Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: plasma membrane

Predictor Summary:
  • plastid 1
  • plasma membrane 4
  • extracellular 1
  • golgi 1
  • endoplasmic reticulum 1
  • vacuole 1
Predictors GFP MS/MS Papers
Winner Takes All:plasma membrane
Any Predictor:plasma membrane, plastid
BaCelLo:plastid
MultiLoc:plasma membrane
PProwler:secretory
WoLF PSORT:plasma membrane
YLoc:plasma membrane
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY60134 Canola plasma membrane 96.75 81.82
AT1G73700.1 Thale cress plasma membrane 92.0 77.31
CDX68215 Canola plasma membrane 60.5 69.94
CDY68867 Canola plasma membrane 72.75 62.18
CDX72467 Canola plasma membrane 74.75 61.02
CDY49289 Canola plasma membrane 74.5 60.69
CDY00530 Canola plasma membrane 70.0 57.85
CDY54775 Canola plasma membrane 70.0 57.26
CDX84324 Canola plasma membrane 67.25 55.58
CDX91652 Canola plasma membrane 67.25 55.35
CDX79559 Canola plasma membrane 67.25 55.24
CDY27066 Canola plasma membrane 66.75 54.83
CDY17238 Canola plasma membrane 67.0 52.65
VIT_17s0000g02970.t01 Wine grape plasma membrane 62.0 50.3
KRH39120 Soybean plasma membrane 60.75 49.69
VIT_17s0000g02990.t01 Wine grape plasma membrane 60.5 49.29
CDY72452 Canola cytosol, extracellular, mitochondrion 11.25 48.39
PGSC0003DMT400014431 Potato plasma membrane 58.5 47.27
KRH41780 Soybean plasma membrane 56.0 47.16
Solyc03g118970.2.1 Tomato plasma membrane 58.25 47.07
KRH41776 Soybean cytosol, peroxisome, plasma membrane 58.5 46.99
KRH39118 Soybean endoplasmic reticulum, golgi, plasma membrane 54.5 45.99
KRH39117 Soybean golgi, plasma membrane 50.0 45.05
KRH48598 Soybean plasma membrane 52.0 44.54
KRH48596 Soybean plasma membrane 51.25 43.71
KRH48599 Soybean vacuole 45.5 43.13
CDX83993 Canola plasma membrane 44.25 40.41
CDX81701 Canola plasma membrane 47.25 39.38
CDY72127 Canola plasma membrane 31.0 38.99
CDY52017 Canola plasma membrane 46.75 38.96
CDY71492 Canola plasma membrane 42.25 38.94
CDY36531 Canola plasma membrane 46.5 38.75
CDY65688 Canola plasma membrane 36.75 38.58
CDY39617 Canola plasma membrane 46.25 38.54
CDX72778 Canola plasma membrane 47.0 38.29
CDX96304 Canola plasma membrane 46.75 38.24
CDY67968 Canola plasma membrane 45.25 37.4
CDY21736 Canola plasma membrane 44.0 36.97
CDX68324 Canola plasma membrane 44.5 36.55
CDY49220 Canola plasma membrane 44.5 36.55
CDX81843 Canola plasma membrane 43.25 36.34
CDY15087 Canola plasma membrane 43.0 36.13
CDY50254 Canola plasma membrane 43.5 36.02
CDY27886 Canola plasma membrane 43.5 36.02
CDX96130 Canola plasma membrane 41.75 35.38
CDX87974 Canola cytosol, peroxisome, plasma membrane 41.5 35.1
