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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • nucleus 1
  • plasma membrane 4
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • golgi 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:nucleus, plasma membrane
BaCelLo:nucleus
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra026778.1-P Field mustard plasma membrane 99.31 89.61
CDX81701 Canola plasma membrane 95.85 86.67
CDY39617 Canola plasma membrane 88.94 80.42
CDY36531 Canola plasma membrane 88.71 80.21
CDY52017 Canola plasma membrane 83.41 75.42
CDX83993 Canola plasma membrane 75.58 74.89
AT1G15170.1 Thale cress plasma membrane 81.8 73.8
AT1G15180.1 Thale cress plasma membrane 81.8 73.65
AT1G15150.1 Thale cress plasma membrane 79.03 70.43
AT1G15160.1 Thale cress plasma membrane 78.11 69.61
VIT_01s0011g04450.t01 Wine grape cytosol, golgi, plasma membrane 59.45 53.64
KRH35829 Soybean golgi, nucleus, vacuole 58.76 53.46
KRG90944 Soybean plasma membrane 58.06 52.94
KRH35832 Soybean plasma membrane 57.83 52.84
KRH35828 Soybean plasma membrane 58.06 52.72
CDY72127 Canola plasma membrane 38.02 51.89
VIT_01s0011g04430.t01 Wine grape plasma membrane 57.14 51.56
KRH53068 Soybean plasma membrane 56.91 51.46
PGSC0003DMT400078374 Potato plasma membrane 50.23 51.05
Solyc05g008510.2.1 Tomato plasma membrane 55.99 50.84
PGSC0003DMT400078371 Potato plasma membrane 52.3 50.0
PGSC0003DMT400015301 Potato plasma membrane 54.61 49.07
Os05t0554000-01 Rice cytosol, peroxisome, plasma membrane 46.08 49.02
Solyc04g007530.2.1 Tomato plasma membrane 54.15 48.86
GSMUA_Achr3P29080_001 Banana plasma membrane 49.54 48.53
GSMUA_Achr4P03730_001 Banana endoplasmic reticulum, plasma membrane, vacuole 48.16 47.18
TraesCS3A01G229400.1 Wheat plasma membrane 43.32 47.12
CDY67968 Canola plasma membrane 51.61 46.28
Zm00001d009494_P001 Maize plasma membrane 50.0 46.27
CDX72778 Canola plasma membrane 52.3 46.23
CDY71754 Canola plasma membrane 28.11 46.21
CDX96304 Canola plasma membrane 51.84 46.01
CDX68324 Canola plasma membrane 51.61 46.0
Solyc05g008500.1.1 Tomato plasma membrane 48.16 45.83
CDY49220 Canola plasma membrane 51.38 45.79
CDY27886 Canola plasma membrane 50.46 45.34
CDY50254 Canola plasma membrane 50.46 45.34
TraesCS3D01G227600.2 Wheat plasma membrane 49.77 45.19
TraesCS3B01G255200.2 Wheat plasma membrane 49.77 45.19
Zm00001d043838_P002 Maize plasma membrane 50.69 45.17
TraesCSU01G003900.1 Wheat cytosol, plasma membrane, vacuole 51.38 45.14
TraesCS3D01G265400.1 Wheat plasma membrane 50.23 45.13
TraesCS1D01G388600.1 Wheat plasma membrane 51.15 45.12
TraesCS1A01G380900.1 Wheat plasma membrane 51.15 45.03
TraesCS3B01G298700.1 Wheat cytosol, plasma membrane, vacuole 50.0 44.93
TraesCS3A01G265100.1 Wheat plasma membrane 50.0 44.93
CDX77471 Canola plasma membrane 40.78 44.81
CDY50255 Canola cytosol, peroxisome, vacuole 24.65 44.77
CDX81843 Canola plasma membrane 49.08 44.75
CDY21736 Canola plasma membrane 48.85 44.54
EES03448 Sorghum plasma membrane 50.0 44.38
HORVU1Hr1G084190.9 Barley mitochondrion, peroxisome, plasma membrane 50.69 44.35
TraesCS2D01G214300.1 Wheat plasma membrane 49.31 44.03
OQU78400 Sorghum cytosol, plasma membrane, vacuole 50.69 44.0
TraesCS2B01G229100.1 Wheat plasma membrane 49.08 43.83
Os01t0684900-01 Rice plasma membrane 49.54 43.79
TraesCS1B01G016700.1 Wheat plasma membrane 33.41 43.41
CDY00530 Canola plasma membrane 47.93 42.98
CDY54775 Canola plasma membrane 48.39 42.94
CDY15087 Canola plasma membrane 47.0 42.86
CDX84324 Canola plasma membrane 47.47 42.56
