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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, cytosol, plasma membrane

Predictor Summary:
  • nucleus 1
  • cytosol 1
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 2
  • golgi 1
  • peroxisome 1
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, peroxisome, plasma membrane
Any Predictor:cytosol, nucleus, peroxisome, plasma membrane
BaCelLo:nucleus
MultiLoc:cytosol
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY12351 Canola cytosol, peroxisome, plasma membrane 99.37 97.51
Bra015208.1-P Field mustard cytosol, peroxisome, plasma membrane 98.73 96.89
AT1G66760.2 Thale cress cytosol, peroxisome, plasma membrane 86.05 84.44
CDY36231 Canola plasma membrane 63.21 65.71
CDX86801 Canola plasma membrane 55.39 52.3
KRH01699 Soybean plasma membrane 44.61 51.97
CDX96130 Canola plasma membrane 51.8 51.91
CDY13241 Canola plasma membrane 55.39 51.88
KRH70420 Soybean plasma membrane 51.59 51.26
CDY36229 Canola plasma membrane 53.07 50.81
GSMUA_Achr3P29080_001 Banana plasma membrane 46.93 50.11
CDY72452 Canola cytosol, extracellular, mitochondrion 9.73 49.46
GSMUA_Achr4P03730_001 Banana endoplasmic reticulum, plasma membrane, vacuole 45.88 48.98
KRH56518 Soybean plasma membrane 50.32 48.97
PGSC0003DMT400026959 Potato cytosol, plasma membrane, vacuole 49.68 48.96
Solyc02g063270.2.1 Tomato plasma membrane 46.93 48.9
CDX96129 Canola plasma membrane 53.28 48.65
KRH70422 Soybean plasma membrane 49.47 48.55
Solyc02g063260.2.1 Tomato plasma membrane 50.32 48.37
PGSC0003DMT400078715 Potato plasma membrane 48.41 48.31
KRH01702 Soybean plasma membrane 39.53 48.2
CDY72127 Canola plasma membrane 32.35 48.11
KRG93178 Soybean plasma membrane 50.32 47.79
PGSC0003DMT400043016 Potato cytosol, plasma membrane, vacuole 47.36 47.76
Solyc02g091050.2.1 Tomato plasma membrane 47.78 47.68
TraesCS3A01G229400.1 Wheat plasma membrane 40.17 47.62
CDY36230 Canola plasma membrane 53.07 46.83
TraesCS3B01G255200.2 Wheat plasma membrane 47.15 46.65
TraesCS3D01G265400.1 Wheat plasma membrane 47.57 46.58
CDX81843 Canola plasma membrane 46.72 46.43
TraesCS3B01G298700.1 Wheat cytosol, plasma membrane, vacuole 47.36 46.38
TraesCS3D01G227600.2 Wheat plasma membrane 46.72 46.23
CDY21736 Canola plasma membrane 46.51 46.22
Solyc03g034400.2.1 Tomato cytosol, plasma membrane, vacuole 45.88 46.17
TraesCS3A01G265100.1 Wheat plasma membrane 47.15 46.17
CDX68324 Canola plasma membrane 47.36 46.0
CDY50254 Canola plasma membrane 46.93 45.96
CDY27886 Canola plasma membrane 46.93 45.96
TraesCS1B01G016700.1 Wheat plasma membrane 32.14 45.51
CDY67968 Canola plasma membrane 46.51 45.45
CDY71492 Canola plasma membrane 41.65 45.39
Os05t0554000-01 Rice cytosol, peroxisome, plasma membrane 39.11 45.34
CDX72778 Canola plasma membrane 46.93 45.21
CDY39617 Canola plasma membrane 45.88 45.21
CDY36531 Canola plasma membrane 45.88 45.21
CDX81701 Canola plasma membrane 45.88 45.21
CDY15087 Canola plasma membrane 45.45 45.17
CDY49220 Canola plasma membrane 46.3 44.97
TraesCSU01G003900.1 Wheat cytosol, plasma membrane, vacuole 46.72 44.74
TraesCS1D01G388600.1 Wheat plasma membrane 46.51 44.72
TraesCS2D01G214300.1 Wheat plasma membrane 45.88 44.65
TraesCS1A01G380900.1 Wheat plasma membrane 46.51 44.62
CDX96304 Canola plasma membrane 46.09 44.58
Zm00001d027921_P002 Maize plasma membrane 46.72 44.56
Os01t0684900-01 Rice plasma membrane 46.09 44.4
EES03448 Sorghum plasma membrane 45.88 44.38
Zm00001d009494_P001 Maize plasma membrane 43.97 44.35
TraesCS2B01G229100.1 Wheat plasma membrane 45.45 44.24
Zm00001d043838_P002 Maize plasma membrane 45.45 44.15
