Factsheet for Bra028310.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

nucleus 1
plasma membrane 5
extracellular 1
endoplasmic reticulum 1
vacuole 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	plasma membrane
Plant-mPloc:	plasma membrane
PProwler:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra028309.1-P	Field mustard	plasma membrane	97.29	96.28
CDY54775	Canola	plasma membrane	96.24	94.27
AT5G52450.1	Thale cress	plasma membrane	86.85	85.6
Bra022594.1-P	Field mustard	plasma membrane	84.13	82.75
Bra005432.1-P	Field mustard	plasma membrane	79.96	81.32
Bra017640.1-P	Field mustard	plasma membrane	71.61	69.86
Bra015973.1-P	Field mustard	plasma membrane	68.48	69.34
VIT_17s0000g02990.t01	Wine grape	plasma membrane	68.27	66.6
VIT_17s0000g02970.t01	Wine grape	plasma membrane	68.48	66.53
KRH39120	Soybean	plasma membrane	66.6	65.24
Bra003832.1-P	Field mustard	plasma membrane	70.35	64.07
KRH41776	Soybean	cytosol, peroxisome, plasma membrane	65.55	63.05
PGSC0003DMT400014431	Potato	plasma membrane	63.47	61.41
Solyc03g118970.2.1	Tomato	plasma membrane	62.84	60.81
KRH39118	Soybean	endoplasmic reticulum, golgi, plasma membrane	58.25	58.86
KRH39117	Soybean	golgi, plasma membrane	53.03	57.21
KRH41780	Soybean	plasma membrane	56.16	56.63
KRH48598	Soybean	plasma membrane	52.82	54.18
KRH48596	Soybean	plasma membrane	51.98	53.09
KRH48599	Soybean	vacuole	46.14	52.37
Bra026778.1-P	Field mustard	plasma membrane	46.76	46.57
Bra016671.1-P	Field mustard	plasma membrane	46.35	46.06
Bra026160.1-P	Field mustard	plasma membrane	45.93	45.93
Bra016158.1-P	Field mustard	plasma membrane	45.51	44.49
Bra003935.1-P	Field mustard	plasma membrane	42.38	44.03
Bra015133.1-P	Field mustard	plasma membrane	43.84	43.48
Bra007964.1-P	Field mustard	cytosol, golgi, plasma membrane	44.05	42.71
Bra013214.1-P	Field mustard	plasma membrane	42.17	42.44
Bra015208.1-P	Field mustard	cytosol, peroxisome, plasma membrane	41.75	41.49
Bra022974.1-P	Field mustard	vacuole	79.12	41.42
Bra030999.1-P	Field mustard	plasma membrane	36.95	41.36
Bra004188.1-P	Field mustard	plasma membrane	39.87	41.25
Bra040861.1-P	Field mustard	plasma membrane	39.87	40.47
Bra023720.1-P	Field mustard	plasma membrane	39.25	38.92
Bra035241.1-P	Field mustard	plasma membrane	39.67	38.0
Bra023719.1-P	Field mustard	plasma membrane	37.16	33.33
Bra014999.1-P	Field mustard	plasma membrane	39.25	33.22
Bra015131.1-P	Field mustard	cytosol	41.54	26.15
Bra004187.1-P	Field mustard	plasma membrane	40.29	21.88

Protein Annotations

MapMan:24.2.4.1.1	EnsemblPlantsGene:Bra028310	EnsemblPlants:Bra028310.1	EnsemblPlants:Bra028310.1-P	GO:GO:0003674	GO:GO:0005215
GO:GO:0005575	GO:GO:0006810	GO:GO:0006855	GO:GO:0008150	GO:GO:0015238	GO:GO:0015297
GO:GO:0016020	GO:GO:0016021	GO:GO:0055085	UniProt:M4EHP5	InterPro:MATE_fam	PFAM:PF01554
PANTHER:PTHR11206	PANTHER:PTHR11206:SF198	TIGRFAMs:TIGR00797	TMHMM:TMhelix	UniParc:UPI00025439BD	SEG:seg

Description

AT5G52450 (E=1e-205) | MATE efflux protein-related

Coordinates

chrA01:+:18726767..18729459

Molecular Weight (calculated)

51921.0 Da

IEP (calculated)

8.201

GRAVY (calculated)

0.824

Length

479 amino acids

Sequence
(BLAST)

001: MREERETGNN VLSWPLIGEK EKKSSVKEEV KKQLWLSGPL IGVSLLQFCL QVISVMFVGH LGSLPLSAAS IATSFASVTG FSFLMGTASA LDTLCGQSFG
101: AKMYGMLGIQ MQRAMFVLTL LSVPISIIWF NTEHLLLFVG QDKSIATLAG SYARFMIPSI FAYGLLQCFN RFLQAQNNVF PVVICSGITT CLHVLLCWVL
201: VLKSGLGFKG AAVANTISYW LNVVLLFCYV KLSPSCSLTW TGFSKEALHD ILPFMRLAIP SALMVCLEMW SFELLVLLSG LLPNPVLETS VLSICLNTAG
301: TVWMIPFGLS GAASTRVSNE LGAGNPRVAK LAVRVVICIA IAESIVIGLV LILIRNIWGM AYSSEPEVVT YVASLMPILA LGNFLDSLQC VLSGVARGCG
401: WQKIGAFINL GSYYFVGVPS GLLLGFHFHV GGRGLWLGII CALVVQVICL SLVTVFTNWD EEVRKKLCCS LTVLPITNI

Best Arabidopsis Sequence Match ( AT5G52450.1 )
(BLAST)

001: MRDDRERGEG DLSWPLIGEK SSVKEEVKKQ LWLSGPLIAV SLLQFCLQVI SVMFVGHLGS LPLSAASIAT SFASVTGFSF LMGTASALDT LCGQAYGAKK
101: YGMLGIQMQR AMFVLTLASI PLSIIWANTE HLLVFFGQNK SIATLAGSYA KFMIPSIFAY GLLQCFNRFL QAQNNVFPVV FCSGVTTSLH VLLCWVLVFK
201: SGLGFQGAAL ANSISYWLNV VLLFCYVKFS PSCSLTWTGF SKEALRDILP FLRLAVPSAL MVCLEMWSFE LLVLLSGLLP NPVLETSVLS ICLNTSGTMW
301: MIPFGLSGAA STRISNELGA GNPKVAKLAV RVVICIAVAE SIVIGSVLIL IRNIWGLAYS SELEVVSYVA SMMPILALGN FLDSLQCVLS GVARGCGWQK
401: IGAIINLGSY YLVGVPSGLL LAFHFHVGGR GLWLGIICAL VVQVFGLGLV TIFTNWDEEA KKATNRIESS SSVKDFAVDD RSVVVF

Arabidopsis Description

DTX16Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178UMN3]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.