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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • plasma membrane 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 2
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plasma membrane, plastid
BaCelLo:plastid
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:vacuole
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY60134 Canola plasma membrane 92.49 67.65
AT1G73700.1 Thale cress plasma membrane 92.49 67.23
Bra003832.1-P Field mustard plasma membrane 93.93 61.79
CDX73002 Canola plasma membrane 69.94 60.5
CDY49289 Canola plasma membrane 75.14 52.95
CDX72467 Canola plasma membrane 74.57 52.65
CDY68867 Canola plasma membrane 70.52 52.14
CDY72452 Canola cytosol, extracellular, mitochondrion 13.29 49.46
CDY00530 Canola plasma membrane 69.08 49.38
CDY54775 Canola plasma membrane 67.92 48.06
CDX91652 Canola plasma membrane 66.47 47.33
CDY27066 Canola plasma membrane 66.19 47.02
CDX84324 Canola plasma membrane 65.32 46.69
CDX79559 Canola plasma membrane 64.74 46.0
CDY17238 Canola plasma membrane 65.32 44.4
VIT_17s0000g02970.t01 Wine grape plasma membrane 59.54 41.78
KRH39120 Soybean plasma membrane 58.09 41.1
VIT_17s0000g02990.t01 Wine grape plasma membrane 57.51 40.53
KRH39118 Soybean endoplasmic reticulum, golgi, plasma membrane 55.2 40.3
KRH41776 Soybean cytosol, peroxisome, plasma membrane 56.65 39.36
PGSC0003DMT400014431 Potato plasma membrane 56.07 39.19
Solyc03g118970.2.1 Tomato plasma membrane 55.78 38.99
KRH48599 Soybean vacuole 46.24 37.91
KRH39117 Soybean golgi, plasma membrane 48.27 37.61
KRH48598 Soybean plasma membrane 50.0 37.05
KRH41780 Soybean plasma membrane 50.58 36.84
KRH48596 Soybean plasma membrane 49.42 36.46
CDX77471 Canola plasma membrane 36.99 32.41
CDX72778 Canola plasma membrane 45.66 32.18
CDX96304 Canola plasma membrane 45.38 32.11
CDX81701 Canola plasma membrane 44.22 31.88
CDY52017 Canola plasma membrane 44.22 31.88
CDY36531 Canola plasma membrane 43.93 31.67
CDY39617 Canola plasma membrane 43.93 31.67
CDY67968 Canola plasma membrane 43.93 31.41
CDY17027 Canola plasma membrane 36.13 31.25
CDX68324 Canola plasma membrane 43.64 31.01
CDY71492 Canola plasma membrane 38.73 30.88
CDY49220 Canola plasma membrane 43.35 30.8
CDX96130 Canola plasma membrane 41.62 30.51
CDX81843 Canola plasma membrane 41.91 30.46
CDY15087 Canola plasma membrane 41.91 30.46
CDY21736 Canola plasma membrane 41.33 30.04
CDX83993 Canola plasma membrane 37.86 29.91
CDX87974 Canola cytosol, peroxisome, plasma membrane 40.46 29.6
CDY18118 Canola plasma membrane 38.44 29.56
CDY65688 Canola plasma membrane 32.37 29.4
CDY72127 Canola plasma membrane 26.88 29.25
CDY12351 Canola cytosol, peroxisome, plasma membrane 40.46 29.05
CDX86801 Canola plasma membrane 41.91 28.94
CDY50254 Canola plasma membrane 40.17 28.78
CDY27886 Canola plasma membrane 40.17 28.78
CDY36229 Canola plasma membrane 41.04 28.74
CDY09031 Canola plasma membrane 39.31 28.63
CDY18117 Canola cytosol, extracellular, plasma membrane 2.89 28.57
CDY13241 Canola plasma membrane 41.62 28.51
CDY36231 Canola plasma membrane 36.99 28.13
CDY18116 Canola plasma membrane 39.02 28.01
CDX96129 Canola plasma membrane 41.33 27.61
CDY36230 Canola plasma membrane 41.62 26.87
CDX84649 Canola vacuole 64.74 23.09
CDY71754 Canola plasma membrane 13.58 17.8
CDY50255 Canola cytosol, peroxisome, vacuole 11.85 17.15
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078BU59EnsemblPlants:CDX68215ProteinID:CDX68215ProteinID:CDX68215.1GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238
GO:GO:0015297GO:GO:0016020GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00099480001InterPro:MATE_famPFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF198TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0004EF2ABBSEG:seg
Description
BnaA07g22550D
Coordinates
chrLK031787:+:4447583..4450149
Molecular Weight (calculated)
36560.0 Da
IEP (calculated)
7.242
GRAVY (calculated)
0.692
Length
346 amino acids
Sequence
(BLAST)
001: MGDGVTPPLL ITERNTTTIR VKEEVKKQLW LSAPLIGVSL LQYSLQVISV MFVGHLGSLP LSAASIATSF ASVTGFTFLL GTASALETLS ALAISVSYCW
101: TGFSKEAFQD IYDFSKIAFP SAVMVCLELW SFELLVLASG LLPNPVVETS VLSICLNTSL TIWQISVGLG GAASIRVSNE LGAGNPEVAK LAVYVIVGIA
201: VAQGIVVVTV LLSVRKVLGR AFSSDPKIIS YAASMIPIVA CGNFLDGLQC VLSGVARGCG WQKIGACVNL GSYYLVGVPL GLLLGFHFHI GGRGLWLGIV
301: TALAVQVLCL SLVTIFTNWD KEAKKATKRV GSSDDQDDNV EQSIPK
Best Arabidopsis Sequence Match ( AT1G15170.2 )
(BLAST)
001: MFCLALVCLP LSLIWFNMEK LLLILGQDPS IAHEAGKYAT WLIPGLFAYA VLQPLTRYFQ NQSLITPLLI TSYVVFCIHV PLCWFLVYNS GLGNLGGALA
101: ISLSNWLYAI FLGSFMYYSS ACSETRAPLS MEIFDGIGEF FKYALPSAAM ICLEWWSYEL IILLSGLLPN PQLETSVLSV CLQTISTMYS IPLAIAAAAS
201: TRISNELGAG NSRAAHIVVY AAMSLAVIDA LIVSMSLLIG RNLFGHIFSS DKETIDYVAK MAPLVSISLM LDALQGVLSG IARGCGWQHI GAYINLGAFY
301: LWGIPIAASL AFWIHLKGVG LWIGIQAGAV LQTLLLALVT GCTNWESQAD KARNRMALAY GT
Arabidopsis Description
DTX12Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178WNL0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.