Zm00001d027921_P002 Maize plasma membrane 48.39 42.34
HORVU2Hr1G039850.10 Barley peroxisome, plasma membrane, plastid 49.08 42.26
CDX73002 Canola plasma membrane 38.94 42.25
Os01t0504500-02 Rice plasma membrane 48.85 42.23
TraesCS2A01G202000.1 Wheat plasma membrane 49.77 42.19
CDX91652 Canola plasma membrane 47.0 41.98
CDX79559 Canola plasma membrane 46.77 41.68
CDY27066 Canola plasma membrane 46.77 41.68
CDY68867 Canola plasma membrane 44.93 41.67
CDX87974 Canola cytosol, peroxisome, plasma membrane 45.39 41.65
CDY36231 Canola plasma membrane 43.32 41.32
CDY60134 Canola plasma membrane 44.7 41.01
CDX86801 Canola plasma membrane 47.0 40.72
CDY36229 Canola plasma membrane 46.31 40.69
CDX96130 Canola plasma membrane 44.24 40.68
CDY17238 Canola plasma membrane 47.7 40.67
CDY12351 Canola cytosol, peroxisome, plasma membrane 45.16 40.66
CDY13241 Canola plasma membrane 47.0 40.4
CDY49289 Canola plasma membrane 45.62 40.33
TraesCS1D01G009800.1 Wheat plasma membrane 46.54 40.32
EER95390 Sorghum plasma membrane 46.54 40.0
CDX72467 Canola plasma membrane 44.93 39.8
CDX68215 Canola plasma membrane 30.88 38.73
CDX96129 Canola plasma membrane 45.85 38.42
CDY65688 Canola plasma membrane 32.49 37.01
CDY36230 Canola plasma membrane 45.16 36.57
CDY09031 Canola plasma membrane 37.33 34.11
CDY18116 Canola plasma membrane 37.56 33.82
CDY17027 Canola plasma membrane 30.88 33.5
CDY18118 Canola plasma membrane 34.1 32.89
HORVU3Hr1G063430.3 Barley plastid 32.03 24.73
CDY72452 Canola cytosol, extracellular, mitochondrion 5.3 24.73
CDX84649 Canola vacuole 46.31 20.72
CDY18117 Canola cytosol, extracellular, plasma membrane 1.15 14.29
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078K0R7UniProt:A0A078K0R7EnsemblPlants:CDY71492ProteinID:CDY71492ProteinID:CDY71492.1
GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150
GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00016567001
InterPro:MATE_famPFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF87TIGRFAMs:TIGR00797TMHMM:TMhelix
UniParc:UPI0004EE333FSEG:seg::::
Description
BnaAnng37660DBnaAnng37660D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078K0R7]
Coordinates
chrLK046073:-:1..1977
Molecular Weight (calculated)
47444.4 Da
IEP (calculated)
6.492
GRAVY (calculated)
0.715
Length
434 amino acids
Sequence
(BLAST)
001: MENSINDSLL LPVDRVEKET WRDQREGSYT EELKRIIFFA APMAAVVIAQ FTLQIISMVM VGHLGNLALA SASLASSFCN VTGFSFIIGL SCALDTLSGQ
101: AYGAKLYKKL SVQTYTAMFC LTLVCFPLSI IWFNMEKLLI FLGQDHAIAH EAGRYAAWLI PGLFSYAVLQ PLTRYFQNQS MIRPLLITSS CVFCLHVPLC
201: WLLVYKSGLG FLGGALAMGL SNWLYAILLG SIMFFSSACS ETRAPLSMEI FNGVGEFFRY ALPSAAMVCL EWWSYELMIL LSGLLPNPEL ETSVLSVCLQ
301: TISTIYSIPL AIAAAASTRI SNELGAGNYR AAHIVVYAAT SFALMESVVV SLSLLLARNV FGYVFSSDKA TVDYVAKMAP LVSITIILDS LQGVLSAGIA
401: RGCGWQHIGA YINLGSFYLW GIPFAATLAF WVNL
Best Arabidopsis Sequence Match ( AT1G15170.1 )
(BLAST)
001: MGDAESTKDR LLLPVERVEN VTWSDLRDGS FTVELKRLIF FAAPMAAVVI AQFMLQIVSM MMVGHLGNLS LASASLASSF CNVTGFSFII GLSCALDTLS
101: GQAYGAKLYR KLGVQTYTAM FCLALVCLPL SLIWFNMEKL LLILGQDPSI AHEAGKYATW LIPGLFAYAV LQPLTRYFQN QSLITPLLIT SYVVFCIHVP
201: LCWFLVYNSG LGNLGGALAI SLSNWLYAIF LGSFMYYSSA CSETRAPLSM EIFDGIGEFF KYALPSAAMI CLEWWSYELI ILLSGLLPNP QLETSVLSVC
301: LQTISTMYSI PLAIAAAAST RISNELGAGN SRAAHIVVYA AMSLAVIDAL IVSMSLLIGR NLFGHIFSSD KETIDYVAKM APLVSISLML DALQGVLSGI
401: ARGCGWQHIG AYINLGAFYL WGIPIAASLA FWIHLKGVGL WIGIQAGAVL QTLLLALVTG CTNWESQADK ARNRMALAYG T
Arabidopsis Description
DTX12Protein DETOXIFICATION [Source:UniProtKB/TrEMBL;Acc:A0A178WNL0]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.