HORVU1Hr1G084190.9 Barley mitochondrion, peroxisome, plasma membrane 45.88 43.75
EER95390 Sorghum plasma membrane 46.51 43.56
CDY52017 Canola plasma membrane 44.19 43.54
Os01t0504500-02 Rice plasma membrane 45.45 42.83
CDY71754 Canola plasma membrane 23.89 42.8
OQU78400 Sorghum cytosol, plasma membrane, vacuole 45.03 42.6
TraesCS2A01G202000.1 Wheat plasma membrane 46.09 42.58
TraesCS1D01G009800.1 Wheat plasma membrane 44.82 42.32
CDY50255 Canola cytosol, peroxisome, vacuole 21.35 42.26
HORVU2Hr1G039850.10 Barley peroxisome, plasma membrane, plastid 44.82 42.06
CDY68867 Canola plasma membrane 41.44 41.88
CDY00530 Canola plasma membrane 42.49 41.53
CDX73002 Canola plasma membrane 35.1 41.5
CDY27066 Canola plasma membrane 42.28 41.07
CDX91652 Canola plasma membrane 42.07 40.95
CDX84324 Canola plasma membrane 41.86 40.91
CDY54775 Canola plasma membrane 42.28 40.9
CDX83993 Canola plasma membrane 37.84 40.87
CDX72467 Canola plasma membrane 42.28 40.82
CDX77471 Canola plasma membrane 34.04 40.76
CDX68215 Canola plasma membrane 29.6 40.46
CDY49289 Canola plasma membrane 41.86 40.33
CDX79559 Canola plasma membrane 41.44 40.25
CDY60134 Canola plasma membrane 40.17 40.17
CDY17238 Canola plasma membrane 42.07 39.1
CDY65688 Canola plasma membrane 29.39 36.48
CDY17027 Canola plasma membrane 28.96 34.25
CDY09031 Canola plasma membrane 34.04 33.89
CDY18116 Canola plasma membrane 34.25 33.61
CDY18118 Canola plasma membrane 30.02 31.56
CDY18117 Canola cytosol, extracellular, plasma membrane 2.11 28.57
HORVU3Hr1G063430.3 Barley plastid 31.08 26.16
CDX84649 Canola vacuole 41.01 20.0
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078DHR8EnsemblPlants:CDX87974ProteinID:CDX87974ProteinID:CDX87974.1GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238
GO:GO:0015297GO:GO:0016020GO:GO:0016021GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00147315001InterPro:MATE_fam
PFAM:PF01554PANTHER:PTHR11206PANTHER:PTHR11206:SF254TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0004EEC5DD
SEG:seg:::::
Description
BnaC03g54220D
Coordinates
chrLK031853:-:971004..973269
Molecular Weight (calculated)
52221.6 Da
IEP (calculated)
8.592
GRAVY (calculated)
0.565
Length
473 amino acids
Sequence
(BLAST)
001: MKTTEAPLLV KNKQQSEEER ERIRWEKMKK VASMAAPMVA VNMSQFLLQA TSTMIVGHRN ELSLAGIALG SSFANVTGFG ILFGLSGALE TLCGQAFGAE
101: QYQKLGPYTF TSMVYLLIIA FPISILWIFM NQILILLHQD PQVAELASVY CLWLIPALFG YSVLESLVRY FQSQSLIFPM VLSSLAALAF HVPLCWLMVH
201: RFEFGVKGAA VSIGISYWLN AVFLWVYMKR SQTCLKTRIY MSKDAFLHTK IFFQFAVPSA MMCCLEWLAF EVITLLSGLL PNSKLETSVI SICLTTSTLH
301: YNLVNGIGDA ASTNVANGLG AGNPRGAHDS ASAAVIIAAV ESVIVSSTLF LSRNVWPYAY SNVEEVTRYV TKMTPILCIS ILMDSFVIVL SGIVRGTGWQ
401: KIGAYVNIAS YYIIGIPIGL LLCFHLHFNG KGLWAGLVSG STLQTLILFL VVGFTNWTKE ANKARERILD EKV
Best Arabidopsis Sequence Match ( AT1G66760.2 )
(BLAST)
001: MKKSIETPLL LNTKQSQDED KEKIRWEKMK KVASMAAPMV AVNMSQYLLQ ATSTMIVGHR SELALAGIAL GSSFANVTGF GVLFGLSGSL ETLCGQAYGA
101: KQYHKLGSYT FTSIVFLLII SVPISILWMF MNQILLLLHQ DPQIAELAGV YCLWLVPALF GYSVLESLVR YFQSQSLIYP MVLSSLAALS FHVPLCWLMV
201: HKFDFGAKGA AASIGISYWL NAVFLWVYMK RSSRCVETRI YMSKDVFVHT NIFFQFAIPS AMMCCLEWLA FEVITLLSGL LPNSKLETSV ISICLTTSSL
301: HYNLVNGIGD AASTNVANEL GAGNPRGARD SAAAAIIIAA VESVIVSSSL FLSRSVWPYA YSNVEEVISY VTDITPILCI SILMDSFLTV LSGIVRGTGW
401: QKIGAYVNIT SYYVIGIPVG LLLCFHLHFN GKGLWAGLVT GSTLQTLILF LVIGFTNWSK EAIKARERIG DEKVWRHDSL LN
Arabidopsis Description
DTX9Protein DETOXIFICATION 9 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9M8]
SUBAcon: [peroxisome,cytosol,plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.