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Tomato
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Tomato
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • extracellular 1
  • golgi 1
  • endoplasmic reticulum 1
  • vacuole 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, peroxisome, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
PGSC0003DMT400014431 Potato plasma membrane 95.15 95.15
VIT_17s0000g02970.t01 Wine grape plasma membrane 69.9 70.18
VIT_17s0000g02990.t01 Wine grape plasma membrane 69.09 69.65
KRH41776 Soybean cytosol, peroxisome, plasma membrane 67.68 67.27
KRH39120 Soybean plasma membrane 65.66 66.46
AT5G52450.1 Thale cress plasma membrane 63.23 64.4
Bra028309.1-P Field mustard plasma membrane 61.82 63.22
CDY00530 Canola plasma membrane 61.82 63.22
Bra028310.1-P Field mustard plasma membrane 60.81 62.84
CDY54775 Canola plasma membrane 61.62 62.37
Bra005432.1-P Field mustard plasma membrane 58.79 61.78
Solyc07g006730.2.1 Tomato plasma membrane 61.01 61.76
CDX84324 Canola plasma membrane 60.2 61.57
CDX79559 Canola plasma membrane 59.8 60.78
KRH39118 Soybean endoplasmic reticulum, golgi, plasma membrane 57.98 60.55
CDX91652 Canola plasma membrane 59.39 60.49
Solyc04g007540.1.1 Tomato plasma membrane 58.38 60.21
KRH41780 Soybean plasma membrane 57.58 60.0
Bra022594.1-P Field mustard plasma membrane 58.79 59.75
CDY27066 Canola plasma membrane 58.79 59.75
AT2G34360.1 Thale cress plasma membrane 57.17 58.96
CDY17238 Canola plasma membrane 60.2 58.55
Solyc07g006740.2.1 Tomato plasma membrane 55.56 58.39
CDX73002 Canola plasma membrane 47.07 58.25
CDY68867 Canola plasma membrane 54.75 57.91
AT1G73700.1 Thale cress plasma membrane 55.15 57.35
Bra015973.1-P Field mustard plasma membrane 54.55 57.08
CDY60134 Canola plasma membrane 54.55 57.08
CDX72467 Canola plasma membrane 55.76 56.33
CDY49289 Canola plasma membrane 55.76 56.21
Bra017640.1-P Field mustard plasma membrane 55.76 56.21
CDX68215 Canola plasma membrane 38.99 55.78
KRH48596 Soybean plasma membrane 52.73 55.65
KRH39117 Soybean golgi, plasma membrane 49.49 55.18
KRH48598 Soybean plasma membrane 50.51 53.53
Solyc03g112250.1.1 Tomato nucleus, peroxisome, plasma membrane 52.53 53.17
Bra003832.1-P Field mustard plasma membrane 54.34 51.14
KRH48599 Soybean vacuole 43.43 50.95
Solyc05g008510.2.1 Tomato plasma membrane 48.89 50.63
Solyc04g007530.2.1 Tomato plasma membrane 46.26 47.61
Solyc05g008500.1.1 Tomato plasma membrane 43.43 47.15
Solyc02g063270.2.1 Tomato plasma membrane 43.23 47.14
Solyc03g112260.2.1 Tomato plasma membrane 49.29 47.01
Solyc02g091070.2.1 Tomato plasma membrane 44.44 46.71
Solyc02g091050.2.1 Tomato plasma membrane 44.04 45.99
Solyc03g034400.2.1 Tomato cytosol, plasma membrane, vacuole 43.43 45.74
Solyc02g063260.2.1 Tomato plasma membrane 44.44 44.72
Solyc10g007360.2.1 Tomato plastid 41.21 42.32
Solyc10g007100.2.1 Tomato plasma membrane 40.61 41.19
Solyc02g091080.1.1 Tomato golgi, peroxisome, plasma membrane 40.61 39.65
Solyc10g007380.1.1 Tomato plastid 40.2 38.87
Solyc10g007370.1.1 Tomato plasma membrane, plastid 40.61 36.75
Bra022974.1-P Field mustard vacuole 58.79 31.8
CDX84649 Canola vacuole 60.0 30.62
Protein Annotations
MapMan:24.2.4.1.1GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855
GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085
UniProt:K4BM46InterPro:MATE_famPFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF198EnsemblPlantsGene:Solyc03g118970.2
EnsemblPlants:Solyc03g118970.2.1TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI00027661B5::
Description
Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:K4BM46]
Coordinates
chr3:-:67712885..67715799
Molecular Weight (calculated)
54012.5 Da
IEP (calculated)
7.666
GRAVY (calculated)
0.691
Length
495 amino acids
Sequence
(BLAST)
001: MEAEYGKSSS VKTPLIDDRE KQSILDGERK NGGGFSKEEI VEEVKRQVWL AGPLVSVNLL QFSLQLIAIM FVGHLGELPL SGASMANSFT SVTGISLLMG
101: MSSALDTFCG QSYGAKQYHM LGIHMQRAMI ILSLVSIPLA VIWANTGHIL KFLGQDPSIS DEAGHYALYF IPGVFAYGLL QCVVRFLQTQ SIVIPMVLCA
201: GVTTLIHIVV CWVLVFKTGL GVKGAALANS ISYWLNFLFL AIYIKFSPSC VKTWTGLSKE ALKDMLTFIK LAVPSAIMVC LEMWSFELMV LLSGLLPNPQ
301: LETSVLSICL NTAATVWMIP FGLSGAVSTR VSNELGAAHP QLARLALYVV LTVAVMEGLV LGLVMILIRK VWGYAYSNET EVVRYIAIMM PLLATSNFLD
401: GLQCVLSGAV RGFGWQKIGA IINLGSYYLV GIPCAVLLAF YLRIGGKGLW LGIICALLVQ VLSLLFITIR TNWEAEAKKA QERVEETTLP VEIVY
Best Arabidopsis Sequence Match ( AT5G52450.1 )
(BLAST)
001: MRDDRERGEG DLSWPLIGEK SSVKEEVKKQ LWLSGPLIAV SLLQFCLQVI SVMFVGHLGS LPLSAASIAT SFASVTGFSF LMGTASALDT LCGQAYGAKK
101: YGMLGIQMQR AMFVLTLASI PLSIIWANTE HLLVFFGQNK SIATLAGSYA KFMIPSIFAY GLLQCFNRFL QAQNNVFPVV FCSGVTTSLH VLLCWVLVFK
201: SGLGFQGAAL ANSISYWLNV VLLFCYVKFS PSCSLTWTGF SKEALRDILP FLRLAVPSAL MVCLEMWSFE LLVLLSGLLP NPVLETSVLS ICLNTSGTMW
301: MIPFGLSGAA STRISNELGA GNPKVAKLAV RVVICIAVAE SIVIGSVLIL IRNIWGLAYS SELEVVSYVA SMMPILALGN FLDSLQCVLS GVARGCGWQK
401: IGAIINLGSY YLVGVPSGLL LAFHFHVGGR GLWLGIICAL VVQVFGLGLV TIFTNWDEEA KKATNRIESS SSVKDFAVDD RSVVVF
Arabidopsis Description
DTX16Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178UMN3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.