Factsheet for Bra003832.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	plastid
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra015973.1-P	Field mustard	plasma membrane	84.6	94.08
CDX68215	Canola	plasma membrane	61.79	93.93
AT1G73700.1	Thale cress	plasma membrane	84.22	93.07
Bra017640.1-P	Field mustard	plasma membrane	69.39	74.34
Bra028310.1-P	Field mustard	plasma membrane	64.07	70.35
Bra028309.1-P	Field mustard	plasma membrane	64.45	70.04
Bra005432.1-P	Field mustard	plasma membrane	60.84	67.94
Bra022594.1-P	Field mustard	plasma membrane	61.79	66.74
VIT_17s0000g02970.t01	Wine grape	plasma membrane	55.89	59.63
KRH39120	Soybean	plasma membrane	54.56	58.69
VIT_17s0000g02990.t01	Wine grape	plasma membrane	54.56	58.45
KRH41776	Soybean	cytosol, peroxisome, plasma membrane	53.23	56.22
KRH39118	Soybean	endoplasmic reticulum, golgi, plasma membrane	50.38	55.91
KRH41780	Soybean	plasma membrane	50.0	55.37
PGSC0003DMT400014431	Potato	plasma membrane	51.14	54.34
Solyc03g118970.2.1	Tomato	plasma membrane	51.14	54.34
KRH39117	Soybean	golgi, plasma membrane	45.82	54.28
KRH48598	Soybean	plasma membrane	46.77	52.68
KRH48596	Soybean	plasma membrane	45.82	51.39
KRH48599	Soybean	vacuole	41.06	51.18
Bra026160.1-P	Field mustard	plasma membrane	41.06	45.09
Bra026778.1-P	Field mustard	plasma membrane	41.06	44.91
Bra016158.1-P	Field mustard	plasma membrane	41.63	44.69
Bra016671.1-P	Field mustard	plasma membrane	40.87	44.61
Bra003935.1-P	Field mustard	plasma membrane	38.78	44.25
Bra007964.1-P	Field mustard	cytosol, golgi, plasma membrane	39.92	42.51
Bra015133.1-P	Field mustard	plasma membrane	38.02	41.41
Bra013214.1-P	Field mustard	plasma membrane	37.26	41.18
Bra030999.1-P	Field mustard	plasma membrane	32.89	40.42
Bra015208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	36.5	39.83
Bra040861.1-P	Field mustard	plasma membrane	35.55	39.62
Bra004188.1-P	Field mustard	plasma membrane	34.22	38.88
Bra023720.1-P	Field mustard	plasma membrane	35.55	38.72
Bra035241.1-P	Field mustard	plasma membrane	36.69	38.6
Bra022974.1-P	Field mustard	vacuole	62.55	35.96
Bra014999.1-P	Field mustard	plasma membrane	35.17	32.69
Bra023719.1-P	Field mustard	plasma membrane	32.7	32.21
Bra015131.1-P	Field mustard	cytosol	38.59	26.68
Bra004187.1-P	Field mustard	plasma membrane	36.69	21.88

Protein Annotations

MapMan:24.2.4.1.1	EnsemblPlantsGene:Bra003832	EnsemblPlants:Bra003832.1	EnsemblPlants:Bra003832.1-P	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	UniProt:M4CHZ9	InterPro:MATE_fam	PFAM:PF01554
PANTHER:PTHR11206	PANTHER:PTHR11206:SF198	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI000254171F	SEG:seg

Description

AT1G73700 (E=1e-202) | MATE efflux family protein

Coordinates

chrA07:+:15259562..15263622

Molecular Weight (calculated)

56528.6 Da

IEP (calculated)

8.718

GRAVY (calculated)

0.612

Length

526 amino acids

Sequence
(BLAST)

001: MGDGVTPPLL ITERNTTTIR VKEEVKKQLW LSAPLIGVSL LQYSLQVISV MFVGHLGSLP LSAASIATSF ASVTGFTFLL GTASALETLC GQAYGAKLYG
101: KLGIQMQRAM FVLLLLSIPL SIIWFNTEHI LVLVHQDKSI SSVAGSYARY MIPSLFAYGL LQCINRFLQA QNNVFPVFVC SGITTCLHLL LCWLFVLKTG
201: LGYRGAALAI SVSYWFNVIL LSCYVKFSSS CSHSWTGFSK EAFHEIYDFS KIAFPSAVMV CLELWSFELL VLASGLLPNP VVETSVLSIC LNTSLTIWQI
301: SVGLGGAASI RVSNELGAGN PEVAKLAVYV IVGIAVAQGI VVVTVLLSVR KVLGRAFSSD PKIISYAASM IPIVACGNFL DGLQCVLSGV ARGCGWQKIG
401: ACVNLGSYYL VGVPLGLLLG FHFHIGGRGL WLGIVTALAV QVLCLSLVTI FTNWDKEISG DSGSATARGL GRRLLHRGSM VPHDGEIKGE GTQHEITLAA
501: FRGGGFYSPE QKATTNGWHR FSKSSY

Best Arabidopsis Sequence Match ( AT1G73700.1 )
(BLAST)

001: MEDGVTPPLL ITEKDTTMIR VKEEVKKQLW LSAPLIGVSL LQYSLQVISV MFVGHLGSLP LSAASIATSF ASVTGFTFLL GTASALETLC GQAYGAKLYG
101: KLGIQMQRAM FVLLILSVPL SIIWANTEQI LVLVHQDKSI ASVAGSYAKY MIPSLFAYGL LQCINRFLQA QNNVFPVFVC SGITTCLHLL LCWLFVLKTG
201: LGYRGAALAI SVSYWFNVIL LSCYVKFSPS CSHSWTGFSK EAFQELYDFS KIAFPSAVMV CLELWSFELL VLASGLLPNP VLETSVLSIC LNTSLTIWQI
301: SVGLGGAASI RVSNELGAGN PQVAKLAVYV IVGIAVAEGI VVVTVLLSIR KILGHAFSSD PKIIAYAASM IPIVACGNFL DGLQCVLSGV ARGCGWQKIG
401: ACVNLGSYYL VGVPLGLLLG FHFHIGGRGL WLGIVTALSV QVLCLSLVTI FTNWDKEAKK ATNRVGSSDD KDGDVQ

Arabidopsis Description

DTX17Protein DETOXIFICATION 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9U1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.