGMLGIQMQR AMFVLTLASI PLSIIWANTE HLLVFFGQNK SIATLAGSYA KFMIPSIFAY GLLQCFNRFL QAQNNVFPVV FCSGVTTSLH VLLCWVLVFK
201: SGLGFQGAAL ANSISYWLNV VLLFCYVKFS PSCSLTWTGF SKEALRDILP FLRLAVPSAL MVCLEMWSFE LLVLLSGLLP NPVLETSVLS ICLNTSGTMW
301: MIPFGLSGAA STRISNELGA GNPKVAKLAV RVVICIAVAE SIVIGSVLIL IRNIWGLAYS SELEVVSYVA SMMPILALGN FLDSLQCVLS GVARGCGWQK
401: IGAIINLGSY YLVGVPSGLL LAFHFHVGGR GLWLGIICAL VVQVFGLGLV TIFTNWDEEA KKATNRIESS SSVKDFAVDD RSVVVF
Arabidopsis Description
DTX16Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178UMN3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.