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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: cytosol, plasma membrane, vacuole

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • golgi 1
  • plasma membrane 2
  • endoplasmic reticulum 1
  • vacuole 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, plasma membrane, vacuole
Any Predictor:cytosol, nucleus, secretory
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d009494_P001 Maize plasma membrane 88.8 94.67
TraesCSU01G003900.1 Wheat cytosol, plasma membrane, vacuole 78.4 79.35
TraesCS1A01G380900.1 Wheat plasma membrane 77.8 78.9
TraesCS1D01G388600.1 Wheat plasma membrane 77.6 78.86
Os05t0554000-01 Rice cytosol, peroxisome, plasma membrane 63.6 77.94
HORVU1Hr1G084190.9 Barley mitochondrion, peroxisome, plasma membrane 76.4 77.02
EES03448 Sorghum plasma membrane 65.4 66.87
GSMUA_Achr3P29080_001 Banana plasma membrane 58.8 66.37
GSMUA_Achr4P03730_001 Banana endoplasmic reticulum, plasma membrane, vacuole 56.4 63.66
PGSC0003DMT400078716 Potato extracellular, plasma membrane, vacuole 49.6 57.67
VIT_01s0011g04450.t01 Wine grape cytosol, golgi, plasma membrane 54.8 56.96
KRH35832 Soybean plasma membrane 53.2 56.0
PGSC0003DMT400078374 Potato plasma membrane 47.6 55.74
Solyc02g091070.2.1 Tomato plasma membrane 52.2 55.41
KRH70431 Soybean plasma membrane 52.2 54.95
PGSC0003DMT400078715 Potato plasma membrane 52.0 54.85
Solyc02g091050.2.1 Tomato plasma membrane 52.0 54.85
KRH35828 Soybean plasma membrane 52.4 54.81
KRG90944 Soybean plasma membrane 52.0 54.62
CDY72127 Canola plasma membrane 34.6 54.4
VIT_14s0006g02260.t01 Wine grape plasma membrane 53.6 54.25
Solyc05g008510.2.1 Tomato plasma membrane 51.6 53.97
PGSC0003DMT400078371 Potato plasma membrane 48.8 53.74
KRH35829 Soybean golgi, nucleus, vacuole 51.2 53.67
KRH01698 Soybean plasma membrane 51.4 53.54
KRH56353 Soybean plasma membrane 51.4 53.54
PGSC0003DMT400043016 Potato cytosol, plasma membrane, vacuole 50.2 53.52
KRH01699 Soybean plasma membrane 43.4 53.45
VIT_01s0011g04430.t01 Wine grape plasma membrane 51.4 53.43
PGSC0003DMT400015301 Potato plasma membrane 51.6 53.42
KRH53068 Soybean plasma membrane 51.2 53.33
Solyc02g063270.2.1 Tomato plasma membrane 48.4 53.3
Solyc04g007530.2.1 Tomato plasma membrane 51.2 53.22
Solyc03g034400.2.1 Tomato cytosol, plasma membrane, vacuole 50.0 53.19
KRH56518 Soybean plasma membrane 51.0 52.47
KRG90943 Soybean plasma membrane 42.8 52.32
Bra003935.1-P Field mustard plasma membrane 48.0 52.06
KRG93178 Soybean plasma membrane 51.8 52.01
CDX96304 Canola plasma membrane 50.8 51.94
CDX72778 Canola plasma membrane 51.0 51.93
Bra016158.1-P Field mustard plasma membrane 50.8 51.84
PGSC0003DMT400026959 Potato cytosol, plasma membrane, vacuole 49.6 51.67
CDY67968 Canola plasma membrane 49.6 51.24
