Factsheet for Bra017640.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, peroxisome, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY49289	Canola	plasma membrane	99.8	99.8
Bra015973.1-P	Field mustard	plasma membrane	73.12	75.9
Bra028309.1-P	Field mustard	plasma membrane	70.67	71.69
Bra028310.1-P	Field mustard	plasma membrane	69.86	71.61
Bra005432.1-P	Field mustard	plasma membrane	67.82	70.7
Bra003832.1-P	Field mustard	plasma membrane	74.34	69.39
Bra022594.1-P	Field mustard	plasma membrane	68.23	68.79
VIT_17s0000g02970.t01	Wine grape	plasma membrane	63.14	62.88
VIT_17s0000g02990.t01	Wine grape	plasma membrane	62.32	62.32
KRH39120	Soybean	plasma membrane	61.1	61.35
KRH41776	Soybean	cytosol, peroxisome, plasma membrane	59.67	58.84
KRH39118	Soybean	endoplasmic reticulum, golgi, plasma membrane	56.21	58.23
PGSC0003DMT400014431	Potato	plasma membrane	56.62	56.16
KRH41780	Soybean	plasma membrane	53.97	55.79
Solyc03g118970.2.1	Tomato	plasma membrane	56.21	55.76
KRH48596	Soybean	plasma membrane	52.55	55.01
KRH39117	Soybean	golgi, plasma membrane	49.08	54.28
KRH48598	Soybean	plasma membrane	49.9	52.46
KRH48599	Soybean	vacuole	44.4	51.66
Bra003935.1-P	Field mustard	plasma membrane	43.99	46.85
Bra016158.1-P	Field mustard	plasma membrane	46.64	46.73
Bra026160.1-P	Field mustard	plasma membrane	44.4	45.51
Bra007964.1-P	Field mustard	cytosol, golgi, plasma membrane	45.62	45.34
Bra026778.1-P	Field mustard	plasma membrane	42.97	43.87
Bra013214.1-P	Field mustard	plasma membrane	42.36	43.7
Bra015133.1-P	Field mustard	plasma membrane	42.57	43.27
Bra016671.1-P	Field mustard	plasma membrane	41.96	42.74
Bra030999.1-P	Field mustard	plasma membrane	36.66	42.06
Bra015208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	40.94	41.7
Bra004188.1-P	Field mustard	plasma membrane	37.88	40.17
Bra040861.1-P	Field mustard	plasma membrane	38.29	39.83
Bra035241.1-P	Field mustard	plasma membrane	39.92	39.2
Bra023720.1-P	Field mustard	plasma membrane	38.49	39.13
Bra022974.1-P	Field mustard	vacuole	67.21	36.07
Bra014999.1-P	Field mustard	plasma membrane	38.49	33.39
Bra023719.1-P	Field mustard	plasma membrane	35.44	32.58
Bra015131.1-P	Field mustard	cytosol	42.57	27.46
Bra004187.1-P	Field mustard	plasma membrane	39.92	22.22

Protein Annotations

MapMan:24.2.4.1.1	EnsemblPlantsGene:Bra017640	EnsemblPlants:Bra017640.1	EnsemblPlants:Bra017640.1-P	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	UniProt:M4DMA8	InterPro:MATE_fam	PFAM:PF01554
PANTHER:PTHR11206	PANTHER:PTHR11206:SF198	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI00025411FE	SEG:seg

Description

AT1G73700 (E=7e-169) | MATE efflux family protein

Coordinates

chrA03:+:29483907..29486183

Molecular Weight (calculated)

52804.4 Da

IEP (calculated)

7.800

GRAVY (calculated)

0.671

Length

491 amino acids

Sequence
(BLAST)

001: MEQETEKVDK EITTVSPAAQ HVVGDNSDMQ SVKEEVKKQF WLSAPLIGVS LLQYSLQVIS VMFVGHLGSL PLSAASIATS FASVTGFTFL MGTASALETL
101: CGQSYGAKMY GKLGIYMQRA MFVLLILSIP LSIIWTYTET ILVFVHQDKS IANLAGSYAQ YMIPSIFAYA LLQCLNRFLQ TQNNVFPVFV CSGITTCLHV
201: LLCWVLVLKT GLGHKGAALA ISVSYWLNVI LLSCYVKFSS CCSQTWTGFS IEALSHIPAF MKLGFPSAVM VCLELWSFEL LVLLSGLLPN PVLETSTLSI
301: CLNTSLTLWM IPVGLGGTAS TRISNELGAG NPKGAKLAVR VVVAIVIVEG IMMGSILLGV RNKLGYAFSS DPKVISYVAS MIPIVAAGNF LDGFQCVLSG
401: VARGCGWQKI GACVNLGSYY LVGAPLGLLL GFHLHLGGRG LWLGIVTALV VQVMSLSIIT LVTNWDQEAM KAKDRVGSSN NEFREAEASI I

Best Arabidopsis Sequence Match ( AT1G73700.1 )
(BLAST)

001: MEDGVTPPLL ITEKDTTMIR VKEEVKKQLW LSAPLIGVSL LQYSLQVISV MFVGHLGSLP LSAASIATSF ASVTGFTFLL GTASALETLC GQAYGAKLYG
101: KLGIQMQRAM FVLLILSVPL SIIWANTEQI LVLVHQDKSI ASVAGSYAKY MIPSLFAYGL LQCINRFLQA QNNVFPVFVC SGITTCLHLL LCWLFVLKTG
201: LGYRGAALAI SVSYWFNVIL LSCYVKFSPS CSHSWTGFSK EAFQELYDFS KIAFPSAVMV CLELWSFELL VLASGLLPNP VLETSVLSIC LNTSLTIWQI
301: SVGLGGAASI RVSNELGAGN PQVAKLAVYV IVGIAVAEGI VVVTVLLSIR KILGHAFSSD PKIIAYAASM IPIVACGNFL DGLQCVLSGV ARGCGWQKIG
401: ACVNLGSYYL VGVPLGLLLG FHFHIGGRGL WLGIVTALSV QVLCLSLVTI FTNWDKEAKK ATNRVGSSDD KDGDVQ

Arabidopsis Description

DTX17Protein DETOXIFICATION 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9U1]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.