CDY12351 Canola cytosol, peroxisome, plasma membrane 41.5 34.44
CDY17027 Canola plasma membrane 33.5 33.5
CDY09031 Canola plasma membrane 39.75 33.47
CDY36231 Canola plasma membrane 38.0 33.41
CDY36229 Canola plasma membrane 41.25 33.4
CDX86801 Canola plasma membrane 41.75 33.33
CDY18116 Canola plasma membrane 40.0 33.2
CDY13241 Canola plasma membrane 41.5 32.87
CDX77471 Canola plasma membrane 32.0 32.41
CDX96129 Canola plasma membrane 41.75 32.24
CDY18118 Canola plasma membrane 36.25 32.22
CDY18117 Canola cytosol, extracellular, plasma membrane 2.75 31.43
CDY36230 Canola plasma membrane 42.0 31.34
CDY50255 Canola cytosol, peroxisome, vacuole 17.0 28.45
CDX84649 Canola vacuole 67.25 27.73
CDY71754 Canola plasma membrane 18.25 27.65
Protein Annotations
MapMan:24.2.4.1.1GO:A0A078C821EnsemblPlants:CDX73002ProteinID:CDX73002ProteinID:CDX73002.1GO:GO:0003674
GO:GO:0005215GO:GO:0005575GO:GO:0006810GO:GO:0006855GO:GO:0008150GO:GO:0015238
GO:GO:0015297GO:GO:0016020GO:GO:0055085EnsemblPlantsGene:GSBRNA2T00103441001InterPro:MATE_famPFAM:PF01554
PANTHER:PTHR11206PANTHER:PTHR11206:SF198TIGRFAMs:TIGR00797TMHMM:TMhelixUniParc:UPI0004EE9EB1SEG:seg
Description
BnaC06g34500D
Coordinates
chrLK031797:-:1616209..1618401
Molecular Weight (calculated)
43115.6 Da
IEP (calculated)
8.876
GRAVY (calculated)
0.743
Length
400 amino acids
Sequence
(BLAST)
001: MIITNLGTAS ALETLCGQAY GAKLYGKLGI QMQRAMFVLL LLSIPLSVIW FNTERILVLV HQNKDISSVA GSYARYMIPS LFAYGLLQCI NRFLQAQNNV
101: FPVFVCSGIT TGLHLLLCWL FVLKTSLGYR GAALAISISY WFNVILLSCY VKFSASCSHS WKGFSKEAFH EIYDFSKIAF PSAVMVCLEL WSFELLVLAS
201: GLLPNPVLET SVLSICLNTS LTIWQVSVGL GGAASIRVSN ELGAGNPQVA KLAVYVIVGI AVAEGIVVVT VLLSVRKVLG RAFSSDPKII AYAASMIPIV
301: ACGNFLDGLQ CVLSGVARGC GWQKIGACIN LGSYYLVGVP LGLVLGFHFH IGGRGLWLGI VTALAVQVLG LSLVTIFTNW DKEAKKATNR VGDKDDTIPR
Best Arabidopsis Sequence Match ( AT1G73700.1 )
(BLAST)
001: MEDGVTPPLL ITEKDTTMIR VKEEVKKQLW LSAPLIGVSL LQYSLQVISV MFVGHLGSLP LSAASIATSF ASVTGFTFLL GTASALETLC GQAYGAKLYG
101: KLGIQMQRAM FVLLILSVPL SIIWANTEQI LVLVHQDKSI ASVAGSYAKY MIPSLFAYGL LQCINRFLQA QNNVFPVFVC SGITTCLHLL LCWLFVLKTG
201: LGYRGAALAI SVSYWFNVIL LSCYVKFSPS CSHSWTGFSK EAFQELYDFS KIAFPSAVMV CLELWSFELL VLASGLLPNP VLETSVLSIC LNTSLTIWQI
301: SVGLGGAASI RVSNELGAGN PQVAKLAVYV IVGIAVAEGI VVVTVLLSIR KILGHAFSSD PKIIAYAASM IPIVACGNFL DGLQCVLSGV ARGCGWQKIG
401: ACVNLGSYYL VGVPLGLLLG FHFHIGGRGL WLGIVTALSV QVLCLSLVTI FTNWDKEAKK ATNRVGSSDD KDGDVQ
Arabidopsis Description
DTX17Protein DETOXIFICATION 17 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9U1]
SUBAcon: [plasma membrane]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.