CDX68324 Canola plasma membrane 49.6 50.92
AT1G71140.1 Thale cress plasma membrane 49.2 50.72
CDY49220 Canola plasma membrane 49.4 50.72
CDY71492 Canola plasma membrane 44.0 50.69
EER95390 Sorghum plasma membrane 50.8 50.3
KRH70422 Soybean plasma membrane 48.2 50.0
Solyc05g008500.1.1 Tomato plasma membrane 45.6 50.0
Solyc02g063260.2.1 Tomato plasma membrane 48.8 49.59
KRH70420 Soybean plasma membrane 47.2 49.58
CDX81701 Canola plasma membrane 47.4 49.38
AT1G15150.1 Thale cress plasma membrane 48.0 49.28
CDY27886 Canola plasma membrane 47.6 49.28
CDY50254 Canola plasma membrane 47.6 49.28
KRH35833 Soybean plasma membrane 45.2 49.24
Bra007964.1-P Field mustard cytosol, golgi, plasma membrane 48.6 49.19
CDY52017 Canola plasma membrane 47.2 49.17
Bra015133.1-P Field mustard plasma membrane 47.4 49.07
AT1G15170.1 Thale cress plasma membrane 47.2 49.06
CDY50255 Canola cytosol, peroxisome, vacuole 23.4 48.95
Bra026160.1-P Field mustard plasma membrane 46.8 48.85
CDY36531 Canola plasma membrane 46.8 48.75
CDY39617 Canola plasma membrane 46.8 48.75
Bra026778.1-P Field mustard plasma membrane 46.8 48.65
Bra016671.1-P Field mustard plasma membrane 46.8 48.55
AT1G15160.1 Thale cress plasma membrane 47.2 48.46
CDX81843 Canola plasma membrane 46.0 48.32
CDY21736 Canola plasma membrane 46.0 48.32
CDX83993 Canola plasma membrane 42.2 48.17
KXG21780 Sorghum plasma membrane 43.2 48.0
AT2G04050.1 Thale cress plasma membrane 45.6 47.9
AT2G04100.1 Thale cress plasma membrane 46.0 47.62
AT1G15180.1 Thale cress plasma membrane 45.8 47.51
AT1G66780.1 Thale cress plasma membrane 46.0 47.42
KRH01702 Soybean plasma membrane 36.8 47.42
AT2G04090.1 Thale cress plasma membrane 44.8 46.96
KXG26020 Sorghum plasma membrane 45.0 46.88
Bra030999.1-P Field mustard plasma membrane 40.0 46.73
AT2G04080.1 Thale cress plasma membrane 44.4 46.64
Bra013214.1-P Field mustard plasma membrane 44.4 46.64
KXG19962 Sorghum plasma membrane 44.6 46.56
AT2G04040.1 Thale cress vacuole 44.2 46.43
CDY36231 Canola plasma membrane 42.2 46.37
CDY72452 Canola cytosol, extracellular, mitochondrion 8.6 46.24
CDY15087 Canola plasma membrane 43.8 46.01
Bra035241.1-P Field mustard plasma membrane 46.0 46.0
CDX96130 Canola plasma membrane 43.4 45.97
Solyc02g091080.1.1 Tomato golgi, peroxisome, plasma membrane 46.6 45.96
CDX77471 Canola plasma membrane 36.2 45.82
EES06697 Sorghum plasma membrane 44.6 45.79
CDX86801 Canola plasma membrane 45.8 45.71
AT1G66760.2 Thale cress cytosol, peroxisome, plasma membrane 44.0 45.64
CDY13241 Canola plasma membrane 46.0 45.54
CDY71754 Canola plasma membrane 24.0 45.45
EES06698 Sorghum plasma membrane 43.6 45.42
Bra004188.1-P Field mustard plasma membrane 41.8 45.14
CDX87974 Canola cytosol, peroxisome, plasma membrane 42.6 45.03
CDY36229 Canola plasma membrane 44.4 44.94
