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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 5
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, secretory
BaCelLo:nucleus
MultiLoc:plasma membrane
Plant-mPloc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra028309.1-P Field mustard plasma membrane 100.0 100.0
CDY54775 Canola plasma membrane 97.73 96.73
AT5G52450.1 Thale cress plasma membrane 88.02 87.65
CDY27066 Canola plasma membrane 84.92 84.39
CDX91652 Canola plasma membrane 84.71 84.36
CDX84324 Canola plasma membrane 80.58 80.58
CDX79559 Canola plasma membrane 79.75 79.26
CDY17238 Canola plasma membrane 81.41 77.41
CDY68867 Canola plasma membrane 69.21 71.58
CDY49289 Canola plasma membrane 71.9 70.88
CDY60134 Canola plasma membrane 69.01 70.61
CDX73002 Canola plasma membrane 57.85 70.0
CDX72467 Canola plasma membrane 70.45 69.59
CDX68215 Canola plasma membrane 49.38 69.08
VIT_17s0000g02990.t01 Wine grape plasma membrane 68.59 67.62
VIT_17s0000g02970.t01 Wine grape plasma membrane 68.8 67.55
KRH39120 Soybean plasma membrane 67.15 66.46
KRH41776 Soybean cytosol, peroxisome, plasma membrane 65.7 63.86
PGSC0003DMT400014431 Potato plasma membrane 63.84 62.42
Solyc03g118970.2.1 Tomato plasma membrane 63.22 61.82
KRH39118 Soybean endoplasmic reticulum, golgi, plasma membrane 58.26 59.49
KRH41780 Soybean plasma membrane 56.41 57.47
KRH39117 Soybean golgi, plasma membrane 52.48 57.21
KRH48598 Soybean plasma membrane 53.72 55.67
KRH48596 Soybean plasma membrane 52.48 54.16
KRH48599 Soybean vacuole 46.49 53.32
CDY71492 Canola plasma membrane 42.98 47.93
CDX81701 Canola plasma membrane 47.52 47.92
CDY39617 Canola plasma membrane 46.49 46.88
CDY52017 Canola plasma membrane 46.28 46.67
CDY36531 Canola plasma membrane 46.28 46.67
CDY72127 Canola plasma membrane 30.37 46.23
CDX83993 Canola plasma membrane 40.91 45.21
CDY65688 Canola plasma membrane 35.54 45.14
CDX72778 Canola plasma membrane 45.25 44.6
CDX96304 Canola plasma membrane 45.04 44.58
CDY21736 Canola plasma membrane 43.39 44.12
CDY27886 Canola plasma membrane 44.01 44.1
CDY50254 Canola plasma membrane 44.01 44.1
CDY72452 Canola cytosol, extracellular, mitochondrion 8.47 44.09
CDX81843 Canola plasma membrane 42.98 43.7
CDY67968 Canola plasma membrane 43.59 43.59
CDY15087 Canola plasma membrane 42.77 43.49
CDX68324 Canola plasma membrane 43.59 43.33
CDY49220 Canola plasma membrane 43.39 43.12
CDY17027 Canola plasma membrane 35.12 42.5
CDX87974 Canola cytosol, peroxisome, plasma membrane 41.53 42.49
CDY12351 Canola cytosol, peroxisome, plasma membrane 41.53 41.7
CDY36231 Canola plasma membrane 38.84 41.32
CDX96130 Canola plasma membrane 39.88 40.89
CDX77471 Canola plasma membrane 33.26 40.76
CDY09031 Canola plasma membrane 39.88 40.63
CDY18116 Canola plasma membrane 40.08 40.25
CDX84649 Canola vacuole 80.37 40.1
CDY36229 Canola plasma membrane 40.08 39.27
CDX86801 Canola plasma membrane 40.08 38.72
CDY18118 Canola plasma membrane 35.74 38.44
CDY13241 Canola plasma membrane 40.08 38.42
CDY50255 Canola cytosol, peroxisome, vacuole 18.59 37.66
CDX96129 Canola plasma membrane 40.29 37.64
CDY71754 Canola plasma membrane 20.45 37.5
CDY36230 Canola plasma membrane 39.46 35.63
CDY18117 Canola cytosol, extracellular, plasma membrane 1.86 25.71
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078EEP8EnsemblPlants:CDY00530ProteinID:CDY00530ProteinID:CDY00530.1GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238
GO:GO:0015297GO:GO:0016020GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00110268001InterPro:MATE_famPFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF198TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI00025439BESEG:seg
Description
BnaA10g07430D
Coordinates
chrLK031919:-:1116233..1119471
Molecular Weight (calculated)
52347.2 Da
IEP (calculated)
8.162
GRAVY (calculated)
0.737
Length
484 amino acids
Sequence
(BLAST)
001: MREERETGNN VLSWPLIGEK EKKSSVKEEV KKQLWLSGPL IGVSLLQFCL QVISVMFVGH LGSLPLSAAS IATSFASVTG FSFLMGTASA LDTLCGQSFG
101: AKMYGMLGIQ MQRAMFVLTL LSVPISIIWF NTEHLLLFVG QDKSIATLAG SYARFMIPSI FAYGLLQCFN RFLQAQNNVF PVVICSGITT CLHVLLCWVL
201: VLKSGLGFKG AAVANTISYW LNVVLLFCYV KLSPSCSLTW TGFSKEALHD ILPFMRLAIP SALMVCLEMW SFELLVLLSG LLPNPVLETS VLSICLNTAG
301: TVWMIPFGLS GAASTRVSNE LGAGNPRVAK LAVRVVICIA IAESIVIGLV LILIRNIWGM AYSSEPEVVT YVASLMPILA LGNFLDSLQC VLSGVARGCG
401: WQKIGAFINL GSYYFVGVPS GLLLGFHFHV GGRGLWLGII CALVVQVICL SLVTVFTNWD EEAKKATKRV ESSSGVRDAP PMDP
Best Arabidopsis Sequence Match ( AT5G52450.1 )
(BLAST)
001: MRDDRERGEG DLSWPLIGEK SSVKEEVKKQ LWLSGPLIAV SLLQFCLQVI SVMFVGHLGS LPLSAASIAT SFASVTGFSF LMGTASALDT LCGQAYGAKK
101: YGMLGIQMQR AMFVLTLASI PLSIIWANTE HLLVFFGQNK SIATLAGSYA KFMIPSIFAY GLLQCFNRFL QAQNNVFPVV FCSGVTTSLH VLLCWVLVFK
201: SGLGFQGAAL ANSISYWLNV VLLFCYVKFS PSCSLTWTGF SKEALRDILP FLRLAVPSAL MVCLEMWSFE LLVLLSGLLP NPVLETSVLS ICLNTSGTMW
301: MIPFGLSGAA STRISNELGA GNPKVAKLAV RVVICIAVAE SIVIGSVLIL IRNIWGLAYS SELEVVSYVA SMMPILALGN FLDSLQCVLS GVARGCGWQK
401: IGAIINLGSY YLVGVPSGLL LAFHFHVGGR GLWLGIICAL VVQVFGLGLV TIFTNWDEEA KKATNRIESS SSVKDFAVDD RSVVVF
Arabidopsis Description
DTX16Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178UMN3]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.