Bra015208.1-P Field mustard cytosol, peroxisome, plasma membrane 43.2 44.81
OQU77813 Sorghum plasma membrane 42.4 44.73
OQU80064 Sorghum plasma membrane 26.4 44.44
KRG90942 Soybean plasma membrane 49.2 44.32
AT1G64820.1 Thale cress plasma membrane 44.4 44.22
CDY12351 Canola cytosol, peroxisome, plasma membrane 42.6 44.19
CDX96129 Canola plasma membrane 44.4 42.86
EER90350 Sorghum plasma membrane 40.6 42.03
KXG30060 Sorghum plasma membrane 42.2 41.29
CDY36230 Canola plasma membrane 44.0 41.04
Bra014999.1-P Field mustard plasma membrane 41.8 36.93
OQU88303 Sorghum cytosol, peroxisome, plasma membrane 36.0 35.57
OQU77045 Sorghum plastid 28.8 35.04
Bra015131.1-P Field mustard cytosol 46.4 30.49
EER99421 Sorghum plasma membrane 35.4 29.9
Bra004187.1-P Field mustard plasma membrane 44.2 25.06
Protein Annotations
MapMan:24.2.4.1.1UniProt:A0A1Z5R3V4GO:GO:0003674GO:GO:0005215GO:GO:0005575GO:GO:0006810
GO:GO:0006855GO:GO:0008150GO:GO:0015238GO:GO:0015297GO:GO:0016020GO:GO:0016021
GO:GO:0055085InterPro:MATE_famEnsemblPlants:OQU78400ProteinID:OQU78400ProteinID:OQU78400.1PFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF139EnsemblPlantsGene:SORBI_3009G224800TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI000B426ACB
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr9:+:56688132..56691971
Molecular Weight (calculated)
54027.9 Da
IEP (calculated)
7.289
GRAVY (calculated)
0.610
Length
500 amino acids
Sequence
(BLAST)
001: MEERVPLLPQ YTLRNDDGRE EKCGGGGGVR WWRELLAREA GKVGCVALPM AAVSVSQYAV QVASNMMVGH LPGVLPLSAS AIATSLATVS GFSLLIGMAS
101: GLETLCGQAY GAKQYDKLGM HTYRAIVTLI VVSIPISLLW AFIGKLLMLI GQDPLISKEA GRYIAWLIPG LFAYAISQPL TKFLQSQSLI IPMLWSSIAT
201: LLLHIPICWL LVFKTSLGYI GASLAISLSY WLNVIMLAAY IRYSNSCKET RSPPTVEAFK GVGVFLRLAL PSALMLCFEW WSFEILILVS GILPNPELQT
301: SVLSICLTTI TLMYTIPYGL GAAASTRVAN ELGGGNPEGA RSSVQVVMCI AVMEAVIITI ILLASQHILG YAYSSDKDVV AYVNAMVPFV CVSVAADSLQ
401: GVLSGIARGC GWQHLGAYVN LGSFYLVGIP TALFLGFVLK MEAKGLWMGI SCGSIVQFLL LAIITFFSNW QKMSEKARER VFSDEPSDKE PLESDGSNLF
Best Arabidopsis Sequence Match ( AT1G71140.1 )
(BLAST)
001: MDSAEKGLLV VSDREEVNKK DGFLRETKKL SYIAGPMIAV NSSMYVLQVI SIMMVGHLGE LFLSSTAIAV SFCSVTGFSV VFGLASALET LCGQANGAKQ
101: YEKLGVHTYT GIVSLFLVCI PLSLLWTYIG DILSLIGQDA MVAQEAGKFA TWLIPALFGY ATLQPLVRFF QAQSLILPLV MSSVSSLCIH IVLCWSLVFK
201: FGLGSLGAAI AIGVSYWLNV TVLGLYMTFS SSCSKSRATI SMSLFEGMGE FFRFGIPSAS MICLEWWSFE FLVLLSGILP NPKLEASVLS VCLSTQSSLY
301: QIPESLGAAA STRVANELGA GNPKQARMAV YTAMVITGVE SIMVGAIVFG ARNVFGYLFS SETEVVDYVK SMAPLLSLSV IFDALHAALS GVARGSGRQD
401: IGAYVNLAAY YLFGIPTAIL LAFGFKMRGR GLWIGITVGS CVQAVLLGLI VILTNWKKQA RKARERVMGD EYEEKESEEE HEYIS
Arabidopsis Description
DTX14Protein DETOXIFICATION 14 [Source:UniProtKB/Swiss-Prot;Acc:Q9C994]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.